CK934739

Overview
NameCK934739
Unique NameCK934739
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length685
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9351 contig Csv1_Contig9351:132..812. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: P2C60_ARATH (Probable protein phosphatase 2C 60 OS=Arabidopsis thaliana GN=At4g31860 PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.492e-57
Identity = 106/144 (73.61%), Postives = 127/144 (88.19%), Query Frame = 3
Query:    6 DLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAP-SAGGEGCDNMTMILVQFKNASNNGPSAAEQPP 434
            DLE EK+RILKAGGFI  GRVNGSLNL+RAIGD+EFK NK LP+EKQIVTA+PD++T+ELCDDD+FLV+ACDGIWDC++SQ+LVDF+ +QL +ETKLSV+CEKV DRCLAP ++GGEGCDNMTMILV+FKN +   PS  E  P
Sbjct:  201 DLEAEKERILKAGGFIHAGRVNGSLNLSRAIGDMEFKQNKFLPSEKQIVTASPDVNTVELCDDDDFLVLACDGIWDCMTSQQLVDFIHEQLNSETKLSVVCEKVLDRCLAPNTSGGEGCDNMTMILVRFKNPT---PSETELKP 341          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: P2C21_ARATH (Probable protein phosphatase 2C 21 OS=Arabidopsis thaliana GN=PPC4-2 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 2.814e-56
Identity = 106/146 (72.60%), Postives = 125/146 (85.62%), Query Frame = 3
Query:    6 DLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAP-SAGGEGCDNMTMILVQFK--NASNNGPSAAEQPP 434
            DLEVEK+RILKAGGFI  GR+NGSLNL RAIGD+EFK NK LP+EKQ+VTA+PDI+TI+LCDDD+FLV+ACDGIWDC+SSQELVDF+ +QL +ETKLS +CEKV DRCLAP +A GEGCDNMT+ILVQFK  N S   P  ++  P
Sbjct:  201 DLEVEKERILKAGGFIHAGRINGSLNLTRAIGDMEFKQNKFLPSEKQMVTADPDINTIDLCDDDDFLVVACDGIWDCMSSQELVDFIHEQLKSETKLSTVCEKVVDRCLAPDTATGEGCDNMTIILVQFKKPNPSETEPEDSKPEP 346          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: P2C11_ORYSJ (Probable protein phosphatase 2C 11 OS=Oryza sativa subsp. japonica GN=Os02g0180000 PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.230e-53
Identity = 95/130 (73.08%), Postives = 114/130 (87.69%), Query Frame = 3
Query:    6 DLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSA-GGEGCDNMTMILVQFK 392
            +LE E+DRI+KAGGFI +GR+NGSLNL RAIGD+EFK NK LP EKQIVTANPDI+ +ELCDDD+FLV+ACDGIWDC+SSQ+LVDF+ + +  E+ LS +CE+V DRCLAPS  GGEGCDNMTM+LVQFK
Sbjct:  201 ELEAERDRIVKAGGFIHMGRINGSLNLTRAIGDMEFKQNKFLPPEKQIVTANPDINVVELCDDDDFLVLACDGIWDCMSSQQLVDFIHEHIQKESSLSAVCERVLDRCLAPSTIGGEGCDNMTMVLVQFK 330          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: P2C58_ORYSJ (Probable protein phosphatase 2C 58 OS=Oryza sativa subsp. japonica GN=Os06g0651600 PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.913e-53
Identity = 97/144 (67.36%), Postives = 122/144 (84.72%), Query Frame = 3
Query:    6 DLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSA-GGEGCDNMTMILVQFKN--ASNNGPSAAEQ 428
            +LE E++RILKAGG+IQ+GRVNG++NL+RAIGD+EFK NK L  +KQ++TANPDI+T+ELCDDD+FLV+ACDGIWDC+SSQ+LVDF+ + +  E+ LS +CE+V DRCLAPS  GGEGCDNMTMILVQFK   + N   S AEQ
Sbjct:  201 ELEAERERILKAGGYIQMGRVNGTINLSRAIGDIEFKQNKFLSPDKQMLTANPDINTVELCDDDDFLVLACDGIWDCMSSQQLVDFIHEHINTESSLSAVCERVLDRCLAPSTLGGEGCDNMTMILVQFKKPISQNKNVSPAEQ 344          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: P2C70_ORYSJ (Probable protein phosphatase 2C 70 OS=Oryza sativa subsp. japonica GN=Os09g0558000 PE=2 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 4.352e-49
Identity = 87/139 (62.59%), Postives = 115/139 (82.73%), Query Frame = 3
Query:    6 DLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKNASNNGPSAA 422
            DL+ EK+RIL AGGFI  GRVNGSLNLARAIGD+E K N+ LPAE+QIVTA P+++T++L +DDEF+V+ACDGIWDC+SSQE+VDFV  ++  E  LS +CEK+ D CLAP +GG+GCDNMT+I+V+FK  S +  +++
Sbjct:  200 DLDAEKERILNAGGFIVAGRVNGSLNLARAIGDMELKQNEFLPAERQIVTAEPELNTVKLSEDDEFIVLACDGIWDCMSSQEVVDFVHKEMNTEDSLSAVCEKLLDHCLAPVSGGDGCDNMTVIIVKFKKPSKSAATSS 338          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: PP2C2_SCHPO (Protein phosphatase 2C homolog 2 OS=Schizosaccharomyces pombe GN=ptc2 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 9.413e-36
Identity = 75/128 (58.59%), Postives = 93/128 (72.66%), Query Frame = 3
Query:   12 EVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAG--GEGCDNMTMILVQF 389
            +VEK RI  AGGFI  GRVNGSL L+RAIGD E+K + SLP EKQIVTA PD+    +  DDEFL++ACDGIWDC SSQ++V+FVR  +     L VICE + DRC+A ++   G GCDNMT+ +V F
Sbjct:  164 DVEKARITAAGGFIDFGRVNGSLALSRAIGDFEYKKDSSLPPEKQIVTAFPDVVIHNIDPDDEFLILACDGIWDCKSSQQVVEFVRRGIVARQSLEVICENLMDRCIASNSESCGIGCDNMTICIVAF 291          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: Y0417_DROME (Probable protein phosphatase CG10417 OS=Drosophila melanogaster GN=CG10417 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.577e-35
Identity = 71/128 (55.47%), Postives = 100/128 (78.12%), Query Frame = 3
Query:   18 EKDRILKAGGFIQV-GRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGE--GCDNMTMILVQFK 392
            E  RI+KAGG + + GRVNG LNL+RA+GD  +K N +LPAE+Q+++A PDI  + +  +DEF+V+ACDGIW+ +SS+E+V+FVR +L +  KLS ICE++FD CLAP+  G+  GCDNMT ++VQFK
Sbjct:  438 EASRIIKAGGRVTLDGRVNGGLNLSRALGDHAYKTNVTLPAEEQMISALPDIKKLIITPEDEFMVLACDGIWNYMSSEEVVEFVRCRLKDNKKLSTICEELFDNCLAPNTMGDGTGCDNMTAVIVQFK 565          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: PP2C2_CAEEL (Probable protein phosphatase 2C T23F11.1 OS=Caenorhabditis elegans GN=T23F11.1 PE=2 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 2.170e-32
Identity = 68/126 (53.97%), Postives = 92/126 (73.02%), Query Frame = 3
Query:   12 EVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSA--GGEGCDNMTMILV 383
            E E  RI+ AGG+++  RVNG+L L+RA+GD  FK   + PAE+QIVTA PD+ T +L  D EF+V+ACDGIWD +++QE+VDFVR++L  +     ICE++  RCLAP    GG GCDNMT++LV
Sbjct:  159 ETEARRIIAAGGWVEFNRVNGNLALSRALGDFAFKNCDTKPAEEQIVTAFPDVITDKLTPDHEFIVLACDGIWDVMTNQEVVDFVREKLAEKRDPQSICEELLTRCLAPDCQMGGLGCDNMTVVLV 284          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: PPM1G_BOVIN (Protein phosphatase 1G OS=Bos taurus GN=PPM1G PE=2 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 2.834e-32
Identity = 78/168 (46.43%), Postives = 106/168 (63.10%), Query Frame = 3
Query:   12 EVEKDRILKAGGFIQV-GRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETK------LSVICEKVFDRCLAP--SAGGEGCDNMTMILVQFKNASNNGPSAAEQPPXXXXXXXXXXXXTGTESN 488
            EVE  RI  AGG + + GRVNG LNL+RAIGD  +K NK+LP E+Q+++A PDI  + L DD EF+VIACDGIW+ +SSQE++DF++ +++   +      LS I E++ D+CLAP  S  G GCDNMT I++ FK  +    +AA QP              G E N
Sbjct:  369 EVELARIKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVIDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSGDGTGCDNMTCIIICFKPRN----TAAPQPESGKRKLEEVLSTEGAEEN 532          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: PP2C3_SCHPO (Protein phosphatase 2C homolog 3 OS=Schizosaccharomyces pombe GN=ptc3 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.834e-32
Identity = 70/126 (55.56%), Postives = 88/126 (69.84%), Query Frame = 3
Query:   12 EVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLA--PSAGGEGCDNMTMILV 383
            E EK RI  AGGF+  GRVNG+L L+RAIGD EFK N +L  EKQIVTA PD+   E+ DDDEF+V+ACDGIWDC +SQ++++FVR  +   T L  I E + D C+A      G GCDNMT+ +V
Sbjct:  162 EAEKARICAAGGFVDFGRVNGNLALSRAIGDFEFK-NSNLEPEKQIVTALPDVVVHEITDDDEFVVLACDGIWDCKTSQQVIEFVRRGIVAGTSLEKIAENLMDNCIASDTETTGLGCDNMTVCIV 286          
The following BLAST results are available for this feature:
BLAST of CK934739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
P2C60_ARATH1.492e-5773.61Probable protein phosphatase 2C 60 OS=Arabidopsis ... [more]
P2C21_ARATH2.814e-5672.60Probable protein phosphatase 2C 21 OS=Arabidopsis ... [more]
P2C11_ORYSJ2.230e-5373.08Probable protein phosphatase 2C 11 OS=Oryza sativa... [more]
P2C58_ORYSJ2.913e-5367.36Probable protein phosphatase 2C 58 OS=Oryza sativa... [more]
P2C70_ORYSJ4.352e-4962.59Probable protein phosphatase 2C 70 OS=Oryza sativa... [more]
PP2C2_SCHPO9.413e-3658.59Protein phosphatase 2C homolog 2 OS=Schizosaccharo... [more]
Y0417_DROME3.577e-3555.47Probable protein phosphatase CG10417 OS=Drosophila... [more]
PP2C2_CAEEL2.170e-3253.97Probable protein phosphatase 2C T23F11.1 OS=Caenor... [more]
PPM1G_BOVIN2.834e-3246.43Protein phosphatase 1G OS=Bos taurus GN=PPM1G PE=2... [more]
PP2C3_SCHPO4.834e-3255.56Protein phosphatase 2C homolog 3 OS=Schizosaccharo... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004227_D03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IIF_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934739 ID=CK934739; Name=CK934739; organism=Citrus sinensis; type=EST; length=685bp
GGGCTGATCTTGAGGTTGAGAAAGATAGAATTCTCAAAGCTGGTGGTTTT
ATACAAGTTGGACGTGTTAATGGAAGTTTAAATTTGGCGAGAGCTATTGG
AGATGTGGAGTTCAAGCTAAACAAAAGTTTGCCTGCTGAAAAACAGATTG
TGACTGCCAATCCTGATATAAGTACTATTGAACTTTGTGATGACGATGAG
TTTCTTGTCATAGCTTGTGATGGGATTTGGGATTGCCTTTCAAGTCAAGA
ACTTGTCGATTTTGTCAGGGATCAGTTAACCAACGAAACAAAACTATCAG
TCATTTGCGAGAAAGTATTCGATCGGTGCTTGGCTCCATCAGCTGGTGGT
GAAGGATGTGACAACATGACCATGATCTTGGTTCAGTTTAAAAATGCTTC
TAATAATGGTCCTTCTGCGGCTGAGCAGCCACCATCATCTGACCAACAAT
CCAAGTTAGCCAGCAGTTCCACAGGGACTGAATCGAATTAGCTGTAGCAC
TCTTTGCACTGACTAAATGGTACTCATTTTCTACTGTCTGAAACACTGCT
GAGCTCAAGAACCATGGTCCCTGATTTTACATTTGGAAAACGATTCTCAT
GATTTGGTTGTAAATATTTAAGCTTTTTCATTTTAATGGGATAGATAATC
CTTAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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