CK934768

Overview
NameCK934768
Unique NameCK934768
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1726 contig Csv1_Contig1726:1..854. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934768 vs. ExPASy Swiss-Prot
Match: HAL3A_ARATH (Phosphopantothenoylcysteine decarboxylase OS=Arabidopsis thaliana GN=HAL3A PE=1 SV=1)

HSP 1 Score: 345.895 bits (886), Expect = 1.701e-94
Identity = 159/189 (84.13%), Postives = 178/189 (94.18%), Query Frame = 1
Query:  286 DREAMQVNTGLRKPRILLAASGSVAAIKFGNLCHCFSEWAEVRAVATKSSLHFIDRAALPKDVIFYTDEDEWATWNKIGDSVLHIELRRWADIMVIAPLSASTLGKIAGGLCDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTERHLMSIDELGISLIPPVSKRLACGDYGNGAMAEPSLIYSTVRL 852
            DR+ M+VNT  RKPR+LLAASGSVAAIKFGNLCHCF+EWAEVRAV TKSSLHF+D+ +LP++V  YTDEDEW++WNKIGD VLHIELRRWAD++VIAPLSA+TLGKIAGGLCDNLLTCI+RAWDY KPLFVAPAMNT MWNNPFTERHL+S+DELGI+LIPP+ KRLACGDYGNGAMAEPSLIYSTVRL
Sbjct:    7 DRQDMEVNTTPRKPRVLLAASGSVAAIKFGNLCHCFTEWAEVRAVVTKSSLHFLDKLSLPQEVTLYTDEDEWSSWNKIGDPVLHIELRRWADVLVIAPLSANTLGKIAGGLCDNLLTCIIRAWDYTKPLFVAPAMNTLMWNNPFTERHLLSLDELGITLIPPIKKRLACGDYGNGAMAEPSLIYSTVRL 195          
BLAST of CK934768 vs. ExPASy Swiss-Prot
Match: HAL3B_ARATH (Probable phosphopantothenoylcysteine decarboxylase OS=Arabidopsis thaliana GN=HAL3B PE=2 SV=2)

HSP 1 Score: 329.717 bits (844), Expect = 1.261e-89
Identity = 152/185 (82.16%), Postives = 174/185 (94.05%), Query Frame = 1
Query:  298 MQVNTGLRKPRILLAASGSVAAIKFGNLCHCFSEWAEVRAVATKSSLHFIDRAALPKDVIFYTDEDEWATWNKIGDSVLHIELRRWADIMVIAPLSASTLGKIAGGLCDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTERHLMSIDELGISLIPPVSKRLACGDYGNGAMAEPSLIYSTVRL 852
            M+V+T  RKPRILLAASGSVA+IKF NLCHCFSEWAEV+AVA+KSSL+F+D+ +LP++V  YTDEDEW++WNKIGD VLHIELRRWAD+M+IAPLSA+TL KIAGGLCDNLLTCIVRAWDY+KPLFVAPAMNT MWNNPFTERHL+ +DELGI+LIPP+ K+LACGDYGNGAMAEPSLIYSTVRL
Sbjct:    3 MEVDTVTRKPRILLAASGSVASIKFSNLCHCFSEWAEVKAVASKSSLNFVDKPSLPQNVTLYTDEDEWSSWNKIGDPVLHIELRRWADVMIIAPLSANTLAKIAGGLCDNLLTCIVRAWDYSKPLFVAPAMNTLMWNNPFTERHLVLLDELGITLIPPIKKKLACGDYGNGAMAEPSLIYSTVRL 187          
BLAST of CK934768 vs. ExPASy Swiss-Prot
Match: COAC_MOUSE (Phosphopantothenoylcysteine decarboxylase OS=Mus musculus GN=Ppcdc PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.046e-43
Identity = 89/179 (49.72%), Postives = 115/179 (64.25%), Query Frame = 1
Query:  319 RKPRILLAASGSVAAIKFGNLCHCFSE--WAEVRAVATKSSLHFIDRAALPKDVIFYTDEDEWATWNKIGDSVLHIELRRWADIMVIAPLSASTLGKIAGGLCDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTERHLMSIDELGISLIPPVSKRLACGDYGNGAMAEPSLIYSTVR 849
            RK R+L+  +GSVAA+K   L     +    EV  V T+ + HF     +P  V  Y+D DEW  W +  D VLHI+LRRWAD+M++APL A+TLGK+A G+CDNLLTC++RAWD NKPL   PAMNT MW +P T + +  +   G   IP VSK+L CGD G GAMAE   I + V+
Sbjct:   16 RKFRVLVGVTGSVAALKLPLLVSKLLDVPGLEVTVVTTERAKHFYSPQDVP--VTLYSDADEWEMWKRRSDPVLHIDLRRWADLMLVAPLDANTLGKVASGICDNLLTCVIRAWDLNKPLLFCPAMNTAMWEHPLTAQQVAQLKAFGYVEIPCVSKKLVCGDQGLGAMAEVETIVAKVQ 192          
BLAST of CK934768 vs. ExPASy Swiss-Prot
Match: COAC_HUMAN (Phosphopantothenoylcysteine decarboxylase OS=Homo sapiens GN=PPCDC PE=1 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.860e-41
Identity = 85/179 (47.49%), Postives = 112/179 (62.57%), Query Frame = 1
Query:  319 RKPRILLAASGSVAAIKFGNLCHCFSE--WAEVRAVATKSSLHFIDRAALPKDVIFYTDEDEWATWNKIGDSVLHIELRRWADIMVIAPLSASTLGKIAGGLCDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTERHLMSIDELGISLIPPVSKRLACGDYGNGAMAEPSLIYSTVR 849
            RK  +L+  +GSVAA+K   L     +    EV  V T+ + HF     +P  V  Y+D DEW  W    D VLHI+LRRWAD++++APL A+TLGK+A G+CDNLLTC++RAWD +KPL   PAMNT MW +P T + +  +   G   IP V+K+L CGD G GAMAE   I   V+
Sbjct:   16 RKFHVLVGVTGSVAALKLPLLVSKLLDIPGLEVAVVTTERAKHFYSPQDIP--VTLYSDADEWEMWKSRSDPVLHIDLRRWADLLLVAPLDANTLGKVASGICDNLLTCVMRAWDRSKPLLFCPAMNTAMWEHPITAQQVDQLKAFGYVEIPCVAKKLVCGDEGLGAMAEVGTIVDKVK 192          
BLAST of CK934768 vs. ExPASy Swiss-Prot
Match: TYSY_SCHPO (Probable thymidylate synthase OS=Schizosaccharomyces pombe GN=SPAC15E1.04 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 4.708e-36
Identity = 79/172 (45.93%), Postives = 109/172 (63.37%), Query Frame = 1
Query:  322 KPRILLAASGSVAAIKFGNLCHCFSEW--AEVRAVATKSSLHFIDRAALPK-DVIFYTDEDEWATWNKIGDSVLHIELRRWADIMVIAPLSASTLGKIAGGLCDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTERHLMSIDEL--GISLIPPVSKRLACGDYGNGAMAE 822
            K  IL+AA+GSVAAIK   +      +   +V+ V T  + +F+++  L    V  Y + D+W  W+ +   + HIELRRWA +++IAPLSA+T+ K+A GLCDNLLT ++RAW   KP+ +APAMNT MW NP T+ HL +I  +      I P+ K LACGD G G MAE
Sbjct:   30 KYHILVAATGSVAAIKLTLIVKSLLTYKGVDVQVVLTDPARNFVEKEDLTALGVNVYNNADDWKNWDGLECPITHIELRRWAHLLLIAPLSANTMAKMANGLCDNLLTSLIRAWAPLKPILLAPAMNTLMWTNPITQEHLSAISRIYKNSEFIMPIEKVLACGDIGMGGMAE 201          
BLAST of CK934768 vs. ExPASy Swiss-Prot
Match: COAC_DICDI (Putative phosphopantothenoylcysteine decarboxylase OS=Dictyostelium discoideum GN=ppcdc PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 8.878e-35
Identity = 77/182 (42.31%), Postives = 114/182 (62.64%), Query Frame = 1
Query:  322 KPRILLAASGSVAAIKFGNLCHCFSEWAEVRAVATKSSLHFI---DRAALPKDVIFYTDEDEWATWNKIGDSVLHIELRRWADIMVIAPLSASTLGKIAGGLCDNLLTCIVRAWDY-NKPLFVAPAMNTFMWNNPFTERHLMSIDEL--GISLIPPVSKRLACGDYGNGAMAE-PSLIYSTV 846
            K  ++L  +GSVA IK   L     +   +  + T++SL F+   D   +      Y D+DEW   + +  S LHI+LR WA+ ++I+P SA+TLGKI+ GLCDNLLT ++RAWDY NK + +APAMNT MW NPFT +H+ ++  +   + +I P+ K+L CGD G GAM + P ++  T+
Sbjct:   12 KKNLILGLTGSVATIKAKLLVEQLIQHFNLIVIPTETSLKFLSDQDFEFISSKCKIYKDKDEWENVDLLKRSALHIDLRNWANSILISPCSANTLGKISNGLCDNLLTSLIRAWDYKNKSMILAPAMNTMMWENPFTFKHIETLKSISPNVFIIDPIEKKLFCGDIGMGAMEQVPKIVDFTI 193          
BLAST of CK934768 vs. ExPASy Swiss-Prot
Match: YKI8_YEAST (Uncharacterized protein YKL088W OS=Saccharomyces cerevisiae GN=YKL088W PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 7.778e-31
Identity = 86/224 (38.39%), Postives = 121/224 (54.02%), Query Frame = 1
Query:  259 MAYSEPTSTDREAMQVNTGLRKP-------------RILLAASGSVAAIK----FGNLCHCFS-EWAEVRAVATKSSLHFIDRAALPKDVIFYTDEDEWA--TWNKIGDS-----VLHIELRRWADIMVIAPLSASTLGKIAGGLCDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTERHLMSI--DELGISLIPPVSKRLACGDYGNGAMAEPSLIYSTVR 849
            ++ +  T  ++E +   TG R P              IL+ A+GSVA IK       L   +  E   ++ + TK + HF+    +   V  + +ED W     NK   S     +LH ELR+WADI +IAPLSA+TL K+A G+C+NLLT ++R W    P+ +APAMNTFM+ NP T++HL S+  D   I ++ PV K L CGD G G M E + I   VR
Sbjct:  274 LSANNSTHKNKEVITAPTGPRVPFTEFFQKEDDKKFHILIGATGSVATIKVPLIIDKLFKIYGPEKISIQLIVTKPAEHFLKGLKMSTHVKIWREEDAWVFDAVNKNDTSLSLNLILHHELRKWADIFLIAPLSANTLAKLANGICNNLLTSVMRDWSPLTPVLIAPAMNTFMYINPMTKKHLTSLVQDYPFIQVLKPVEKVLICGDIGMGGMREWTDIVEIVR 497          
BLAST of CK934768 vs. ExPASy Swiss-Prot
Match: VHS3_YEAST (Protein VHS3 OS=Saccharomyces cerevisiae GN=VHS3 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.982e-26
Identity = 60/132 (45.45%), Postives = 86/132 (65.15%), Query Frame = 1
Query:  460 LPKDVIFYTDEDEWATWNKIGDSVLHIELRRWADIMVIAPLSASTLGKIAGGLCDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTERHLMSIDE--LGISLIPPVSKRLAC-GDYGNGAMAEPSLIYSTV 846
            LP  + F+TD+DEW  W +  D VLHIELRRWADI+V+APL+A+TL KIA GLCDNLLT ++RAW+   P+F+AP+M +  +N+  T++H   I E    +++  P  K +   GD G   M + + I   +
Sbjct:  434 LPAHIQFWTDQDEWDVWRQRTDPVLHIELRRWADILVVAPLTANTLAKIALGLCDNLLTSVIRAWNPTFPIFLAPSMGSGTFNSIMTKKHFRIIQEEMPWVTVFKPSEKVMGINGDIGLSGMMDANEIVGKI 565          
BLAST of CK934768 vs. ExPASy Swiss-Prot
Match: SIS2_YEAST (Protein SIS2 OS=Saccharomyces cerevisiae GN=SIS2 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.192e-25
Identity = 58/124 (46.77%), Postives = 84/124 (67.74%), Query Frame = 1
Query:  460 LPKDVIFYTDEDEWATWNKIGDSVLHIELRRWADIMVIAPLSASTLGKIAGGLCDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTERHLMSIDE--LGISLIPPVSKRLAC-GDYGNGAMAE 822
            LP  +  +TD+DEW  W +  D VLHIELRRWADI+V+APL+A+TL KIA GLCDNLLT ++RAW+ + P+ +AP+M +  +N+  T++ L +I E    +++  P  K +   GD G G M +
Sbjct:  353 LPPHIQLWTDQDEWDAWKQRTDPVLHIELRRWADILVVAPLTANTLSKIALGLCDNLLTSVIRAWNPSYPILLAPSMVSSTFNSMMTKKQLQTIKEEMSWVTVFKPSEKVMDINGDIGLGGMMD 476          
BLAST of CK934768 vs. ExPASy Swiss-Prot
Match: SIS2_CANTR (Protein SIS2 OS=Candida tropicalis GN=SIS2 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.863e-25
Identity = 64/151 (42.38%), Postives = 95/151 (62.91%), Query Frame = 1
Query:  394 SEWAEVRAVATKSSLHFIDRAALP-----KDVIFYTDEDEWATWNKIGDSVLHIELRRWADIMVIAPLSASTLGKIAGGLCDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTERHLMSI--DELGISLIPPVSKRL-ACGDYGNGAMAE 822
            S+   ++ + TKSS +F+    L      K V  +TD DEW TW    D VLHIELRRWADI+++ PL+A+TL KI+ G+CDNLLT ++RAW+ + P+ +APAM++  +++  T+R L  I  D   I ++ P+ K   + GD G G M +
Sbjct:  296 SDKISIQVILTKSSENFLLPETLNVLENVKKVRVWTDIDEWTTWKTRLDPVLHIELRRWADILLVCPLTANTLAKISLGICDNLLTNVIRAWNSSYPILLAPAMDSHSYSSSTTKRQLRLIADDMPWIEVLKPLEKVFGSYGDIGMGGMTD 446          
The following BLAST results are available for this feature:
BLAST of CK934768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
HAL3A_ARATH1.701e-9484.13Phosphopantothenoylcysteine decarboxylase OS=Arabi... [more]
HAL3B_ARATH1.261e-8982.16Probable phosphopantothenoylcysteine decarboxylase... [more]
COAC_MOUSE1.046e-4349.72Phosphopantothenoylcysteine decarboxylase OS=Mus m... [more]
COAC_HUMAN4.860e-4147.49Phosphopantothenoylcysteine decarboxylase OS=Homo ... [more]
TYSY_SCHPO4.708e-3645.93Probable thymidylate synthase OS=Schizosaccharomyc... [more]
COAC_DICDI8.878e-3542.31Putative phosphopantothenoylcysteine decarboxylase... [more]
YKI8_YEAST7.778e-3138.39Uncharacterized protein YKL088W OS=Saccharomyces c... [more]
VHS3_YEAST1.982e-2645.45Protein VHS3 OS=Saccharomyces cerevisiae GN=VHS3 P... [more]
SIS2_YEAST2.192e-2546.77Protein SIS2 OS=Saccharomyces cerevisiae GN=SIS2 P... [more]
SIS2_CANTR2.863e-2542.38Protein SIS2 OS=Candida tropicalis GN=SIS2 PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004227_B03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IIF_B03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934768 ID=CK934768; Name=CK934768; organism=Citrus sinensis; type=EST; length=854bp
GGGGGGTTACTTCAAAATTTGATGGCGTTGCTTTGTTTGTCAACGTCGCG
GCTGCCGCTCTCTATTTAAAACCCCCCTCGCACTCTCTCTACTCTCTAGG
TCTAGGCTGCCTCCAAGCCAGCGACCGTTAGTCGTCGGTTTCCACACTCC
GACGCTGCGACGTCGATTGTTGTCTCCCCTCCGCCACGCCACTCGTGGAT
TGCTGTTCTACCACCGCCGGCCGCGGCTGATCTGATTCATCTCATCTCAT
GATTGATTATGGCATACTCTGAACCTACAAGTACCGATAGGGAGGCGATG
CAGGTCAATACTGGTCTGAGGAAACCCCGTATTTTACTTGCTGCAAGTGG
AAGTGTAGCTGCAATAAAATTTGGGAATCTCTGTCATTGTTTTTCTGAGT
GGGCGGAAGTAAGAGCGGTGGCCACAAAGTCCTCTCTACACTTCATTGAT
AGAGCAGCGCTTCCTAAGGATGTGATCTTTTACACAGACGAGGATGAATG
GGCCACCTGGAACAAAATAGGTGATAGCGTTCTTCACATCGAGCTCCGCA
GATGGGCTGATATTATGGTTATTGCTCCGCTGTCAGCAAGCACACTTGGC
AAGATTGCAGGTGGATTGTGTGACAATCTGCTGACATGCATTGTGCGGGC
ATGGGACTACAATAAGCCACTGTTTGTTGCACCTGCTATGAACACTTTCA
TGTGGAATAATCCATTCACAGAGCGGCATCTTATGTCAATTGATGAGCTT
GGAATTTCTCTCATTCCACCTGTCTCCAAAAGGCTGGCTTGCGGAGATTA
TGGTAATGGTGCCATGGCTGAACCTTCATTGATCTACTCGACTGTGAGAC
TGTT
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