CK934722
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934722 vs. ExPASy Swiss-Prot
Match: ATL1O_ARATH (RING-H2 finger protein ATL1O OS=Arabidopsis thaliana GN=ATL1O PE=2 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 5.515e-33 Identity = 65/95 (68.42%), Postives = 76/95 (80.00%), Query Frame = 1 Query: 466 QEDFFDEDHGPVLDHPIWYINTIGLPQSVIDSIAVFKYKKDVGLIEGTDCSVCLSEFQEDESLRLLPKCSHAFHISCIDTWLRSHTNCPLCRAPI 750 +E+F D + +DHPIW I T GL QS+I+SI + YK+ GLIE TDC VCL+EF+EDESLRLLPKC+HAFHISCIDTWL SHTNCPLCRA I Sbjct: 131 EEEFQDREQ---VDHPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGI 222
BLAST of CK934722 vs. ExPASy Swiss-Prot
Match: ATL5F_ARATH (RING-H2 finger protein ATL5F OS=Arabidopsis thaliana GN=ATL5F PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.502e-30 Identity = 61/95 (64.21%), Postives = 74/95 (77.89%), Query Frame = 1 Query: 481 DEDHGPVLD----HPIWYINTIGLPQSVIDSIAVFKYKKDVGLIEGTDCSVCLSEFQEDESLRLLPKCSHAFHISCIDTWLRSHTNCPLCRAPIL 753 DED D H +W I T+GL +S I+SI V +KK G+I+GT+CSVCL+EF+EDESLRLLPKCSHAFH++CIDTWL SH NCPLCRAP+L Sbjct: 87 DEDETEERDFSDFHHVWQIPTVGLHRSAINSITVVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVL 181
BLAST of CK934722 vs. ExPASy Swiss-Prot
Match: ATL3A_ARATH (RING-H2 finger protein ATL3A OS=Arabidopsis thaliana GN=ATL3A PE=2 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 7.714e-27 Identity = 53/78 (67.95%), Postives = 67/78 (85.90%), Query Frame = 1 Query: 535 GLPQSVIDSIAVFKYKKDVGLIEGTDCSVCLSEFQEDESLRLLPKCSHAFHISCIDTWLRSHTNCPLCRAPILSGAFV 768 GL +S+I SI V+KY+K G +E +DCSVCLSEFQE+ESLRLLPKC+HAFH+ CIDTWL+SH+NCPLCRA I++ + V Sbjct: 133 GLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAV 210
BLAST of CK934722 vs. ExPASy Swiss-Prot
Match: ATL5G_ARATH (Probable RING-H2 finger protein ATL5G OS=Arabidopsis thaliana GN=ATL5G PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.828e-26 Identity = 51/73 (69.86%), Postives = 63/73 (86.30%), Query Frame = 1 Query: 526 NTIGLPQSVIDSIAVFKYKKDVGLIEGTDCSVCLSEFQEDESLRLLPKCSHAFHISCIDTWLRSHTNCPLCRA 744 N GL +S+I SI V+KYK G ++G+DCSVCLSEF+E+ESLRLLPKC+HAFH+ CIDTWL+SH+NCPLCRA Sbjct: 113 NGDGLNESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRA 185
BLAST of CK934722 vs. ExPASy Swiss-Prot
Match: ATL2C_ARATH (Putative RING-H2 finger protein ATL2C OS=Arabidopsis thaliana GN=ATL2C PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 8.826e-23 Identity = 53/103 (51.46%), Postives = 72/103 (69.90%), Query Frame = 1 Query: 463 TQEDFFDED---HGPVLDHPIWYINTIGLPQSVIDSIAVFKYKKDVGL-IEGTDCSVCLSEFQEDESLRLLPKCSHAFHISCIDTWLRSHTNCPLCRAPILSG 759 ++ED+FD G + ++ ++ G+ QS+ID++ VF YK VGL I DC VCL EF+ ++ LRLLPKCSHAFH+ CIDTWL SH+ CPLCR+ +LSG Sbjct: 74 SREDYFDNVTALQGQL--QQLFNLHDSGVDQSLIDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLLSG 174
BLAST of CK934722 vs. ExPASy Swiss-Prot
Match: ATL4H_ARATH (Putative RING-H2 finger protein ATL4H OS=Arabidopsis thaliana GN=ATL4H PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.568e-22 Identity = 48/78 (61.54%), Postives = 57/78 (73.08%), Query Frame = 1 Query: 526 NTIGLPQSVIDSIAVFKYKKDVG--LIEGTDCSVCLSEFQEDESLRLLPKCSHAFHISCIDTWLRSHTNCPLCRAPIL 753 +T GL ++I I FK KK I GTDCS+CL EF EDESLRLLPKC+H FH+ CID WL+SH+NCPLCRA I+ Sbjct: 150 STAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRAKII 227
BLAST of CK934722 vs. ExPASy Swiss-Prot
Match: ATL1D_ARATH (RING-H2 finger protein ATL1D OS=Arabidopsis thaliana GN=ATL1D PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 9.758e-22 Identity = 48/95 (50.53%), Postives = 64/95 (67.37%), Query Frame = 1 Query: 472 DFFDEDHGPVLDHPIWYINTIGLPQSVIDSIAVFKYKKDVGLIEGTDCSVCLSEFQEDESLRLLPKCSHAFHISCIDTWLRSHTNCPLCRAPILS 756 +F D D +++++ GL Q++ID++ VF YK+ G E DC+VCL EF ED+ LRLLP CSHAFHI CIDTWL S++ CPLCR + S Sbjct: 97 EFSDSDTYQRQLQQLFHLHDSGLDQALIDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCRGTLFS 191
BLAST of CK934722 vs. ExPASy Swiss-Prot
Match: ATL4K_ARATH (RING-H2 finger protein ATL4K OS=Arabidopsis thaliana GN=ATL4K PE=2 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 2.174e-21 Identity = 50/101 (49.50%), Postives = 70/101 (69.31%), Query Frame = 1 Query: 466 QEDFFDED---HGPVLDHPIWYINTIGLPQSVIDSIAVFKYKKDVGLIEGT-DCSVCLSEFQEDESLRLLPKCSHAFHISCIDTWLRSHTNCPLCRAPILS 756 +ED+FD G + +++++ G+ QS ID++ VF YK +GL DC+VCL EF+ ++ LRLLPKCSHAFH+ CIDTWL SH+ CPLCR+ +LS Sbjct: 83 REDYFDNVTALQGQL--QQLFHLHDSGVDQSFIDTLPVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCRSSLLS 181
BLAST of CK934722 vs. ExPASy Swiss-Prot
Match: ATL5I_ARATH (RING-H2 finger protein ATL5I OS=Arabidopsis thaliana GN=ATL5I PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 3.139e-20 Identity = 46/94 (48.94%), Postives = 62/94 (65.96%), Query Frame = 1 Query: 514 IWYINTIGLPQSVIDSIAVFKYKKDVGLIEGT----------DCSVCLSEFQEDESLRLLPKCSHAFHISCIDTWLRSHTNCPLCRAPILSGAF 765 ++++N GL Q+ ID++ VF YK+ VG G DC+VCL EF E + LRLLP CSHAFH++CIDTWL+S++ CPLCR + S F Sbjct: 100 LFHLNDSGLDQAFIDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCRGTLFSPGF 193
BLAST of CK934722 vs. ExPASy Swiss-Prot
Match: ATL1N_ARATH (RING-H2 finger protein ATL1N OS=Arabidopsis thaliana GN=ATL1N PE=2 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 2.938e-18 Identity = 41/76 (53.95%), Postives = 53/76 (69.74%), Query Frame = 1 Query: 535 GLPQSVIDSIAVFKYKKDVGLI---EGTDCSVCLSEFQEDESLRLLPKCSHAFHISCIDTWLRSHTNCPLCRAPIL 753 GL S+I++ F+Y L E +CSVCL+EF++DE+LRL+PKC H FH CID WLRSHT CPLCRA ++ Sbjct: 115 GLDASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHTTCPLCRADLI 190 The following BLAST results are available for this feature:
BLAST of CK934722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934722 ID=CK934722; Name=CK934722; organism=Citrus sinensis; type=EST; length=925bpback to top |