CK934618

Overview
NameCK934618
Unique NameCK934618
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length517
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK934618 vs. ExPASy Swiss-Prot
Match: R13L1_ARATH (Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.525e-11
Identity = 40/93 (43.01%), Postives = 55/93 (59.14%), Query Frame = 3 
Query:   24 MSIIGEAILMASVEMLINKLASEGLRLFARQGRIQANLV-KWKKMLEMIKAVLDDAEEKKTTNRSVKKWLGELQNLAYDVEDLLDEFETEAFR 299
            M+ IGE  L A ++ L   L SE  R F ++  +  NL+ +    L  I AVL DAEEK+ TN  V+KW+ EL+++ Y  ED LD+  TEA R
Sbjct:    1 MTGIGEMFLAAFLQALFQTLVSEPFRSFFKRRELNENLLERLSTALLTITAVLIDAEEKQITNPVVEKWVNELRDVVYHAEDALDDIATEALR 93
The following BLAST results are available for this feature:
BLAST of CK934618 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
R13L1_ARATH1.525e-1143.01Putative disease resistance RPP13-like protein 1 O... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004228_H12 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IIIF_H12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934618 ID=CK934618; Name=CK934618; organism=Citrus sinensis; type=EST; length=517bp
GGGGAAACCCAAAAAAAAAAAAAATGTCCATCATCGGAGAGGCAATCCTG
ATGGCGTCCGTTGAGATGCTGATCAATAAGTTAGCTTCAGAGGGGCTTCG
TTTATTTGCACGCCAAGGTCGAATCCAAGCAAATCTAGTGAAGTGGAAGA
AGATGTTGGAGATGATCAAGGCGGTGCTTGATGATGCTGAGGAGAAGAAG
ACGACTAATCGGTCTGTGAAGAAGTGGCTTGGCGAGCTTCAGAACTTGGC
TTATGATGTTGAAGACTTGTTGGATGAGTTCGAAACTGAGGCTTTCCGGA
GGAAGTTGCTGCTTGGAAATGGAGAACCAGCTGCTGCTCATGATCAACCC
AGCAGCAGTCGTACAAGATCAAGTAAGTTTCGGAAGCTCATTCCTACTTG
CTGCACCACTTTTACTCCACAATCGATCCAGTTCGATTACGCCATGATGT
CCAAAATCAAAGGGGTCAACGACAGATTTCAAGATATTGAAAAAAAAAAA
AAAAAAAAAAAAAAAAA
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