CK934708

Overview
NameCK934708
Unique NameCK934708
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1716 contig Csv1_Contig1716:1..835. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934708 vs. ExPASy Swiss-Prot
Match: EIN3_ARATH (Protein ETHYLENE INSENSITIVE 3 OS=Arabidopsis thaliana GN=EIN3 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.210e-28
Identity = 85/222 (38.29%), Postives = 126/222 (56.76%), Query Frame = 1
Query:    4 NQEEALSRKLYPDSCLP-AXXXXXXXXXXXXXXXXXVEGVDNERNVEVEEIKPLEA-NLFNMGAMGSRDRFMMPPSLVPRIKGEVFETHSESIQKRRPSADEPHMTMDQKIYTCEFPQCPYNDYHHGFLDRTSRNNHQLNCPYRNNG-SQGCVMPNFQINNDQPAVFSLPFAQSTHPKPITSVKNQTQPQYNVSGLGLPDDGQKMISDLMSFYDTNLQPNKS 660
            NQEE+L+R+LYP+SC P +                 VEG + E + EVEE+KP +  N  N G +     F         +K EV   +SE ++KR+P+ D  +  MD+ ++TCE   C +++   GFLDR SR+NHQL CP+R++    G     F +N  +P V    F Q   P+P+ SV    QP  +++G+ +P+DGQKMIS+LMS YD N+Q N++
Sbjct:  293 NQEESLARELYPESCPPLSLSGGSCSLLMNDCSQYDVEGFEKESHYEVEELKPEKVMNSSNFGMVAKMHDFP--------VKEEVPAGNSEFMRKRKPNRDL-NTIMDRTVFTCENLGCAHSEISRGFLDRNSRDNHQLACPHRDSRLPYGAAPSRFHVNEVKPVV---GFPQ---PRPVNSV---AQP-IDLTGI-VPEDGQKMISELMSMYDRNVQSNQT 494          
BLAST of CK934708 vs. ExPASy Swiss-Prot
Match: EIL1_ARATH (ETHYLENE INSENSITIVE 3-like 1 protein OS=Arabidopsis thaliana GN=EIL1 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.871e-21
Identity = 77/229 (33.62%), Postives = 117/229 (51.09%), Query Frame = 1
Query:    4 NQEEALSRKLYPDSCLP---AXXXXXXXXXXXXXXXXXVEGVDNERN-VEVEEIKPLEANLFNMGAMGSRDRFMMPPSLVPRIKGEVFET-HSESIQKRRPSADEPHMTMDQKI-YTCEFPQCPYNDYHHGFLDRTSRNNHQLNCPYRNN----GSQGCVMPNFQINNDQPAVFSLPFAQSTHPKPITSVKNQTQPQYNVSGLGLPDDGQKMISDLMSFYDTNLQPNKS 660
            NQEE ++R+LYP+SC P   +                 VEG + E++  +VEE KP    +  + + G       P      IK EV  T + E  +KR+ + D   M MD+   YTCE  QCP++  + GF DR+SR+NHQ+ CPYR+N    G+    M   ++   Q  V           +PI           ++SG+G+P++GQKMI++LM+ YD N+Q N++
Sbjct:  295 NQEEVVARELYPESCPPLSSSSSLGSGSLLINDCSEYDVEGFEKEQHGFDVEERKPEIVMMHPLASFGVAKMQHFP------IKEEVATTVNLEFTRKRKQNNDMNVMVMDRSAGYTCENGQCPHSKMNLGFQDRSSRDNHQMVCPYRDNRLAYGASKFHMGGMKLVVPQQPV-----------QPI-----------DLSGVGVPENGQKMITELMAMYDRNVQSNQT 495          
The following BLAST results are available for this feature:
BLAST of CK934708 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
EIN3_ARATH1.210e-2838.29Protein ETHYLENE INSENSITIVE 3 OS=Arabidopsis thal... [more]
EIL1_ARATH1.871e-2133.62ETHYLENE INSENSITIVE 3-like 1 protein OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004227_G08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IIF_G08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934708 ID=CK934708; Name=CK934708; organism=Citrus sinensis; type=EST; length=835bp
GGGAATCAGGAAGAAGCTTTGTCTAGGAAACTGTATCCTGATAGCTGCCT
TCCAGCGTCTACTGGAGGAAGTGGTTCTTTCATCATTAGTGATATCAGTG
ATTATGATGTTGAAGGAGTAGACAATGAAAGGAATGTTGAAGTAGAGGAG
ATTAAACCACTCGAAGCCAATCTTTTCAACATGGGTGCTATGGGATCAAG
AGATCGGTTTATGATGCCTCCATCCTTGGTTCCTCGAATCAAGGGAGAGG
TTTTCGAGACCCACTCAGAATCCATTCAGAAGAGGAGGCCGTCGGCTGAT
GAGCCACATATGACGATGGATCAAAAGATTTATACCTGTGAGTTTCCCCA
GTGTCCCTACAATGACTACCACCATGGCTTTCTGGACAGGACTTCGAGAA
ACAATCACCAGCTGAATTGCCCATACCGCAATAACGGTTCTCAAGGGTGT
GTAATGCCAAACTTTCAAATTAACAATGACCAACCTGCAGTGTTCTCTCT
ACCATTTGCTCAGTCTACTCACCCGAAGCCAATAACTTCAGTGAAGAACC
AGACTCAACCTCAGTATAATGTATCGGGACTTGGACTTCCTGATGATGGA
CAAAAGATGATTTCTGATTTGATGTCCTTCTATGATACTAATCTTCAGCC
TAATAAGAGCATGAGTCAGGGGTGTCTGAACATTACGGAAGATCGAAATC
AGCAGCCAGAGCAGCAGAAATTTCAACTTCAGCTGGATGATAGCTTCTAT
AACCAAGGCATAGGTGTTATGAAGGGGGGCAACATGCCCATGAACAACCC
TGTTTTCTCCTNCACTGAAGTTCATTTTGATCAAT
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