CK934696

Overview
NameCK934696
Unique NameCK934696
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8093 contig Csv1_Contig8093:1211..1936. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934696 vs. ExPASy Swiss-Prot
Match: TDT_ARATH (Tonoplast dicarboxylate transporter OS=Arabidopsis thaliana GN=TDT PE=2 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 1.993e-57
Identity = 97/124 (78.23%), Postives = 109/124 (87.90%), Query Frame = 1
Query:   82 KSIGFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAAMAFLMPTLGAYVFGTDGDV 453
            K + FLE APY AIAP VCLI+A ITEFTSNNATTTL++PLLI+IAK M +HPLLLMVPGAIGAQF+FLLPTGTPSN+VGFTTGHIEI+DMIKTGLPLKIAG   ++ LMPTLGAYVF + G V
Sbjct:  417 KGLVFLETAPYWAIAPTVCLIAATITEFTSNNATTTLLVPLLIEIAKNMGIHPLLLMVPGAIGAQFAFLLPTGTPSNVVGFTTGHIEIKDMIKTGLPLKIAGTIFLSILMPTLGAYVFASMGGV 540          

HSP 2 Score: 48.1358 bits (113), Expect = 1.993e-57
Identity = 24/28 (85.71%), Postives = 26/28 (92.86%), Query Frame = 2
Query:    8 IILLLGAGFAIADGVRTSGLADDLSKAL 91
            I+LLLGAGFAIADGVRTSGLA+ LSK L
Sbjct:  392 IVLLLGAGFAIADGVRTSGLAEVLSKGL 419          
BLAST of CK934696 vs. ExPASy Swiss-Prot
Match: S13A3_MOUSE (Solute carrier family 13 member 3 OS=Mus musculus GN=Slc13a3 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 8.461e-25
Identity = 45/113 (39.82%), Postives = 72/113 (63.72%), Query Frame = 1
Query:   97 LEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAAMAFLMPTLGAYVF 435
            LE  P L    ++ ++ A  TEF SN AT  + LP+L ++A  +HVHPL LM+PG +G  ++F+LP  TP N + F+TGH+ ++DM++TGL + + G+  ++  M T    +F
Sbjct:  457 LEHVPPLLAVLLITVVIAFFTEFASNTATIIIFLPVLAELAIRLHVHPLYLMIPGTVGCSYAFMLPVSTPPNSIAFSTGHLLVKDMVRTGLLMNLMGVLLLSLAMNTWAQTIF 569          

HSP 2 Score: 29.6462 bits (65), Expect = 8.461e-25
Identity = 14/21 (66.67%), Postives = 16/21 (76.19%), Query Frame = 2
Query:    8 IILLLGAGFAIADGVRTSGLA 70
            IILLLG GFA+A G   SGL+
Sbjct:  427 IILLLGGGFAMAKGCEESGLS 447          
BLAST of CK934696 vs. ExPASy Swiss-Prot
Match: S13A3_RAT (Solute carrier family 13 member 3 OS=Rattus norvegicus GN=Slc13a3 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 4.109e-24
Identity = 44/113 (38.94%), Postives = 71/113 (62.83%), Query Frame = 1
Query:   97 LEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAAMAFLMPTLGAYVF 435
            LE  P L    ++ ++ A  TEF SN AT  + LP+L ++A  +HVHPL LM+PG +   ++F+LP  TP N + F+TGH+ ++DM++TGL + + G+  ++  M T    +F
Sbjct:  457 LEHVPPLLAVLLITVVIAFFTEFASNTATIIIFLPVLAELAIRLHVHPLYLMIPGTVSCSYAFMLPVSTPPNSIAFSTGHLLVKDMVRTGLLMNLMGVLLLSLAMNTWAQAIF 569          

HSP 2 Score: 29.6462 bits (65), Expect = 4.109e-24
Identity = 14/21 (66.67%), Postives = 16/21 (76.19%), Query Frame = 2
Query:    8 IILLLGAGFAIADGVRTSGLA 70
            IILLLG GFA+A G   SGL+
Sbjct:  427 IILLLGGGFAMAKGCEESGLS 447          
BLAST of CK934696 vs. ExPASy Swiss-Prot
Match: S13A5_RAT (Solute carrier family 13 member 5 OS=Rattus norvegicus GN=Slc13a5 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.598e-23
Identity = 47/108 (43.52%), Postives = 69/108 (63.89%), Query Frame = 1
Query:  121 IAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAAMAFLMPTLGAYVFGTD 444
            I  I+  I A+ TE TSN ATTTL LP+   +A+++ +HPL +M+P  + A  +F+LP  TP N + F  GH+++ DM+KTGL + I GIA++   + T G  VF  D
Sbjct:  452 ITLILSCIVAMTTECTSNVATTTLFLPIFASMARSIGIHPLYVMIPCTLSASLAFMLPVATPPNAIVFAYGHLKVIDMVKTGLVMNILGIASVFLSVNTWGRAVFNLD 559          

HSP 2 Score: 33.8834 bits (76), Expect = 2.598e-23
Identity = 14/29 (48.28%), Postives = 23/29 (79.31%), Query Frame = 2
Query:    8 IILLLGAGFAIADGVRTSGLADDLSKALD 94
            I+LLLG GFA+A G  TSGL++ +++ ++
Sbjct:  414 IVLLLGGGFAMAKGCETSGLSEWMARQME 442          
BLAST of CK934696 vs. ExPASy Swiss-Prot
Match: S13A3_HUMAN (Solute carrier family 13 member 3 OS=Homo sapiens GN=SLC13A3 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 4.395e-23
Identity = 43/113 (38.05%), Postives = 69/113 (61.06%), Query Frame = 1
Query:   97 LEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAAMAFLMPTLGAYVF 435
            LE  P      ++ ++ A  TEF SN AT  + LP+L ++A  + VHPL LM+PG +G  F+F+LP  TP N + F +GH+ ++DM++TGL + + G+  ++  M T    +F
Sbjct:  459 LENVPPALAVLLITVVIAFFTEFASNTATIIIFLPVLAELAIRLRVHPLYLMIPGTVGCSFAFMLPVSTPPNSIAFASGHLLVKDMVRTGLLMNLMGVLLLSLAMNTWAQTIF 571          

HSP 2 Score: 29.6462 bits (65), Expect = 4.395e-23
Identity = 14/21 (66.67%), Postives = 16/21 (76.19%), Query Frame = 2
Query:    8 IILLLGAGFAIADGVRTSGLA 70
            IILLLG GFA+A G   SGL+
Sbjct:  429 IILLLGGGFAMAKGCEESGLS 449          
BLAST of CK934696 vs. ExPASy Swiss-Prot
Match: S13A4_HUMAN (Solute carrier family 13 member 4 OS=Homo sapiens GN=SLC13A4 PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 6.103e-22
Identity = 41/116 (35.34%), Postives = 72/116 (62.07%), Query Frame = 1
Query:   97 LEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAAMAFLMPTLGAYVFGTD 444
            L + P  A+  + C++ +I+TEF SN AT T+ LP+L  +++T+H++PL  ++P  +   F+ +LP G P N + F+ GH +I+DM+K GL + + G+  +   + T G  +F  D
Sbjct:  496 LSSLPPWAVTLLACILVSIVTEFVSNPATITIFLPILCSLSETLHINPLYTLIPVTMCISFAVMLPVGNPPNAIVFSYGHCQIKDMVKAGLGVNVIGLVIVMVAINTWGVSLFHLD 611          

HSP 2 Score: 30.0314 bits (66), Expect = 6.103e-22
Identity = 11/22 (50.00%), Postives = 19/22 (86.36%), Query Frame = 2
Query:    5 EIILLLGAGFAIADGVRTSGLA 70
            EI++L+G G+A+A G ++SGL+
Sbjct:  465 EIVILVGGGYALASGSKSSGLS 486          
BLAST of CK934696 vs. ExPASy Swiss-Prot
Match: S13A5_MOUSE (Solute carrier family 13 member 5 OS=Mus musculus GN=Slc13a5 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.854e-21
Identity = 43/103 (41.75%), Postives = 65/103 (63.11%), Query Frame = 1
Query:  136 CLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAAMAFLMPTLGAYVFGTD 444
            CL+ A+ TE TSN ATTTL LP+   +A+++ +HPL +M+P  + A  +F+LP  TP N + F  GH+ + DM+KTGL +   GI ++   + T G  +F  D
Sbjct:  458 CLV-AMTTECTSNVATTTLFLPIFASMARSIGIHPLYVMIPCTMSASLAFMLPVATPPNAIVFAYGHLRVVDMMKTGLIMNFVGILSVFLSVNTWGRAMFNLD 559          

HSP 2 Score: 33.113 bits (74), Expect = 3.854e-21
Identity = 15/33 (45.45%), Postives = 23/33 (69.70%), Query Frame = 2
Query:    5 EIILLLGAGFAIADGVRTSGLADDLSKALDSWR 103
            +I+LLLG GFA+A G  TSGL+  ++  ++  R
Sbjct:  413 DIVLLLGGGFAMAKGCETSGLSKWMAAQMEPLR 445          
BLAST of CK934696 vs. ExPASy Swiss-Prot
Match: S13A2_RAT (Solute carrier family 13 member 2 OS=Rattus norvegicus GN=Slc13a2 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.866e-20
Identity = 46/116 (39.66%), Postives = 69/116 (59.48%), Query Frame = 1
Query:   97 LEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAAMAFLMPTLGAYVFGTD 444
            L+  P  A A I+CL+ AI TE TSN ATTTL LP+L  +A+ + +HPL +M+P  + A  +F+LP  TP N + F+ G +++ DM + G  L I G+ A    + +    +F  D
Sbjct:  446 LQHIPPSATAVILCLLIAIFTECTSNVATTTLFLPILASMAQAICLHPLYVMLPCTLAASLAFMLPVATPPNAIVFSFGGLKVSDMARAGFLLNIIGVLATTLSINSWSIPIFKLD 561          

HSP 2 Score: 30.0314 bits (66), Expect = 1.866e-20
Identity = 14/28 (50.00%), Postives = 19/28 (67.86%), Query Frame = 2
Query:    8 IILLLGAGFAIADGVRTSGLADDLSKAL 91
            I++LLG GFA+A G   SGL++ L   L
Sbjct:  416 IVILLGGGFALAKGSEQSGLSEWLGDKL 443          
BLAST of CK934696 vs. ExPASy Swiss-Prot
Match: S13A5_HUMAN (Solute carrier family 13 member 5 OS=Homo sapiens GN=SLC13A5 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.761e-20
Identity = 47/116 (40.52%), Postives = 74/116 (63.79%), Query Frame = 1
Query:   97 LEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAAMAFLMPTLGAYVFGTD 444
            L A P  AI  I+ L+ A+ TE TSN ATTTL LP+   +++++ ++PL +M+P  + A F+F+LP  TP N + FT GH+++ DM+KTG+ + I G+  +   + T G  +F  D
Sbjct:  440 LHAVPPAAITLILSLLVAVFTECTSNVATTTLFLPIFASMSRSIGLNPLYIMLPCTLSASFAFMLPVATPPNAIVFTYGHLKVADMVKTGVIMNIIGVFCVFLAVNTWGRAIFDLD 555          
BLAST of CK934696 vs. ExPASy Swiss-Prot
Match: YKG6_CAEEL (Uncharacterized transporter B0285.6 OS=Caenorhabditis elegans GN=B0285.6 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 5.341e-20
Identity = 38/109 (34.86%), Postives = 66/109 (60.55%), Query Frame = 1
Query:  109 PYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAAMAFLMPTLGAYVF 435
            P+  +  I+ ++  ++TEF++N+AT ++ +P+  ++A+ +  HPL   +P AIG  FSF+LP  TP+N + + T  I + DM+  G+ L I  IA  A  M T   ++F
Sbjct:  445 PFFVMQIILSIVVVVMTEFSTNSATASIFIPISFKMAEAVGAHPLYFSIPTAIGPSFSFMLPMATPANAIVYETKTIRMIDMVSCGVFLNIFCIAITAINMNTWAFWLF 553          

HSP 2 Score: 38.1206 bits (87), Expect = 5.341e-20
Identity = 19/30 (63.33%), Postives = 25/30 (83.33%), Query Frame = 2
Query:    8 IILLLGAGFAIADGVRTSGLADDLSKALDS 97
            IILLLGAGFAI+D VR SGL+  ++ +L+S
Sbjct:  410 IILLLGAGFAISDAVRVSGLSSLIACSLNS 439          
The following BLAST results are available for this feature:
BLAST of CK934696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
TDT_ARATH1.993e-5778.23Tonoplast dicarboxylate transporter OS=Arabidopsis... [more]
S13A3_MOUSE8.461e-2539.82Solute carrier family 13 member 3 OS=Mus musculus ... [more]
S13A3_RAT4.109e-2438.94Solute carrier family 13 member 3 OS=Rattus norveg... [more]
S13A5_RAT2.598e-2343.52Solute carrier family 13 member 5 OS=Rattus norveg... [more]
S13A3_HUMAN4.395e-2338.05Solute carrier family 13 member 3 OS=Homo sapiens ... [more]
S13A4_HUMAN6.103e-2235.34Solute carrier family 13 member 4 OS=Homo sapiens ... [more]
S13A5_MOUSE3.854e-2141.75Solute carrier family 13 member 5 OS=Mus musculus ... [more]
S13A2_RAT1.866e-2039.66Solute carrier family 13 member 2 OS=Rattus norveg... [more]
S13A5_HUMAN2.761e-2040.52Solute carrier family 13 member 5 OS=Homo sapiens ... [more]
YKG6_CAEEL5.341e-2034.86Uncharacterized transporter B0285.6 OS=Caenorhabdi... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004227_H03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IIF_H03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934696 ID=CK934696; Name=CK934696; organism=Citrus sinensis; type=EST; length=725bp
GGGGGAAATTATATTGCTTTTAGGGGCTGGCTTTGCTATAGCCGATGGAG
TCAGGACTAGCGGTCTTGCTGATGATCTGTCAAAAGCATTGGATTCCTGG
AGGCGGCGCCATATTTAGCCATTGCACCTATCGTATGTCTGATTAGCGCG
ATTATTACTGAATTCACATCAAATAATGCCACAACAACTCTCGTTCTTCC
ACTTCTGATCCAAATAGCAAAAACTATGCATGTTCATCCATTGCTTCTTA
TGGTTCCTGGAGCAATTGGAGCACAATTTTCTTTCTTGTTGCCGACTGGA
ACCCCTTCAAATATTGTTGGATTCACAACCGGGCACATCGAAATTCAAGA
TATGATCAAGACAGGGCTGCCCCTTAAGATTGCTGGCATTGCTGCTATGG
CCTTTCTAATGCCTACACTTGGTGCTTATGTTTTTGGGACAGATGGGGAT
GTTCAGTAGCTGCAAACTCTTGTAAACTGTGGAGGTTTCTCTCAATCAAG
TCTCCGTAACAGGCATTGGGGGACCCTGAATAGGAATTATAGCAATGCTA
GTGTTTGCACACCATATTGAGTTTTTCCTATAAGAAAAGACGCCTATTGT
ATATTTGCGTGCCTAATGAATGCTTCCCTTAGTGGTTAGCACAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGAA
AAAAAAAAAAAAAAAAAAAAAAAAA
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