CK934794

Overview
NameCK934794
Unique NameCK934794
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length882
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1730 contig Csv1_Contig1730:1..883. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934794 vs. ExPASy Swiss-Prot
Match: IPMKB_ARATH (Inositol polyphosphate multikinase beta OS=Arabidopsis thaliana GN=IPK2b PE=1 SV=1)

HSP 1 Score: 343.969 bits (881), Expect = 6.848e-94
Identity = 158/257 (61.48%), Postives = 201/257 (78.21%), Query Frame = 1
Query:  127 EVAGHKAGKGKLGPLVDDSGCFYKPYQCDDRGSKEVAFYTSFSSNTKIPDHIRRFFPVFYGTKLVEASDGSGLSPHIVLQDLVSNRNNPSIMDIKIGARTWYPQASDDYIERCFQKDRETTTSLLGFRISGLQIYENKESGFWKPVKKLVQAFNVEDVRLVLRKFVSSNSPTDSNSVPDCSFAPSVYGGSSGILAQLLELKEWFEVQTIYNLNSCSVLMVYEKESLL-----KGTSPGAEIKLVDFAHVIEGTGIID 882
            +VAGH A  GKLGPLVDD G F+KP Q D RG  E  FY SF+SN K+PDHI R+FPV++GT+LVEASDGSG  PH+VL D+VS   NPS+MD+KIG+RTWYP  S++Y ++C +KDR+TTT  LGFR+SG +I++++ES FW+  KKLV  +N +  RL LRKFVSSNSP DSN  P+C+FA  VYGG +GILAQLLELK+WFE QT+Y+ NSCS+LM+YE ES+L        +P A++KLVDFAHV++G G+ID
Sbjct:    8 QVAGHIASDGKLGPLVDDQGRFFKPLQGDSRGEHEAKFYESFTSNMKVPDHIHRYFPVYHGTQLVEASDGSGKLPHLVLDDVVSGYANPSVMDVKIGSRTWYPDVSEEYFKKCIKKDRQTTTVSLGFRVSGFKIFDHQESSFWRAEKKLVLGYNADGARLALRKFVSSNSPADSNLTPNCAFASEVYGGCNGILAQLLELKDWFETQTLYHFNSCSILMIYENESILMQGGDDAPAPRAQVKLVDFAHVLDGNGVID 264          
BLAST of CK934794 vs. ExPASy Swiss-Prot
Match: IPMKA_ARATH (Inositol polyphosphate multikinase alpha OS=Arabidopsis thaliana GN=IPK2a PE=1 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 5.256e-86
Identity = 151/254 (59.45%), Postives = 197/254 (77.56%), Query Frame = 1
Query:  127 EVAGHKAGKGKLGPLVDDSGCFYKPYQCDDRGSKEVAFYTSFSSNTKIPDHIRRFFPVFYGTKLVEASDGSGLSPHIVLQDLVSNRNNPSIMDIKIGARTWYPQASDDYIERCFQKDRETTTSLLGFRISGLQIYENKESGFWKPVKKLVQAFNVEDVRLVLRKFVSSNSPTDSNSVPDCSFAPSVYGGSSGILAQLLELKEWFEVQTIYNLNSCSVLMVYEKESLLKGTSPGA--EIKLVDFAHVIEGTGIID 882
            +VAGH A  GK GPLVDD G F+KP Q D RG  EV FY SFSSNT++P+HI R+FPV++GT+ VE SDG+ +   +VL++L++    PS+MD+K+G+RTWYP AS++YI++C +KD  TTT   GFRISG ++Y++KES FWKP +KL++  +V+  RL LRKFVSSNS +D+ S PD +FA SVYGGS GIL QLLELK WFE QT+Y+ NSCS+LMVYE ES+LKG    A  ++KLVDFAHV++G G+ID
Sbjct:    9 QVAGHIAKDGKPGPLVDDKGRFFKPLQGDSRGEIEVKFYESFSSNTEVPEHIHRYFPVYHGTQAVEGSDGAAM---MVLENLLAEYTKPSVMDVKMGSRTWYPDASEEYIQKCLKKDTGTTTVSSGFRISGFEVYDHKESSFWKPERKLLRGLDVDGARLTLRKFVSSNSLSDTGSKPDSAFASSVYGGSHGILTQLLELKTWFENQTLYHFNSCSILMVYENESILKGNDDDARPQVKLVDFAHVLDGNGVID 259          
BLAST of CK934794 vs. ExPASy Swiss-Prot
Match: IPMK_RAT (Inositol polyphosphate multikinase OS=Rattus norvegicus GN=Ipmk PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.726e-12
Identity = 57/228 (25.00%), Postives = 103/228 (45.18%), Query Frame = 1
Query:  127 EVAGHKAGKGKLGPLVDDSGCFYKPYQCDDRGSKEVAFYT---SFSSNTKIPDHIRRFFPVFYGTKLVEASDGSGLSPHIVLQDLVSNRNNPSIMDIKIGARTWYPQASDDYIERCFQKDRETTTSLLGFRISGLQIYENKESGFWKPVKKLVQAFNVEDVRLVLRKFVSSNSPTDSNSVPDCSFAPSVYGGSSGILAQLLELKEWFEVQTIYNLNSCSVLMVYEKES 801
            +VAGH  GK K+G L    G   K  Q   RG +E+ FYT   +      +   +R+  P +YG   V +   +    ++ L+D+    N P IMD+KIG +++ P AS + I++  Q  +      +GF + G+++Y      +    +   +    E ++  + KF  +      ++V             +  + ++ ++ +WFE Q   N  + S+L VYE  S
Sbjct:   35 QVAGHMYGKDKVGILQHPDGTVLKQLQPPPRGPRELEFYTMVYAADCADAVLLELRKHLPKYYG---VWSPPSAPNDVYLKLEDVTHKFNKPCIMDVKIGRKSYDPFASAEKIQQ--QVSKYPLMEEIGFLVLGMRVYHLHSDSYETQNQHYGRGLTKETLKEGVSKFFHNGFCLRKDAV-------------AASIQKVEKILQWFENQKQLNFYASSLLFVYEGSS 244          
BLAST of CK934794 vs. ExPASy Swiss-Prot
Match: IPMK_MOUSE (Inositol polyphosphate multikinase OS=Mus musculus GN=Ipmk PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.255e-12
Identity = 56/228 (24.56%), Postives = 103/228 (45.18%), Query Frame = 1
Query:  127 EVAGHKAGKGKLGPLVDDSGCFYKPYQCDDRGSKEVAFYT---SFSSNTKIPDHIRRFFPVFYGTKLVEASDGSGLSPHIVLQDLVSNRNNPSIMDIKIGARTWYPQASDDYIERCFQKDRETTTSLLGFRISGLQIYENKESGFWKPVKKLVQAFNVEDVRLVLRKFVSSNSPTDSNSVPDCSFAPSVYGGSSGILAQLLELKEWFEVQTIYNLNSCSVLMVYEKES 801
            +VAGH  GK K+G L    G   K  Q   RG +E+ FYT   +      +   +R+  P +YG   V +   +    ++ L+D+    N P IMD+KIG +++ P AS + I++  Q  +      +GF + G+++Y      +    +   +    E ++  + KF  +      +++             +  + ++ ++ +WFE Q   N  + S+L VYE  S
Sbjct:   35 QVAGHMYGKDKVGILQHPDGTVLKQLQPPPRGPRELEFYTMVYAADCADAVLLELRKHLPKYYG---VWSPPTAPNDVYLKLEDVTHKFNKPCIMDVKIGRKSYDPFASSEKIQQ--QVSKYPLMEEIGFLVLGMRVYHLHSDSYETQNQHYGRGLTKETLKEGVSKFFHNGFCLRKDAI-------------AASIQKVEKILQWFENQKQLNFYASSLLFVYEGSS 244          
BLAST of CK934794 vs. ExPASy Swiss-Prot
Match: IPMK_HUMAN (Inositol polyphosphate multikinase OS=Homo sapiens GN=IPMK PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.023e-12
Identity = 54/228 (23.68%), Postives = 103/228 (45.18%), Query Frame = 1
Query:  127 EVAGHKAGKGKLGPLVDDSGCFYKPYQCDDRGSKEVAFYTSFSSNTKIPD---HIRRFFPVFYGTKLVEASDGSGLSPHIVLQDLVSNRNNPSIMDIKIGARTWYPQASDDYIERCFQKDRETTTSLLGFRISGLQIYENKESGFWKPVKKLVQAFNVEDVRLVLRKFVSSNSPTDSNSVPDCSFAPSVYGGSSGILAQLLELKEWFEVQTIYNLNSCSVLMVYEKES 801
            +VAGH  GK K+G L    G   K  Q   RG +E+ FY    +          +R++ P +YG   + +   +    ++ L+D+    N P IMD+KIG +++ P AS + I++  Q  +      +GF + G+++Y      +    +   ++   E ++  + +F  +      ++V             +  + ++ ++ +WFE Q   N  + S+L VYE  S
Sbjct:   52 QVAGHMYGKDKVGILQHPDGTVLKQLQPPPRGPRELEFYNMVYAADCFDGVLLELRKYLPKYYG---IWSPPTAPNDLYLKLEDVTHKFNKPCIMDVKIGQKSYDPFASSEKIQQ--QVSKYPLMEEIGFLVLGMRVYHVHSDSYETENQHYGRSLTKETIKDGVSRFFHNGYCLRKDAV-------------AASIQKIEKILQWFENQKQLNFYASSLLFVYEGSS 261          
The following BLAST results are available for this feature:
BLAST of CK934794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
IPMKB_ARATH6.848e-9461.48Inositol polyphosphate multikinase beta OS=Arabido... [more]
IPMKA_ARATH5.256e-8659.45Inositol polyphosphate multikinase alpha OS=Arabid... [more]
IPMK_RAT1.726e-1225.00Inositol polyphosphate multikinase OS=Rattus norve... [more]
IPMK_MOUSE2.255e-1224.56Inositol polyphosphate multikinase OS=Mus musculus... [more]
IPMK_HUMAN5.023e-1223.68Inositol polyphosphate multikinase OS=Homo sapiens... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004226_F12 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IF_F12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934794 ID=CK934794; Name=CK934794; organism=Citrus sinensis; type=EST; length=882bp
GGGGAGAGGCCTTGATAAAAATAAAATAATAGCTTAGGCTTTATGCTGCA
AATATTTATATTATACTCTCTCTTGCAGCCTTTGCATTGGAAAAGATTGA
AAGCTTCTTTGATTTTTGAACTTCAAGAGGTTGCAGGTCACAAAGCTGGC
AAGGGAAAGCTTGGACCCCTTGTGGATGATTCAGGATGTTTTTACAAGCC
TTACCAGTGTGATGACCGTGGCTCAAAAGAGGTGGCTTTCTACACTTCCT
TCTCTTCCAATACAAAGATACCGGATCACATCCGCAGATTCTTCCCTGTC
TTCTATGGTACTAAACTTGTAGAGGCATCTGATGGATCCGGTCTCTCTCC
CCACATCGTGTTGCAGGATCTTGTCTCGAACCGCAACAATCCATCCATCA
TGGACATTAAGATTGGTGCGAGAACATGGTATCCTCAAGCATCTGATGAC
TATATTGAAAGGTGCTTTCAGAAAGATAGAGAAACCACCACCTCTTTATT
GGGTTTTAGGATATCTGGGTTGCAGATATACGAAAACAAAGAATCTGGAT
TCTGGAAGCCAGTGAAGAAACTTGTCCAAGCATTTAATGTGGAGGATGTT
CGATTAGTTCTTAGGAAGTTTGTTTCGTCAAACTCACCTACCGATTCAAA
TTCAGTCCCAGACTGTTCTTTTGCACCAAGTGTTTATGGTGGTTCTTCTG
GGATTTTGGCACAATTGTTGGAGCTGAAGGAATGGTTTGAGGTTCAGACC
ATCTACAATTTAAATTCTTGTTCAGTTCTTATGGTATATGAAAAGGAGTC
ATTGTTGAAAGGAACGAGTCCTGGTGCTGAAATCAAACTTGTTGATTTTG
CTCATGTTATTGAGGGAACAGGTATTATTGAT
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