CK934756

Overview
NameCK934756
Unique NameCK934756
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length882
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10290 contig Csv1_Contig10290:267..1147. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934756 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 2.039e-13
Identity = 64/206 (31.07%), Postives = 101/206 (49.03%), Query Frame = 1
Query:   85 ILALATXPQLGASES--EPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGK-NGQ--CPTDVIQLSPKDKRGKNLGLLPYD-NSTIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEGK------TCQNFFKLEKVSASIFDMKIALDIPCLYKIVHCSTLVNGSCDTLCKDVGV-SNVDGVQRLVVVD 663
            +LA A  P L A++S   P+LD+ G ++ +   YY+V  L     GGG++      NG   CP  V+Q   +    + L   P +    +VR ST++ + FS     +  +  ++W++D  + S G+ F+TIG  K      T  ++FK+E+   S F           YK+V C T V GSC   C DVG+  +  G +RL + D
Sbjct:   17 LLAAAANPLLSAADSAPNPVLDIDGEKLRTGTNYYIVPVLRD--HGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCRWTSS-TVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCGSGF-----------YKLVFCPT-VCGSCKVKCGDVGIYIDQKGRRRLALSD 207          
BLAST of CK934756 vs. ExPASy Swiss-Prot
Match: SPOR1_IPOBA (Sporamin A OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.560e-12
Identity = 54/160 (33.75%), Postives = 86/160 (53.75%), Query Frame = 1
Query:   70 HSSFLILALATXPQLGASESEPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKD-KRGKNLGLLPY---DNSTIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGE-GKTCQNFFKLEKVSASIFDMKI 534
            HS F  + L T  +  +SE+ P+LD+ G++V +   YY+VSA+WG   GG   A      +C TDVI +SP D   G  + + P      ST+V  ST    +F+ +++ + C  +  W + +D+AS G+ F+  GE      N FK+E V A++   K+
Sbjct:   22 HSRFNPIRLPTTHEPASSET-PVLDINGDEVRAGGNYYMVSAIWGAGGGGLRLAHLDMMSKCATDVI-VSPNDLDNGDPITITPATADPESTVVMASTYQTFRFN-IATNKLCVNNVNWGIQHDSAS-GQYFLKAGEFVSDNSNQFKIELVDANLNSYKL 177          
BLAST of CK934756 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.119e-11
Identity = 50/189 (26.46%), Postives = 93/189 (49.21%), Query Frame = 1
Query:  127 SEPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKDKRGKNLGLLPYDN-STIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEGK------TCQNFFKLEKVSASIFDMKIALDIPCLYKIVHCSTLVNGSCDTLCKDVGVSNVDGVQRLVVVDDND 672
            + P+LD  G+++ +  +YY++S++ G   GGG++  +     CP  V+Q       G  +     D+   +VR ST++ ++F  +   + C+  ++W++DN + S GK ++T    K      T  ++FK+EK                 YK   C ++ + SC TLC D+G  + D  Q  + + DN+
Sbjct:   28 NSPVLDTDGDELQTGVQYYVLSSISGA-GGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPIRD-RLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGV------------LGYKFRFCPSVCD-SCTTLCSDIGRHSDDDGQIRLALSDNE 201          
The following BLAST results are available for this feature:
BLAST of CK934756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
MIRA_RICDU2.039e-1331.07Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
SPOR1_IPOBA6.560e-1233.75Sporamin A OS=Ipomoea batatas PE=2 SV=1[more]
ASP_THECC1.119e-1126.4621 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004227_B08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IIF_B08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934756 ID=CK934756; Name=CK934756; organism=Citrus sinensis; type=EST; length=882bp
GGGACAAAACAAACAGCAGCTATCCTNNNAAAAAAAAAAAAAAACAAATG
AAGACTTCATTAGTAACAACACTCCTCCTTCCTTATACTTGCTTTGGCCA
CNNNACCTCAGTTGGGCGCCTCAGAATCTGAACCTATCTTAGATGTCTAT
GGCAACCAGGTGGACTCCAGCCACAGGTATTATCTTGTCTCAGCACTCTG
GGGAGTTAAAACCGGCGGTGGAATTAGCGCGGACAAAGGCAAAAATGGAC
AGTGTCCAACGGATGTTATCCAATTAAGTCCTAAGGACAAAAGGGGAAAG
AATTTAGGTTTACTTCCGTATGACAATTCCACAATTGTCCGGGAATCCAC
TAATATTAAATTGAAATTCTCAAGAGTTTCTTCTCTTCAGCAGTGTAACA
AAGATTCGTTGTGGAAAGTTGACAACGATAACGCTTCATTAGGAAAGCAG
TTTATAACAATCGGTGAAGGTAAAACGTGTCAAAATTTTTTTAAACTTGA
GAAAGTTAGTGCATCAATATTTGATATGAAAATAGCACTAGACATTCCCT
GTCTATACAAAATTGTTCATTGTTCAACACTTGTTAATGGTTCTTGCGAT
ACACTCTGCAAAGACGTTGGCGTTTCTAATGTGGATGGCGTCCAACGTCT
AGTTGTGGTTGATGATAATGATCAGCCAAATCTGCCCTTGCCTGTTGTGT
TATTTCCAGCTGATAGTGGAAGATCTATGTTATTTCCGTCTCTGTAATGA
ATAAGCCAACAGGCTGTATTATTCTAAATAATGGACCAGGCTAGTACTCT
TTAATCTCTATGGTTAAGCATAAATAAAATAGCCTATGGTGCTTTCGCTG
TTAAACAAAAAAAAAAAAAAAAAAAAAAAAAA
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