CK934620

Overview
NameCK934620
Unique NameCK934620
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length754
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK934620_ssr85 microsatellite CK934620_ssr85:85..94. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CK934620 vs. ExPASy Swiss-Prot
Match: MTDH_MEDSA (Probable mannitol dehydrogenase OS=Medicago sativa GN=CAD1 PE=1 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 4.079e-86
Identity = 150/217 (69.12%), Postives = 167/217 (76.96%), Query Frame = 1
Query:  100 MAKSPETEQPQKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXNGKAFGLKVTVISTSP 750
            MAKSPETE P KA GWAARD +GT SPFHFSRRE G DDV++KIL+CG+CHSDLH  +N+WG T YP+VPGHEIVG VTKVG NV KF+ GD VGVGV+V SCQ CE+C Q LE YCP  + TYNS    GT+TYGGYSD +VV Q YV++FPDN+PLDAGAPLLCAGITVYSPMKYYGMTEP                   GKAFGLKVTVISTSP
Sbjct:    1 MAKSPETELPLKAFGWAARDTSGTLSPFHFSRRENGDDDVSVKILYCGVCHSDLHTLKNDWGFTTYPVVPGHEIVGVVTKVGINVKKFRVGDNVGVGVIVESCQTCENCNQDLEQYCPKPVFTYNS-PYKGTRTYGGYSDFVVVHQRYVVQFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAIKFGKAFGLKVTVISTSP 216          
BLAST of CK934620 vs. ExPASy Swiss-Prot
Match: CADH9_ARATH (Probable cinnamyl alcohol dehydrogenase 9 OS=Arabidopsis thaliana GN=CAD9 PE=1 SV=2)

HSP 1 Score: 314.309 bits (804), Expect = 4.510e-85
Identity = 145/216 (67.13%), Postives = 165/216 (76.39%), Query Frame = 1
Query:  100 MAKSPETEQPQKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXNGKAFGLKVTVISTS 747
            MAKSPETE P K  GW ARD +G  SPFHFSRR+ G +DVT+KILFCG+CH+DLH  +N+WG + YP+VPGHEIVG  TKVG NV+KFKEGD+VGVGV+  SCQ CESC Q LENYCP M  TYN+I  DGTK YGGYS+ IVVDQ +VLRFP+N+P D+GAPLLCAGITVYSPMKYYGMTE                    GKAFGLKVTVIS+S
Sbjct:    1 MAKSPETEHPNKVFGWGARDKSGVLSPFHFSRRDNGENDVTVKILFCGVCHTDLHTIKNDWGYSYYPVVPGHEIVGIATKVGKNVTKFKEGDRVGVGVISGSCQSCESCDQDLENYCPQMSFTYNAIGSDGTKNYGGYSENIVVDQRFVLRFPENLPSDSGAPLLCAGITVYSPMKYYGMTEAGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSS 216          
BLAST of CK934620 vs. ExPASy Swiss-Prot
Match: MTDH1_STYHU (Probable mannitol dehydrogenase 1 OS=Stylosanthes humilis GN=CAD1 PE=2 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 9.732e-80
Identity = 138/206 (66.99%), Postives = 161/206 (78.16%), Query Frame = 1
Query:  133 KAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXNGKAFGLKVTVISTSP 750
            KA GWAA+D +G  SPFHF+RR+  ADDVT+KIL+CG+CHSDLH  +N+WG T YP+VPGHEI G VTKVG+NV+KFKEGD+VGVGV+V SCQ+CE CQQ LE+YCP  + TYNS    GT+T GGYSD +VV Q +VL+FPDN+PLDAGAPLLCAGITVYSPMKYYGMTEP                   GKAFGLKVTVIS+SP
Sbjct:    5 KAFGWAAKDASGHLSPFHFTRRQNEADDVTLKILYCGVCHSDLHTVKNDWGFTTYPVVPGHEIAGIVTKVGSNVTKFKEGDRVGVGVIVDSCQECECCQQDLESYCPKPVFTYNS-PYKGTRTQGGYSDFVVVHQRFVLQFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAIKFGKAFGLKVTVISSSP 209          
BLAST of CK934620 vs. ExPASy Swiss-Prot
Match: GEDH1_OCIBA (Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GEDH1 PE=1 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.554e-77
Identity = 134/216 (62.04%), Postives = 161/216 (74.54%), Query Frame = 1
Query:  100 MAKSPETEQPQKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXNGKAFGLKVTVISTS 747
            MAKSPETE P KA+GWAA DN+GTFSPF+FSRR TG  DV  ++L+CG+CHSDLH  +NEWGVT+YPIVPGHEIVG VT+VG+ V K K GDKVGVGVLV SC++C+ C   LENYC   ILTY +   DGT   GGYSD++V D+H+++R+P+N PLDAGAPLLCAGIT YSP+KY+G+ +P                    KAFG KVTVISTS
Sbjct:    1 MAKSPETEHPVKALGWAATDNSGTFSPFNFSRRATGERDVQFRVLYCGVCHSDLHMVKNEWGVTHYPIVPGHEIVGIVTEVGSKVEKVKIGDKVGVGVLVGSCRQCDQCSNDLENYCYKQILTYGAPYLDGTIARGGYSDIMVADEHFIIRWPENFPLDAGAPLLCAGITTYSPLKYFGLDKPGLRVGVNGLGGLGHVAVKFAKAFGTKVTVISTS 216          
BLAST of CK934620 vs. ExPASy Swiss-Prot
Match: CADH3_ARATH (Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis thaliana GN=CAD3 PE=1 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 3.827e-76
Identity = 132/206 (64.08%), Postives = 152/206 (73.79%), Query Frame = 1
Query:  133 KAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMT-EPXXXXXXXXXXXXXXXXXXNGKAFGLKVTVISTS 747
            +A GWAA D +G  SPFHFSRRE G +DVT+KILFCG+CHSDLH  +N WG + YPI+PGHEIVG  TKVG NV+KFKEGD+VGVGV++ SCQ CESC Q LENYCP ++ TYNS   DGT+  GGYSD+IVVD  +VL  PD +P D+GAPLLCAGITVYSPMKYYGMT E                    GKAFGL+VTVIS S
Sbjct:    6 RAFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRS 211          
BLAST of CK934620 vs. ExPASy Swiss-Prot
Match: MTDH_MESCR (Probable mannitol dehydrogenase OS=Mesembryanthemum crystallinum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 8.526e-76
Identity = 132/214 (61.68%), Postives = 154/214 (71.96%), Query Frame = 1
Query:  109 SPETEQPQKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXNGKAFGLKVTVISTSP 750
            +PE   PQKA GWAARD +GT SP  FSRR TG  DVT K+L+CGICHSDLH  +NEWG   YP +PGHEIVG VT+VGN V  FK GDKVGVG +V SC+ CESC+  LENYCP MILTY S   DGT TYGGYSD++VV++H+ +R PDNM LDA APLLCAG+TVYSP+K++ + +P                   GKAFG KVTVISTSP
Sbjct:    5 APENVHPQKAFGWAARDTSGTLSPLKFSRRATGEQDVTFKVLYCGICHSDLHYIKNEWGNAVYPAIPGHEIVGVVTEVGNKVQNFKVGDKVGVGCMVGSCRSCESCENHLENYCPKMILTYGSTYYDGTLTYGGYSDIMVVEEHFAVRIPDNMALDATAPLLCAGVTVYSPLKHFELDKPGLHIGVVGLGGLGHMAVKFGKAFGAKVTVISTSP 218          
BLAST of CK934620 vs. ExPASy Swiss-Prot
Match: CADH2_ARATH (Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis thaliana GN=CAD2 PE=1 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 4.231e-75
Identity = 133/207 (64.25%), Postives = 152/207 (73.43%), Query Frame = 1
Query:  133 KAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGT-KTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMT-EPXXXXXXXXXXXXXXXXXXNGKAFGLKVTVISTS 747
            KA GWAA D +G  SPFHFSRRE G +DVT+KILFCG+CHSDLH  +N WG + YPI+PGHEIVG  TKVG NV+KFKEGD+VGVGV++ SCQ CESC Q LENYCP ++ TYNS   DGT +  GGYSD+IVVD  +VL  PD +P D+GAPLLCAGITVYSPMKYYGMT E                    GKAFGL+VTVIS S
Sbjct:    6 KAFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTSRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRS 212          
BLAST of CK934620 vs. ExPASy Swiss-Prot
Match: MTDH_FRAAN (Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 7.980e-74
Identity = 125/213 (58.69%), Postives = 155/213 (72.77%), Query Frame = 1
Query:  115 ETEQPQKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXNGKAFGLKVTVISTSPK 753
            E E  +KA GWAARD++G  SPF+F RRETG  DVT K+L+CGICHSDLH  +NEWG + YP+VPGHEIVG VT+VG+ V KFK GD+VGVG +V SC+ CE+C   LENYCP  ILTY +   DG+ TYGGYSD++V D+H+++R PDN+PLD  APLLCAGIT YSP++Y+G+ +P                    KA G+KVTVISTSPK
Sbjct:    4 EQEHRKKASGWAARDSSGVLSPFNFYRRETGEKDVTFKVLYCGICHSDLHMVKNEWGFSTYPLVPGHEIVGEVTEVGSKVQKFKVGDRVGVGCIVGSCRSCENCTDHLENYCPKQILTYGAKYYDGSTTYGGYSDIMVADEHFIVRIPDNLPLDGAAPLLCAGITTYSPLRYFGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPK 216          
BLAST of CK934620 vs. ExPASy Swiss-Prot
Match: CADH3_ORYSJ (Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza sativa subsp. japonica GN=CAD3 PE=2 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 3.960e-73
Identity = 127/216 (58.80%), Postives = 156/216 (72.22%), Query Frame = 1
Query:  103 AKSPETEQPQKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXNGKAFGLKVTVISTSP 750
            A S    + Q+A+G AARD++G  SPF  SRR TG DDV IKILFCGICHSDLHC +NEW  + YP+VPGHEI G VT+VG NV++FK GD+VGVG +V SC+ CESC  G EN+CP  + TYNS+D+DGT TYGGYS ++VV + +V+ FP+ MPLD GAPLLCAGITVY+PMKY+G+  P                    +AFGLKVTVIS+SP
Sbjct:    5 AASAAAGEEQQAVGLAARDSSGHLSPFAISRRSTGDDDVAIKILFCGICHSDLHCIKNEWKHSIYPLVPGHEIAGVVTEVGKNVTRFKAGDRVGVGCMVNSCRSCESCNNGFENHCPEGVFTYNSVDKDGTVTYGGYSSMVVVHERFVVMFPEAMPLDVGAPLLCAGITVYTPMKYHGLNAPGKHVGVLGLGGLGHVAVKFARAFGLKVTVISSSP 220          
BLAST of CK934620 vs. ExPASy Swiss-Prot
Match: MTDH_APIGR (Mannitol dehydrogenase OS=Apium graveolens GN=MTD PE=1 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 2.838e-71
Identity = 127/216 (58.80%), Postives = 148/216 (68.52%), Query Frame = 1
Query:  100 MAKSPETEQPQKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXNGKAFGLKVTVISTS 747
            MAKS E E P KA GWAARD TG  SPF FSRR TG  DV +K+LFCG+CHSD H   N WG T YPIVPGHEIVG VT+VG+ V K K GD VG+G LV SC+ CESC    E++C N I TY SI  DGT T+GGYSD +V D+H++LR+P N+PLD+GAPLLCAGIT YSP+KYYG+ +P                    KAFG +VTVI  S
Sbjct:    1 MAKSSEIEHPVKAFGWAARDTTGLLSPFKFSRRATGEKDVRLKVLFCGVCHSDHHMIHNNWGFTTYPIVPGHEIVGVVTEVGSKVEKVKVGDNVGIGCLVGSCRSCESCCDNRESHCENTIDTYGSIYFDGTMTHGGYSDTMVADEHFILRWPKNLPLDSGAPLLCAGITTYSPLKYYGLDKPGTKIGVVGLGGLGHVAVKMAKAFGAQVTVIDIS 216          
The following BLAST results are available for this feature:
BLAST of CK934620 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
MTDH_MEDSA4.079e-8669.12Probable mannitol dehydrogenase OS=Medicago sativa... [more]
CADH9_ARATH4.510e-8567.13Probable cinnamyl alcohol dehydrogenase 9 OS=Arabi... [more]
MTDH1_STYHU9.732e-8066.99Probable mannitol dehydrogenase 1 OS=Stylosanthes ... [more]
GEDH1_OCIBA1.554e-7762.04Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GE... [more]
CADH3_ARATH3.827e-7664.08Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis th... [more]
MTDH_MESCR8.526e-7661.68Probable mannitol dehydrogenase OS=Mesembryanthemu... [more]
CADH2_ARATH4.231e-7564.25Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis th... [more]
MTDH_FRAAN7.980e-7458.69Probable mannitol dehydrogenase OS=Fragaria ananas... [more]
CADH3_ORYSJ3.960e-7358.80Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza... [more]
MTDH_APIGR2.838e-7158.80Mannitol dehydrogenase OS=Apium graveolens GN=MTD ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004228_G07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IIIF_G07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934620 ID=CK934620; Name=CK934620; organism=Citrus sinensis; type=EST; length=754bp
GGGGGCCTCAGAAATCACAAGCCAGCTTCTTCTATCATTATTACGCACAT
TTCATTGTTTAAGTGAGAGTGAAGGATAAAGGCCAGAGAGAGAGAAAGCA
TGGCAAAATCACCAGAAACAGAGCAGCCTCAAAAGGCCATTGGTTGGGCT
GCCAGAGACAACACTGGAACCTTCTCCCCATTCCATTTCTCCAGAAGAGA
AACTGGTGCTGATGATGTAACTATTAAGATCCTCTTTTGTGGGATTTGCC
ACTCGGACTTGCATTGTGCCAGAAATGAATGGGGTGTCACCAATTACCCA
ATTGTTCCCGGGCATGAAATTGTTGGTACTGTGACAAAAGTTGGAAATAA
CGTGTCAAAATTCAAAGAGGGTGACAAGGTTGGAGTTGGGGTCTTGGTAG
CCTCCTGCCAAAAATGTGAAAGCTGTCAGCAGGGCTTGGAGAATTACTGT
CCTAATATGATACTTACATATAACTCCATTGATCGTGATGGAACAAAAAC
TTATGGTGGTTACTCAGATCTGATTGTTGTTGATCAGCATTATGTGCTCC
GCTTTCCTGACAACATGCCTCTTGATGCGGGTGCACCACTTTTGTGTGCG
GGGATCACAGTGTACAGCCCAATGAAATATTATGGAATGACTGAGCCAGG
CAAGCATTTGGGTGTAGCAGGACTTGGTGGGCTTGGCCATGTTGCTGTGA
AAAATGGCAAGGCCTTTGGGTTGAAAGTCACCGTCATCAGTACTTCTCCG
AAAA
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