CK934793

Overview
NameCK934793
Unique NameCK934793
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length782
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934793 vs. ExPASy Swiss-Prot
Match: UGDH_SOYBN (UDP-glucose 6-dehydrogenase OS=Glycine max PE=2 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 2.067e-80
Identity = 140/167 (83.83%), Postives = 155/167 (92.81%), Query Frame = 3
Query:    3 VVSSMFNTVSGKEIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPEEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVIVASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNILDVEKLRKIGFIVYSIGKPLDKWLKDMPAVA 503
            VV+SMFNTVS K+IAILGFAFKKDTGDTRETPAIDVC+GL+GDKA LSIYDPQV E+ IQRDL MNKFDWDHPIHLQPTSP+T+ +V V  DAYEATKD+HG+CILTEWDEFK LDYQKI++NMQKPAFVFDGRNI+D +KLR+IGFIVYSIGKPLD WLKDMPAVA
Sbjct:  314 VVASMFNTVSNKKIAILGFAFKKDTGDTRETPAIDVCQGLLGDKANLSIYDPQVTEDQIQRDLSMNKFDWDHPIHLQPTSPTTVKKVSVVWDAYEATKDAHGLCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIVDADKLREIGFIVYSIGKPLDPWLKDMPAVA 480          
BLAST of CK934793 vs. ExPASy Swiss-Prot
Match: UGDH1_ARATH (Probable UDP-glucose 6-dehydrogenase 1 OS=Arabidopsis thaliana GN=UGD1 PE=1 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 7.853e-80
Identity = 137/167 (82.04%), Postives = 156/167 (93.41%), Query Frame = 3
Query:    3 VVSSMFNTVSGKEIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPEEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVIVASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNILDVEKLRKIGFIVYSIGKPLDKWLKDMPAVA 503
            VVSSMFN+VS K+IA+LGFAFKKDTGDTRETPAIDVCKGL+ DKARLSIYDPQV E+ IQRDL MNKFDWDHP+HLQP SP+T+ QV V  DAYEATKD+HG+CI+TEWDEFKNLD+QKI++NMQKPAFVFDGRNI++++KLR+IGFIVYSIGKPLD WLKDMPAVA
Sbjct:  314 VVSSMFNSVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLEDKARLSIYDPQVTEDQIQRDLSMNKFDWDHPLHLQPMSPTTVKQVTVTWDAYEATKDAHGICIMTEWDEFKNLDFQKIFDNMQKPAFVFDGRNIMNLQKLREIGFIVYSIGKPLDDWLKDMPAVA 480          
BLAST of CK934793 vs. ExPASy Swiss-Prot
Match: UGDH2_ARATH (Probable UDP-glucose 6-dehydrogenase 2 OS=Arabidopsis thaliana GN=UGD2 PE=2 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 1.934e-78
Identity = 134/165 (81.21%), Postives = 152/165 (92.12%), Query Frame = 3
Query:    3 VVSSMFNTVSGKEIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPEEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVIVASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNILDVEKLRKIGFIVYSIGKPLDKWLKDMPA 497
            +VSSMFNTVS K++AILGFAFKKDTGDTRETPAIDVCKGL+GDKA++SIYDPQV EE IQRDL M KFDWDHP+HLQP SP+T+ QV V  DAYEATKD+H VC+LTEWDEFK+LDYQKI++NMQKPAF+FDGRNI++V KLR+IGFIVYSIGKPLD WLKDMPA
Sbjct:  314 IVSSMFNTVSNKKVAILGFAFKKDTGDTRETPAIDVCKGLLGDKAQISIYDPQVTEEQIQRDLSMKKFDWDHPLHLQPMSPTTVKQVSVTWDAYEATKDAHAVCVLTEWDEFKSLDYQKIFDNMQKPAFIFDGRNIMNVNKLREIGFIVYSIGKPLDPWLKDMPA 478          
BLAST of CK934793 vs. ExPASy Swiss-Prot
Match: UGDH_DROME (UDP-glucose 6-dehydrogenase OS=Drosophila melanogaster GN=sgl PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.832e-36
Identity = 80/155 (51.61%), Postives = 107/155 (69.03%), Query Frame = 3
Query:    3 VVSSMFNTVSGKEIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPEEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVI-VASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNILDVEKLRKIGFIVYSIGK 464
            ++ S+FNTVS K IAILGFAFKK+TGDTRET AI VC+ L+ + A L IYDP+V  E I  DL        HP   +  SP  + + + + SD Y A + +H + I TEWDEF +LD+++IY +M KPA++FDGR ILD E+L++IGF V +IGK
Sbjct:  314 IIESLFNTVSDKRIAILGFAFKKNTGDTRETAAITVCQTLLEEGAALDIYDPKVEPEQIIDDLT-------HPSVTE--SPEKVKKAVQIHSDPYSAVRATHALVICTEWDEFVDLDFKRIYQSMMKPAYIFDGRKILDHERLQQIGFHVQTIGK 459          
BLAST of CK934793 vs. ExPASy Swiss-Prot
Match: UGDH_PONAB (UDP-glucose 6-dehydrogenase OS=Pongo abelii GN=UGDH PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.451e-33
Identity = 78/156 (50.00%), Postives = 102/156 (65.38%), Query Frame = 3
Query:    3 VVSSMFNTVSGKEIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPEEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVIVASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNILD--VEKLRKIGFIVYSIGK 464
            ++ S+FNTV+ K+IAILGFAFKKDTGDTRE+ +I + K LM + A L IYDP+VP E I  DL        HP   +    S +  V ++ D YEA   +H V I TEWD FK LDY++I+  M KPAF+FDGR +LD    +L+ IGF + +IGK
Sbjct:  318 IIDSLFNTVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDL-------SHPGVSEDDQVSRL--VTISKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGK 464          
BLAST of CK934793 vs. ExPASy Swiss-Prot
Match: UGDH_HUMAN (UDP-glucose 6-dehydrogenase OS=Homo sapiens GN=UGDH PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.451e-33
Identity = 78/156 (50.00%), Postives = 102/156 (65.38%), Query Frame = 3
Query:    3 VVSSMFNTVSGKEIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPEEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVIVASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNILD--VEKLRKIGFIVYSIGK 464
            ++ S+FNTV+ K+IAILGFAFKKDTGDTRE+ +I + K LM + A L IYDP+VP E I  DL        HP   +    S +  V ++ D YEA   +H V I TEWD FK LDY++I+  M KPAF+FDGR +LD    +L+ IGF + +IGK
Sbjct:  318 IIDSLFNTVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDL-------SHPGVSEDDQVSRL--VTISKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGK 464          
BLAST of CK934793 vs. ExPASy Swiss-Prot
Match: UGDH_CHICK (UDP-glucose 6-dehydrogenase OS=Gallus gallus GN=UGDH PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.451e-33
Identity = 77/156 (49.36%), Postives = 104/156 (66.67%), Query Frame = 3
Query:    3 VVSSMFNTVSGKEIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPEEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVIVASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNILD--VEKLRKIGFIVYSIGK 464
            ++ S+FNTV+ K+IAILGFAFKKDTGDTRE+ +I + K LM + A+L IYDP+VP+E I  DL        HP   +    S +  V ++ D YEA   +H + I TEWD FK LDY++I+  M KPAF+FDGR +LD    +L+ IGF + +IGK
Sbjct:  318 IIDSLFNTVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAKLHIYDPKVPKEQIILDL-------SHPGVSEDNQVSRL--VTISQDPYEACDGAHALVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDDLHNELQVIGFQIETIGK 464          
BLAST of CK934793 vs. ExPASy Swiss-Prot
Match: UGDH_CAEEL (UDP-glucose 6-dehydrogenase OS=Caenorhabditis elegans GN=sqv-4 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.476e-33
Identity = 74/159 (46.54%), Postives = 105/159 (66.04%), Query Frame = 3
Query:    3 VVSSMFNTVSGKEIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPEEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVI-VASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNILDVEKLRKIGFIVYSIGKPLDK 476
            +++ +FNTV+ K+IAI GFAFKK+TGDTRE+ AI V K LM + A+LS+YDP+V +  +  DL               TS   + ++I V SD Y A + +H + +LTEWDEF  L+Y +I+N+MQ PA +FDGR ILD + LR+IGF  ++IG   D+
Sbjct:  325 IIAELFNTVTDKKIAIFGFAFKKNTGDTRESSAIHVIKHLMEEHAKLSVYDPKVQKSQMLNDLA------------SVTSAQDVERLITVESDPYAAARGAHAIVVLTEWDEFVELNYSQIHNDMQHPAAIFDGRLILDQKALREIGFRTFAIGTSPDQ 471          
BLAST of CK934793 vs. ExPASy Swiss-Prot
Match: UGDH_BOVIN (UDP-glucose 6-dehydrogenase OS=Bos taurus GN=UGDH PE=1 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 4.223e-33
Identity = 76/156 (48.72%), Postives = 99/156 (63.46%), Query Frame = 3
Query:    3 VVSSMFNTVSGKEIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPEEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVIVASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNILD--VEKLRKIGFIVYSIGK 464
            ++ S+FNTV+ K+IAILGFAFKKDTGDTRE+ +I + K LM + A L IYDP+VP E I  DL       D  +            V ++ D YEA   +H V I TEWD FK LDY++I+  M KPAF+FDGR +LD    +L+ IGF + +IGK
Sbjct:  318 IIDSLFNTVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSKDDQV---------ARLVTISKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGK 464          
BLAST of CK934793 vs. ExPASy Swiss-Prot
Match: UGDH_RAT (UDP-glucose 6-dehydrogenase OS=Rattus norvegicus GN=Ugdh PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.203e-33
Identity = 77/156 (49.36%), Postives = 101/156 (64.74%), Query Frame = 3
Query:    3 VVSSMFNTVSGKEIAILGFAFKKDTGDTRETPAIDVCKGLMGDKARLSIYDPQVPEEHIQRDLQMNKFDWDHPIHLQPTSPSTINQVIVASDAYEATKDSHGVCILTEWDEFKNLDYQKIYNNMQKPAFVFDGRNILD--VEKLRKIGFIVYSIGK 464
            ++ S+FNTV+ K+IAILGFAFKKDTGDTRE+ +I + K LM + A L IYDP+VP E I  DL        HP        S +  V ++ D YEA   +H + I TEWD FK LDY++I+  M KPAF+FDGR +LD    +L+ IGF + +IGK
Sbjct:  318 IIDSLFNTVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDL-------SHPGVSADDQVSRL--VTISKDPYEACDGAHALVICTEWDMFKELDYERIHKRMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGK 464          
The following BLAST results are available for this feature:
BLAST of CK934793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
UGDH_SOYBN2.067e-8083.83UDP-glucose 6-dehydrogenase OS=Glycine max PE=2 SV... [more]
UGDH1_ARATH7.853e-8082.04Probable UDP-glucose 6-dehydrogenase 1 OS=Arabidop... [more]
UGDH2_ARATH1.934e-7881.21Probable UDP-glucose 6-dehydrogenase 2 OS=Arabidop... [more]
UGDH_DROME1.832e-3651.61UDP-glucose 6-dehydrogenase OS=Drosophila melanoga... [more]
UGDH_PONAB1.451e-3350.00UDP-glucose 6-dehydrogenase OS=Pongo abelii GN=UGD... [more]
UGDH_HUMAN1.451e-3350.00UDP-glucose 6-dehydrogenase OS=Homo sapiens GN=UGD... [more]
UGDH_CHICK1.451e-3349.36UDP-glucose 6-dehydrogenase OS=Gallus gallus GN=UG... [more]
UGDH_CAEEL2.476e-3346.54UDP-glucose 6-dehydrogenase OS=Caenorhabditis eleg... [more]
UGDH_BOVIN4.223e-3348.72UDP-glucose 6-dehydrogenase OS=Bos taurus GN=UGDH ... [more]
UGDH_RAT7.203e-3349.36UDP-glucose 6-dehydrogenase OS=Rattus norvegicus G... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004226_F10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IF_F10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934793 ID=CK934793; Name=CK934793; organism=Citrus sinensis; type=EST; length=782bp
GGGTGGTTTCATCCATGTTCAATACTGTTTCAGGCAAGGAGATTGCTATT
TTAGGATTTGCTTTCAAGAAGGACACTGGTGATACCAGGGAGACCCCTGC
CATTGATGTATGTAAAGGGTTGATGGGTGACAAGGCTCGCTTGAGTATAT
ATGATCCTCAGGTTCCCGAGGAACACATTCAAAGGGATCTTCAAATGAAT
AAGTTTGATTGGGACCATCCAATTCATCTTCAGCCCACGAGTCCTTCAAC
AATCAATCAAGTTATAGTTGCCTCAGATGCTTATGAGGCAACAAAGGATT
CTCATGGTGTTTGCATTCTGACCGAGTGGGATGAGTTCAAAAATCTTGAT
TACCAGAAAATTTACAACAACATGCAGAAGCCTGCATTTGTTTTCGATGG
TCGGAATATTCTCGACGTGGAGAAGCTCAGGAAAATTGGGTTCATTGTTT
ACTCCATTGGTAAGCCACTGGATAAATGGCTCAAGGACATGCCTGCTGTG
GCATAAAAGACTGAAATAGCATAACAAAGCAAGGCTTGTGACTTGGTTGA
GTGTTAGAATAGATATTTGAGAGATTTAAGTATCATCCTATATTTTTGTT
TTAATTATCATTTTTATATCTTATTTTTACATTTCATATCTTCAAGTTTT
GATATCATGTGGTTTGTTAATTTTTATATTGTAATCCCATGTCAGTAGAA
TATCAGAATTTGTTGTTCACTACTTGGATTAGTTTAATGAAATCAGAAAC
TTGACAAAAAAACAAAAAAAAAAAAAAAAAAA
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