CK934746

Overview
NameCK934746
Unique NameCK934746
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length912
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7102 contig Csv1_Contig7102:68..979. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934746 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.859e-41
Identity = 85/211 (40.28%), Postives = 117/211 (55.45%), Query Frame = 2
Query:  278 NETISDYFQVYQFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSXRGPNFGTHMXXLYGESVC 910
            ++ IS       FE     RN     A GF+ Y++FITAT  +    FGTTG    + KEI AFLA    +T+ G+  A  GP +WG CYN E      YC  S ++  PC PG +Y+GRG I I +NYNYGA G A+  +LLN+P+ +  +A ++F+ A+W WMT  ++ +PSAHD   G W P+  D+   R P FG     + G   C
Sbjct:    2 SQNISSLISKNLFERILVHRNDRACGAKGFYTYEAFITATKTFA--AFGTTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQGSPGDYCASSQQW--PCAPGKKYFGRGPIQISYNYNYGAAGSAIGVNLLNNPDLVANDAVVSFKTALWFWMT-AQQPKPSAHDVITGRWSPSVADSAPGRVPGFGVITNIINGGMEC 207          
BLAST of CK934746 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 3.172e-41
Identity = 80/200 (40.00%), Postives = 112/200 (56.00%), Query Frame = 2
Query:  311 QFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSXRGPNFGTHMXXLYGESVC 910
            QF++    RN     A GF+ Y +FI A   +   GFGTTG    + KEI AF      +T+ G+  A  GP +WG C+  E +PS +YC  S ++  PC  G  YYGRG + + WNYNYG  G A+ +DLLN+P+ +  +  +AF+AAIW WMTP +  +PS H   VG W+P+  D  + R P +G     + G   C
Sbjct:   79 QFDDMLKHRNDNACPARGFYTYDAFINAAKSFP--GFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPSSNYCSPSAEW--PCASGKSYYGRGPMQLSWNYNYGQCGRAIGSDLLNNPDLVSNDPVIAFKAAIWFWMTP-QSPKPSCHAVIVGQWQPSDADRAAGRVPGYGVITNIINGGLEC 273          
BLAST of CK934746 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 4.142e-41
Identity = 80/199 (40.20%), Postives = 113/199 (56.78%), Query Frame = 2
Query:  314 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSXRGPNFGTHMXXLYGESVC 910
            F+     RN P   A GF+ Y +F+ A   +    FGTTG+   + +E+ AFL     +T+ G+  A  GP AWG C+  E +PS +YC  S +Y  PC PG  YYGRG + + WNYNYG  GEAL+ +LL +P+ +  +  L+F+ A+W WMTP +  +PS HD   G W+P+  DT + R P +G     L G   C
Sbjct:   11 FDQMLKHRNNPACPAKGFYTYDAFLAAAKSFP--SFGTTGSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAPSPRY--PCAPGKSYYGRGPLQLSWNYNYGPCGEALRVNLLGNPDLVATDRVLSFKTALWFWMTP-QAPKPSCHDVLTGRWQPSAADTAAGRLPGYGVLTNLLNGGLEC 204          
BLAST of CK934746 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3)

HSP 1 Score: 167.933 bits (424), Expect = 7.066e-41
Identity = 79/200 (39.50%), Postives = 111/200 (55.50%), Query Frame = 2
Query:  311 QFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSXRGPNFGTHMXXLYGESVC 910
            QF++    RN     A GF+ Y +FITA   +   GFGTTG    + KE+ AF      +T+ G+  A  GP +WG C+  E +P+  YC+ S   T+PC  G  YYGRG + + WNYNYG  G A+  DLLN+P+ +  +A +AF+AAIW WMT  +  +PS H    G W+P+  D  + R P +G     + G   C
Sbjct:   94 QFDDMLKHRNDAACPARGFYTYNAFITAAKSFP--GFGTTGDTATRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPSA--TWPCASGKRYYGRGPMQLSWNYNYGLCGRAIGVDLLNNPDLVANDAVIAFKAAIWFWMT-AQPPKPSCHAVIAGQWQPSDADRAAGRLPGYGVITNIINGGLEC 288          
BLAST of CK934746 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.020e-39
Identity = 79/200 (39.50%), Postives = 111/200 (55.50%), Query Frame = 2
Query:  314 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYG-VATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSXRGPNFGTHMXXLYGESVC 910
            F      RN     A GF+ Y +FI A   +    F TTG +  + +EI AFLA    +T+ G G  A  GP AWG CYN E++P  SYC     Y  PC PG +Y+GRG + + WNYNYG  G A+  DLLN+P+ +  + T++F++A W WMTP +  +PS H+  +G W P+ +D  + R P +G     + G   C
Sbjct:   83 FNQMLLHRNDGACPARGFYTYDAFIAAARSFP--AFATTGDQATRKREIAAFLAQTSHETTGGAGWAAPDGPYAWGYCYNRELNPPSSYCASDPNY--PCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTP-QSPKPSCHNVIIGAWSPSSSDRAAGRVPGYGVITNIINGGLEC 277          
BLAST of CK934746 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.877e-39
Identity = 79/199 (39.70%), Postives = 111/199 (55.78%), Query Frame = 2
Query:  314 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSXRGPNFGTHMXXLYGESVC 910
            F+     RN       GF+ Y +FI A   +   GFGTTG    K KE+ AFLA    +T+ G+  A  GP AWG C+  E +  + YC       +PC PG +YYGRG I +  NYNYG  G+A+K DL+N+P+ +  N T++F+ AIW WMTP + ++PS+HD   G W P+  D+ + R P +G     + G   C
Sbjct:   89 FDQMLKYRNDGRCAGHGFYTYDAFIAAARSFN--GFGTTGDDNTKKKELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQNTQEVYCSPK---DWPCAPGKKYYGRGPIQLTHNYNYGLAGQAIKEDLINNPDLLSTNPTVSFKTAIWFWMTP-QANKPSSHDVITGRWTPSAADSSAGRVPGYGVITNIINGGIEC 281          
BLAST of CK934746 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 3.877e-39
Identity = 78/200 (39.00%), Postives = 110/200 (55.00%), Query Frame = 2
Query:  314 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYG-VATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSXRGPNFGTHMXXLYGESVC 910
            F      RN     A GF+ Y +FI A   +    F TTG +  + +EI AFLA    +T+ G G  A  GP AWG CYN E++P  SYC     Y  PC PG +Y+GRG + + WNYNYG  G A+  DLLN+P+ +  + T++F++A W WMTP +  +PS H+  +G W P+ +D  + R   +G     + G   C
Sbjct:   61 FNQMLLHRNDGACPARGFYTYDAFIAAARSFP--AFATTGDQATRKREIAAFLAQTSHETTGGAGWAAPDGPYAWGYCYNRELNPPSSYCASDPNY--PCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTP-QSPKPSCHNVIIGAWSPSSSDRAAGRATGYGVITNIINGGLEC 255          
BLAST of CK934746 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 4.287e-38
Identity = 78/201 (38.81%), Postives = 112/201 (55.72%), Query Frame = 2
Query:  311 QFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYG-VATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSXRGPNFGTHMXXLYGESVC 910
            +F+     RN     A GF+ Y +FI A   +    F TTG    + +E+ AFLA    +T+ G G  A  GP  WG CYN E++P+  YC   +   YPC PG +Y+GRG + + WNYNYG  G A+  DLLN+P+ +  + T++F++A W WMTP +  +PS HD  +G W P+ +D  + R P FG     + G   C
Sbjct:   80 RFDQMLLHRNDGGCPARGFYTYDAFIAAAKSFP--AFATTGDDATRKREVAAFLAQTSHETTGGAGWAAPDGPYTWGYCYNRELNPAD-YCQ--WDPNYPCAPGKQYFGRGPMQLTWNYNYGQCGRAIGVDLLNNPDLLATDPTISFKSAFWFWMTP-QSPKPSCHDVIIGAWSPSGSDQAAGRVPGFGLITNIINGGLEC 274          
BLAST of CK934746 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 7.312e-38
Identity = 77/199 (38.69%), Postives = 109/199 (54.77%), Query Frame = 2
Query:  314 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSXRGPNFGTHMXXLYGESVC 910
            F+     RN     A GF+ Y +FI A   Y    FG TG    + +EI AFL     +T+ G+  A  GP AWG C+  E +PS +YC  + ++  PC PG +YYGRG I I WNYNYG  G A+  DLLN P+ +  ++ ++F++A+W WMT  +  +PS+HD     W P+  D  + R P +GT    + G   C
Sbjct:   85 FDQMLKHRNDGACPAKGFYTYDAFIAAAKAYP--SFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPS-TYCSATPQF--PCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMT-AQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLEC 277          
BLAST of CK934746 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 7.312e-38
Identity = 73/199 (36.68%), Postives = 111/199 (55.78%), Query Frame = 2
Query:  314 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSXRGPNFGTHMXXLYGESVC 910
            FE     RN     A GF+ Y++F+ A   +    FG TG    + +E+ AFL     +T+ G+  A  GP +WG C+  E +P   YC  S ++  PC PG +YYGRG I + +N+NYG  G A+  DLL++P+ +  +AT++F+ A+W WMTP + ++PS+HD   G W P+  D  + R P +G     + G   C
Sbjct:   98 FERLLLHRNDGACPARGFYTYEAFLAAAAAFP--AFGGTGNTETRKREVAAFLGQTSHETTGGWPTAPDGPFSWGYCFKQEQNPPSDYCQPSPEW--PCAPGRKYYGRGPIQLSFNFNYGPAGRAIGVDLLSNPDLVATDATVSFKTALWFWMTP-QGNKPSSHDVITGRWAPSPADAAAGRAPGYGVITNIVNGGLEC 291          
The following BLAST results are available for this feature:
BLAST of CK934746 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
CHID_SOLLC1.859e-4140.28Basic endochitinase (Fragment) OS=Solanum lycopers... [more]
CHI2_BRANA3.172e-4140.00Endochitinase CH25 OS=Brassica napus PE=2 SV=1[more]
CHIT_CARPA4.142e-4140.20Endochitinase OS=Carica papaya PE=1 SV=1[more]
CHIB_ARATH7.066e-4139.50Basic endochitinase B OS=Arabidopsis thaliana GN=C... [more]
CHI1_GOSHI1.020e-3939.50Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1[more]
CHIX_PEA3.877e-3939.70Endochitinase OS=Pisum sativum PE=2 SV=1[more]
CHI2_GOSHI3.877e-3939.00Endochitinase 2 (Fragment) OS=Gossypium hirsutum P... [more]
CHI1_THECC4.287e-3838.81Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 S... [more]
CHIT_PHAVU7.312e-3838.69Endochitinase OS=Phaseolus vulgaris PE=1 SV=1[more]
CHI2_ORYSJ7.312e-3836.68Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004227_C04 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IIF_C04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934746 ID=CK934746; Name=CK934746; organism=Citrus sinensis; type=EST; length=912bp
GGGGGACGCTGCATCCGCCTTGTCAAATCCCTTGCTTCCCATTTCTCTCA
TCTTCCCCCAAGTGAATCTCGAAACAACAGGTAGATCTGGTGAGAACGAG
AAAATGAAGATGAAGAATGGCAGTGTGGCAATGACACTGACAGTGGCACT
AGTACTGGCACTGGCAGTGAGTTTGGCAAATGGAGATGAATCAGAGAAGG
TGATAGTGAAGAAGTTGAAGGGGAAAAAAGTTTGCATAAAAGGGTGGGAG
TGCCCAACATGGTCGAAATTCTGCTGTAACGAGACGATATCAGACTATTT
CCAGGTTTACCAGTTTGAGAATTTCTTCTCGAAAAGGAACACGCCGGTGG
CACATGCCGTGGGATTCTGGGATTATCAGTCTTTCATTACTGCCACCGTC
AAATATCAGCCCCTCGGCTTCGGTACCACCGGTACTAAGCTTGATAAGAT
GAAGGAGATTTGCGCTTTTCTTGCCCACGTGGGCTGCAAGACCTCTTGTG
GATATGGAGTGGCCACTGGAGGACCATTGGCCTGGGGACTTTGCTACAAC
CATGAAATGAGCCCCAGTCAGTCATATTGTGATGATTCCTACAAATACAC
ATATCCCTGCACCCCTGGAGCTGAGTACTATGGCCGAGGTGCTATACCTA
TATACTGGAACTATAACTATGGAGCCACTGGGGAAGCATTGAAGGCAGAT
CTGTTGAATCATCCCGAATACATTGAGCAGAATGCTACCCTTGCCTTTGA
GGCTGCAATTTGGAAGTGGATGACCCCAGTCAAGAAATCCCAGCCTTCAG
CCCATGATGCCTTTGTTGGCAACTGGAAGCCCACCAAGAATGATACTTTG
TCCNAACGGGGACCTAACTTTGGTACCCACATGANNNNNCTCTATGGTGA
GAGCGTATGCGN
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