CK934804

Overview
NameCK934804
Unique NameCK934804
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934804 vs. ExPASy Swiss-Prot
Match: CY561_PIG (Cytochrome b561 OS=Sus scrofa GN=CYB561 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.659e-32
Identity = 76/185 (41.08%), Postives = 107/185 (57.84%), Query Frame = 1
Query:    4 RGGLSLASDNKDLIFNVHPVLMVIGLVLLNGEAMLAYRTVSG-TKKLRKLVHLSLQFIAFLLSLIGVWAALKFHNDKGIDNFYSLHSWLGLACVFLFGIQWAAGFTTFWYPGGSKNGRASLLPWHVFLGVYIYALAVATAATGILEKVTFLQTNHVISRYSTEALLVNSLGILIVVLGGFVILAL 555
            RGG++  S    L FNVHP+ M+IGLV L G+A+L YR      K+  K++H  L  +AF+++L+G+ A   +H  KGI + YSLHSW G+    LF  QW  G   F +PG S + R+   P HVF G  I+ L+V TA  G+ E + F Q     S + +E +L N LG+L+V  G  V+  L
Sbjct:   40 RGGIAWESA---LQFNVHPLCMIIGLVFLQGDALLVYRVFRNEAKRTTKILHGLLHVLAFVIALVGLVAVFDYHRKKGIADLYSLHSWCGILVFVLFLAQWLVGLGFFLFPGASFSLRSRYRPQHVFFGAAIFLLSVGTALLGLKEALLF-QLGTKYSAFESEGVLANVLGLLLVAFGAVVLYIL 220          
BLAST of CK934804 vs. ExPASy Swiss-Prot
Match: CYBR1_XENLA (Cytochrome b reductase 1 OS=Xenopus laevis GN=cybrd1 PE=2 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 9.652e-32
Identity = 69/176 (39.20%), Postives = 101/176 (57.39%), Query Frame = 1
Query:   46 FNVHPVLMVIGLVLLNGEAMLAYR---TVSGTKKLRKLVHLSLQFIAFLLSLIGVWAALKFHNDKGIDNFYSLHSWLGLACVFLFGIQWAAGFTTFWYPGGSKNGRASLLPWHVFLGVYIYALAVATAATGILEKVTFLQTNHVISRYSTEALLVNSLGILIVVLGGFVILALITP 564
            FN HPVL+  G + + G A++ YR   T   +K L K +H  L   A + +++ + A   FHN K I N YSLHSW+GL  V L+ +Q   G + +  P  S   RA+L+P HV+ G++I+   +ATA  GI EK+ F       S+   EA+ VN+ G+LI+V GG V+  + TP
Sbjct:   45 FNWHPVLVTSGFIFIQGIAIIVYRLPWTWKCSKLLMKFIHAGLHLTALIFTIVALVAVFDFHNAKNIPNMYSLHSWIGLTVVILYALQLVLGVSIYLLPFASNTLRAALMPVHVYSGLFIFGTVIATALMGITEKLIFSLKEPPYSKLPPEAIFVNTFGLLILVFGGLVVWMVTTP 220          
BLAST of CK934804 vs. ExPASy Swiss-Prot
Match: CYBR1_XENTR (Cytochrome b reductase 1 OS=Xenopus tropicalis GN=cybrd1 PE=2 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 4.790e-31
Identity = 68/176 (38.64%), Postives = 101/176 (57.39%), Query Frame = 1
Query:   46 FNVHPVLMVIGLVLLNGEAMLAYR---TVSGTKKLRKLVHLSLQFIAFLLSLIGVWAALKFHNDKGIDNFYSLHSWLGLACVFLFGIQWAAGFTTFWYPGGSKNGRASLLPWHVFLGVYIYALAVATAATGILEKVTFLQTNHVISRYSTEALLVNSLGILIVVLGGFVILALITP 564
            FN HPVL+  G + + G A++ YR   T + +K L K +H  L   AF+ +++ + A   FHN K I N YSLHSW+GL  V L+ +Q   G + +  P      RA+L+P HV+ G+ I+   +ATA  GI EK+ F       S+   EA+ VN+ G++I+V GG V+  + TP
Sbjct:   45 FNWHPVLVTSGFIFIQGIAIIVYRLPWTWNCSKLLMKFIHAGLHLTAFVFTIVALVAVFDFHNAKNIPNMYSLHSWIGLTVVILYALQLVLGVSIYLLPFARDTLRAALMPVHVYSGLLIFGTVIATALMGITEKLIFSLKEPPYSKMPPEAIFVNTFGLIILVFGGLVVWMVTTP 220          
BLAST of CK934804 vs. ExPASy Swiss-Prot
Match: CYAC3_RAT (Cytochrome b ascorbate-dependent protein 3 OS=Rattus norvegicus GN=Cybasc3 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.790e-31
Identity = 81/190 (42.63%), Postives = 109/190 (57.37%), Query Frame = 1
Query:    4 RGGLSLASDNKDLIFNVHPVLMVIGLVLLNGEAMLAYRTVS---GTKKLRKLVHLSLQFIAFLLSLIGVWAALKFHNDKGIDNFYSLHSWLGLACVFLFGIQWAAGFTTFWYPGGSKNGRASLLPWHVFLGVYIYALAVATAATGILEKVTFLQTN--HVISRYSTEALLVNSLGILIVVLGGFVILALI 558
            RGG   A D   L+FN HPVLMV G+V+L G A L YR  +   G K   K++H +L  +AF ++++G+ A   FHN   I + YSLHSWLG+  V LF  QW  GF  F  P  S+  R+ L P HVF G  I +L++A+  +GI EK+ F+  N     S    EA+  NS GIL+V  G  V+  L+
Sbjct:   32 RGGF--AWDGTVLMFNWHPVLMVSGMVVLYGAASLVYRLPASWVGPKLPWKVLHAALHLLAFTVTVVGLTAVFGFHNHSKITHLYSLHSWLGITTVALFACQWFLGFAVFLLPWASQWLRSLLKPVHVFFGACILSLSIASVISGINEKLFFVLKNATRPYSSLPGEAVFANSTGILVVSFGLLVLYILL 219          
BLAST of CK934804 vs. ExPASy Swiss-Prot
Match: CYAC3_MOUSE (Cytochrome b ascorbate-dependent protein 3 OS=Mus musculus GN=Cybasc3 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.790e-31
Identity = 79/190 (41.58%), Postives = 108/190 (56.84%), Query Frame = 1
Query:    4 RGGLSLASDNKDLIFNVHPVLMVIGLVLLNGEAMLAYRTVS---GTKKLRKLVHLSLQFIAFLLSLIGVWAALKFHNDKGIDNFYSLHSWLGLACVFLFGIQWAAGFTTFWYPGGSKNGRASLLPWHVFLGVYIYALAVATAATGILEKVTFLQTNHV--ISRYSTEALLVNSLGILIVVLGGFVILALI 558
            RGG   A D   L+FN HPVLMV G+V+L G A L YR  S   G +   K++H +L  +AF  +++G+ A  +FHN   I + YSLHSWLG+  V LF  QW  GF  F  P  S+  R+ L P HVF G  I +L++ +  +GI EK+ F+  N     S    EA+  NS G+L+V  G  V+  L+
Sbjct:   32 RGGF--AWDGTVLMFNWHPVLMVAGMVVLYGAASLVYRLPSSWVGPRLPWKVLHAALHLLAFTCTVVGLIAVFRFHNHSRIAHLYSLHSWLGITTVVLFACQWFLGFAVFLLPWASQWLRSLLKPLHVFFGACILSLSITSVISGINEKLFFVLKNATKPYSSLPGEAVFANSTGLLVVAFGLLVLYVLL 219          
BLAST of CK934804 vs. ExPASy Swiss-Prot
Match: CY561_PONAB (Cytochrome b561 OS=Pongo abelii GN=CYB561 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.790e-31
Identity = 71/185 (38.38%), Postives = 106/185 (57.30%), Query Frame = 1
Query:    4 RGGLSLASDNKDLIFNVHPVLMVIGLVLLNGEAMLAYRTVSG-TKKLRKLVHLSLQFIAFLLSLIGVWAALKFHNDKGIDNFYSLHSWLGLACVFLFGIQWAAGFTTFWYPGGSKNGRASLLPWHVFLGVYIYALAVATAATGILEKVTFLQTNHVISRYSTEALLVNSLGILIVVLGGFVILAL 555
            RGG++  SD   L FN HP+ MVIGL+ L G+A+L YR      K+  K++H  L   A +++L+G+ A   +H  +G  + YSLHSW G+    L+ +QW  GF+ F +PG S + R+   P H+F G  I+ L+V TA  G+ E + F +     S +  E +L N LG+L+   GG V+  L
Sbjct:   39 RGGIAWESD---LQFNAHPLCMVIGLIFLQGDALLVYRVFRNEAKRTTKVLHGLLHIFALVIALVGLVAVFDYHRKEGYADLYSLHSWCGILVFVLYFVQWLVGFSFFLFPGASFSLRSRYRPQHIFFGATIFLLSVGTALLGLKEALLF-KLRDKYSAFEPEGVLANVLGLLLACFGGAVLYIL 219          
BLAST of CK934804 vs. ExPASy Swiss-Prot
Match: CY561_HUMAN (Cytochrome b561 OS=Homo sapiens GN=CYB561 PE=2 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 4.790e-31
Identity = 72/185 (38.92%), Postives = 104/185 (56.22%), Query Frame = 1
Query:    4 RGGLSLASDNKDLIFNVHPVLMVIGLVLLNGEAMLAYRTVSG-TKKLRKLVHLSLQFIAFLLSLIGVWAALKFHNDKGIDNFYSLHSWLGLACVFLFGIQWAAGFTTFWYPGGSKNGRASLLPWHVFLGVYIYALAVATAATGILEKVTFLQTNHVISRYSTEALLVNSLGILIVVLGGFVILAL 555
            RGG++  SD   L FN HP+ MVIGL+ L G A+L YR      K+  K++H  L   A +++L+G+ A   +H  KG  + YSLHSW G+    L+ +QW  GF+ F +PG S + R+   P H+F G  I+ L+V TA  G+ E + F       S +  E +L N LG+L+   GG V+  L
Sbjct:   39 RGGIAWESD---LQFNAHPLCMVIGLIFLQGNALLVYRVFRNEAKRTTKVLHGLLHIFALVIALVGLVAVFDYHRKKGYADLYSLHSWCGILVFVLYFVQWLVGFSFFLFPGASFSLRSRYRPQHIFFGATIFLLSVGTALLGLKEALLF-NLGGKYSAFEPEGVLANVLGLLLACFGGAVLYIL 219          
BLAST of CK934804 vs. ExPASy Swiss-Prot
Match: CYAC3_BOVIN (Cytochrome b ascorbate-dependent protein 3 OS=Bos taurus GN=CYBASC3 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.256e-31
Identity = 78/184 (42.39%), Postives = 105/184 (57.07%), Query Frame = 1
Query:   22 ASDNKDLIFNVHPVLMVIGLVLLNGEAMLAYRTVS---GTKKLRKLVHLSLQFIAFLLSLIGVWAALKFHNDKGIDNFYSLHSWLGLACVFLFGIQWAAGFTTFWYPGGSKNGRASLLPWHVFLGVYIYALAVATAATGILEKVTFLQTN--HVISRYSTEALLVNSLGILIVVLGGFVILALI 558
            A D   L+FN HPVLMV G+V+L   A L YR      G +   K  H ++  +AFLL+++G+ A  +FHN   I + YSLHSWLG+  VFLF  QW  GF+ F  P  S   R+ L P HVF G  I +LA+A+  +GI EK+ F   N     S   +EA+  N  G+L+VV G  V+  L+
Sbjct:   36 AWDGSMLMFNWHPVLMVTGMVVLYSAASLVYRLPQSWVGPRLPWKSGHAAMHLLAFLLTVLGLHAVFEFHNHAKIPHLYSLHSWLGITTVFLFACQWFLGFSVFLLPWASMWLRSLLKPIHVFFGASILSLAIASVVSGINEKLFFSLKNGTKTYSNLPSEAVFANCAGMLVVVFGLLVLYILL 219          
BLAST of CK934804 vs. ExPASy Swiss-Prot
Match: CYBR1_DANRE (Cytochrome b reductase 1 OS=Danio rerio GN=cybrd1 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.067e-30
Identity = 71/170 (41.76%), Postives = 99/170 (58.24%), Query Frame = 1
Query:   46 FNVHPVLMVIGLVLLNGEAMLAYR---TVSGTKKLRKLVHLSLQFIAFLLSLIGVWAALKFHNDKGIDNFYSLHSWLGLACVFLFGIQWAAGFTTFWYPGGSKNGRASLLPWHVFLGVYIYALAVATAATGILEKVTFLQTNHVISRYSTEALLVNSLGILIVVLGGFVI 546
            FN HP+LMVIG + L G A++ YR   T   +K++ KL+H  L  +AF+L++I V A   FHN K I N YSLHSW+GLA V L+  Q   G   +  P      RA+L+P H++ G++I+   +A A  GI EK+ F   +        EA+LVN LG+LI   G  V+
Sbjct:   45 FNWHPLLMVIGFIFLQGIAIVVYRLPWTWRCSKQMMKLIHAGLHILAFILAVISVVAVFVFHNAKNIPNMYSLHSWVGLAAVVLYPSQIVLGIAVYLIPVTPVRVRAALMPLHIYSGLFIFISVIAAALMGITEKLIFSLKSPAYKDSPPEAVLVNVLGLLIAAFGALVV 214          
BLAST of CK934804 vs. ExPASy Swiss-Prot
Match: CY561_MOUSE (Cytochrome b561 OS=Mus musculus GN=Cyb561 PE=2 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 1.067e-30
Identity = 71/185 (38.38%), Postives = 106/185 (57.30%), Query Frame = 1
Query:    4 RGGLSLASDNKDLIFNVHPVLMVIGLVLLNGEAMLAYRTVSG-TKKLRKLVHLSLQFIAFLLSLIGVWAALKFHNDKGIDNFYSLHSWLGLACVFLFGIQWAAGFTTFWYPGGSKNGRASLLPWHVFLGVYIYALAVATAATGILEKVTFLQTNHVISRYSTEALLVNSLGILIVVLGGFVILAL 555
            RGG++  S    L FNVHP+ MVIG++ L G+A+L YR      K+  K++H  L   AF+++L+G+ A   +H  KG  + YSLHSW G+    L+ +QW  GF+ F +PG S + R+   P H+F G  I+  +V TA  G+ E + F +     S +  E +L N LG+L+V  G  V+  L
Sbjct:   38 RGGIAWESS---LQFNVHPLCMVIGMIFLQGDALLVYRVFRREAKRTTKILHGLLHVFAFIIALVGLVAVFDYHKKKGYADLYSLHSWCGILVFVLYFVQWLVGFSFFLFPGASFSLRSRYRPQHIFFGATIFLFSVGTALLGLKEALLF-KLGSKYSTFEPEGVLANVLGLLLVCFGVVVLYIL 218          
The following BLAST results are available for this feature:
BLAST of CK934804 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
CY561_PIG5.659e-3241.08Cytochrome b561 OS=Sus scrofa GN=CYB561 PE=2 SV=1[more]
CYBR1_XENLA9.652e-3239.20Cytochrome b reductase 1 OS=Xenopus laevis GN=cybr... [more]
CYBR1_XENTR4.790e-3138.64Cytochrome b reductase 1 OS=Xenopus tropicalis GN=... [more]
CYAC3_RAT4.790e-3142.63Cytochrome b ascorbate-dependent protein 3 OS=Ratt... [more]
CYAC3_MOUSE4.790e-3141.58Cytochrome b ascorbate-dependent protein 3 OS=Mus ... [more]
CY561_PONAB4.790e-3138.38Cytochrome b561 OS=Pongo abelii GN=CYB561 PE=2 SV=... [more]
CY561_HUMAN4.790e-3138.92Cytochrome b561 OS=Homo sapiens GN=CYB561 PE=2 SV=... [more]
CYAC3_BOVIN6.256e-3142.39Cytochrome b ascorbate-dependent protein 3 OS=Bos ... [more]
CYBR1_DANRE1.067e-3041.76Cytochrome b reductase 1 OS=Danio rerio GN=cybrd1 ... [more]
CY561_MOUSE1.067e-3038.38Cytochrome b561 OS=Mus musculus GN=Cyb561 PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004226_F04 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IF_F04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934804 ID=CK934804; Name=CK934804; organism=Citrus sinensis; type=EST; length=744bp
GGGAGAGGAGGCTTGTCTCTTGCCTCCGATAACAAAGATCTCATATTTAA
TGTTCATCCGGTTCTTATGGTGATCGGTCTCGTACTCTTGAATGGCGAAG
CTATGCTAGCATACAGGACAGTTTCAGGGACAAAAAAGCTCAGAAAATTG
GTTCATCTAAGCTTGCAATTCATTGCTTTTCTTTTAAGCTTGATTGGTGT
TTGGGCTGCTCTGAAATTCCACAATGACAAGGGTATTGATAATTTCTACA
GCCTGCATTCATGGTTGGGACTAGCTTGCGTTTTCCTATTTGGCATCCAG
TGGGCTGCTGGATTTACAACCTTTTGGTATCCAGGGGGCTCGAAAAATGG
TAGAGCTTCCTTGCTGCCATGGCATGTGTTCCTTGGGGTTTACATATATG
CCCTAGCTGTTGCTACTGCTGCCACCGGAATCTTAGAGAAAGTCACTTTC
CTTCAGACCAACCACGTCATAAGTCGTTATTCTACCGAGGCCTTGCTTGT
GAACTCTCTAGGAATTTTGATTGTCGTTCTAGGAGGATTTGTTATTCTTG
CTCTTATTACTCCTGAGAACGGCAAGTCGGAAGTTCTCAGAGCATCGGAA
TAGGCATTTTATGAATTCATCCATGATTCACAGGCGAGTAAGGTGTATTT
ATACTCCAAGAGAAATACAGGATTTGTTCTTTTCAGAAAATGGATGTATC
AATTATGACAATTCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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