CK934843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934843 vs. ExPASy Swiss-Prot
Match: PSA3_SPIOL (Proteasome subunit alpha type-3 OS=Spinacia oleracea GN=PAG1 PE=2 SV=1) HSP 1 Score: 365.925 bits (938), Expect = 1.024e-100 Identity = 177/191 (92.67%), Postives = 184/191 (96.34%), Query Frame = 1 Query: 88 MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCEDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKAEIEKLKLSEMTCRLGVI 660 MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGT +GIKC+DGIV+GVEKLI SKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIV RAKSEATNYESVYGE +PVKELA RVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYM+EPSGISYRYFGAAIGKG+QAAK EIEKLKLSEMTCR G+I Sbjct: 1 MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTAVGIKCKDGIVLGVEKLIQSKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVARAKSEATNYESVYGEAVPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMVEPSGISYRYFGAAIGKGKQAAKTEIEKLKLSEMTCREGII 191
BLAST of CK934843 vs. ExPASy Swiss-Prot
Match: PSA3_ARATH (Proteasome subunit alpha type-3 OS=Arabidopsis thaliana GN=PAG1 PE=1 SV=2) HSP 1 Score: 361.303 bits (926), Expect = 2.523e-99 Identity = 175/191 (91.62%), Postives = 185/191 (96.86%), Query Frame = 1 Query: 88 MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCEDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKAEIEKLKLSEMTCRLGVI 660 MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTV+GIKC+DGIVMGVEKLIASKMMLPGSNRRIHSVHRH+GMAVAGLAADGRQIV RAKSEA +YESVYG+ +PVKEL++RVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKG+QAAK EIEKL LSEMTC+ GVI Sbjct: 1 MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVVGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHAGMAVAGLAADGRQIVARAKSEARSYESVYGDAVPVKELSERVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGKQAAKTEIEKLNLSEMTCKEGVI 191
BLAST of CK934843 vs. ExPASy Swiss-Prot
Match: PSA3_ORYSJ (Proteasome subunit alpha type-3 OS=Oryza sativa subsp. japonica GN=PAG1 PE=2 SV=1) HSP 1 Score: 351.288 bits (900), Expect = 2.611e-96 Identity = 167/191 (87.43%), Postives = 181/191 (94.76%), Query Frame = 1 Query: 88 MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCEDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKAEIEKLKLSEMTCRLGVI 660 MSSIGTGYDLSVTTFSPDGRVFQ+EYA KAVDNSGTV+GIKC+DGIV+GVEKL+ SKMML GSNRRIHSVH HSG+AVAGLAADGRQIV+RAKSEA +YE VYGEPI VKELA RVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSG+SY+YFGAA+GKGRQAAK EIEKLKLSE+TCR G++ Sbjct: 1 MSSIGTGYDLSVTTFSPDGRVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMMLEGSNRRIHSVHWHSGLAVAGLAADGRQIVSRAKSEAASYEKVYGEPISVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGVSYKYFGAALGKGRQAAKTEIEKLKLSELTCREGIV 191
BLAST of CK934843 vs. ExPASy Swiss-Prot
Match: PSA3_DICDI (Proteasome subunit alpha type-3 OS=Dictyostelium discoideum GN=psmA3 PE=2 SV=2) HSP 1 Score: 255.758 bits (652), Expect = 1.493e-67 Identity = 114/187 (60.96%), Postives = 155/187 (82.89%), Query Frame = 1 Query: 88 MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCEDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKAEIEKLKLSEMTCR 648 MSS+G+GYDL V+T+SPDG++FQ++YA KAV+NSGT++ IK +DG+V+GVEKL+ SKM+ GSNRR+H + H G+A+AG AD RQ++TRA+SEA NY+S YG+PIP+K L+QR+ASY H+ TLY +RPFGC + + G D+ GPQL+++EPSG YFGA++GKG+QAAK E+EK+K SEMTCR Sbjct: 1 MSSVGSGYDLYVSTYSPDGKLFQVDYANKAVENSGTLVAIKAKDGVVLGVEKLVPSKMLCSGSNRRVHHIDTHVGVAIAGFLADARQLITRARSEAKNYKSTYGQPIPIKVLSQRIASYNHMHTLYGSVRPFGCSIAITGIDQYGPQLFLVEPSGSCVGYFGASLGKGKQAAKNELEKIKFSEMTCR 187
BLAST of CK934843 vs. ExPASy Swiss-Prot
Match: PSA3_ACACA (Proteasome subunit alpha type-3 (Fragment) OS=Acanthamoeba castellanii PE=2 SV=1) HSP 1 Score: 252.677 bits (644), Expect = 1.264e-66 Identity = 122/185 (65.95%), Postives = 153/185 (82.70%), Query Frame = 1 Query: 94 SIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCEDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKAEIEKLKLSEMTCR 648 SIGTGYDLS TTFSPDGRVFQ+EYAAKAVDNSGT +G++ +DG+V+ VEKL+ SKM++P +NRRIH+V RH G+A++GL ADGRQ+V+R ++EAT+Y YG I K L +R++++V L +LY +RPFG VILG D++GPQLYMIEPSGIS+ YFG AIGKG +AAK EIEKLKLSEMT R Sbjct: 1 SIGTGYDLSSTTFSPDGRVFQVEYAAKAVDNSGTALGLRVKDGVVLAVEKLLVSKMLVPNTNRRIHTVDRHCGLAMSGLVADGRQLVSRGRAEATSYREFYGTDISGKVLNERLSNFVQLYSLYGSVRPFGTSVILGCVDKNGPQLYMIEPSGISWGYFGVAIGKGARAAKTEIEKLKLSEMTAR 185
BLAST of CK934843 vs. ExPASy Swiss-Prot
Match: PSA3_RAT (Proteasome subunit alpha type-3 OS=Rattus norvegicus GN=Psma3 PE=1 SV=3) HSP 1 Score: 247.284 bits (630), Expect = 5.310e-65 Identity = 122/188 (64.89%), Postives = 146/188 (77.66%), Query Frame = 1 Query: 88 MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCEDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYD-RDGPQLYMIEPSGISYRYFGAAIGKGRQAAKAEIEKLKLSEMTCR 648 MSSIGTGYDLS +TFSPDGRVFQ+EYA KAV+NS T IGI+C+DG+V GVEKL+ SK+ GSN+R+ +V RH GMAVAGL AD R + A+ EA+N+ S +G IP+K LA RVA YVH TLY +RPFGC +LG Y DG QLYMI+PSG+SY Y+G AIGK RQAAK EIEKL++ EMTCR Sbjct: 1 MSSIGTGYDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCR 188
BLAST of CK934843 vs. ExPASy Swiss-Prot
Match: PSA3_MOUSE (Proteasome subunit alpha type-3 OS=Mus musculus GN=Psma3 PE=1 SV=3) HSP 1 Score: 247.284 bits (630), Expect = 5.310e-65 Identity = 122/188 (64.89%), Postives = 146/188 (77.66%), Query Frame = 1 Query: 88 MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCEDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYD-RDGPQLYMIEPSGISYRYFGAAIGKGRQAAKAEIEKLKLSEMTCR 648 MSSIGTGYDLS +TFSPDGRVFQ+EYA KAV+NS T IGI+C+DG+V GVEKL+ SK+ GSN+R+ +V RH GMAVAGL AD R + A+ EA+N+ S +G IP+K LA RVA YVH TLY +RPFGC +LG Y DG QLYMI+PSG+SY Y+G AIGK RQAAK EIEKL++ EMTCR Sbjct: 1 MSSIGTGYDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSANDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCR 188
BLAST of CK934843 vs. ExPASy Swiss-Prot
Match: PSA3_HUMAN (Proteasome subunit alpha type-3 OS=Homo sapiens GN=PSMA3 PE=1 SV=2) HSP 1 Score: 247.284 bits (630), Expect = 5.310e-65 Identity = 122/188 (64.89%), Postives = 146/188 (77.66%), Query Frame = 1 Query: 88 MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCEDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYD-RDGPQLYMIEPSGISYRYFGAAIGKGRQAAKAEIEKLKLSEMTCR 648 MSSIGTGYDLS +TFSPDGRVFQ+EYA KAV+NS T IGI+C+DG+V GVEKL+ SK+ GSN+R+ +V RH GMAVAGL AD R + A+ EA+N+ S +G IP+K LA RVA YVH TLY +RPFGC +LG Y DG QLYMI+PSG+SY Y+G AIGK RQAAK EIEKL++ EMTCR Sbjct: 1 MSSIGTGYDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCR 188
BLAST of CK934843 vs. ExPASy Swiss-Prot
Match: PSA3_BOVIN (Proteasome subunit alpha type-3 OS=Bos taurus GN=PSMA3 PE=1 SV=3) HSP 1 Score: 247.284 bits (630), Expect = 5.310e-65 Identity = 122/188 (64.89%), Postives = 146/188 (77.66%), Query Frame = 1 Query: 88 MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCEDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYD-RDGPQLYMIEPSGISYRYFGAAIGKGRQAAKAEIEKLKLSEMTCR 648 MSSIGTGYDLS +TFSPDGRVFQ+EYA KAV+NS T IGI+C+DG+V GVEKL+ SK+ GSN+R+ +V RH GMAVAGL AD R + A+ EA+N+ S +G IP+K LA RVA YVH TLY +RPFGC +LG Y DG QLYMI+PSG+SY Y+G AIGK RQAAK EIEKL++ EMTCR Sbjct: 1 MSSIGTGYDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCR 188
BLAST of CK934843 vs. ExPASy Swiss-Prot
Match: PSA3_DROME (Proteasome subunit alpha type-3 OS=Drosophila melanogaster GN=Prosalpha7 PE=1 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.314e-52 Identity = 104/189 (55.03%), Postives = 133/189 (70.37%), Query Frame = 1 Query: 88 MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCEDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDR-DGPQLYMIEPSGISYRYFGAAIGKGRQAAKAEIEKLKLSEMTCRL 651 MS+IGTGYDLS + FSPDGRVFQI+YA+KAV+ SGTVIGI+ +D +V+ VEK+I SK+ P + RI ++ ++ GMAVAGL ADG + A+ EA NY + + IP+K L RVA YVH TLY +RPFG +IL +D +GPQLY IEPSG S+ YF A GK +Q AK E+EKLK+ T L Sbjct: 1 MSTIGTGYDLSASQFSPDGRVFQIDYASKAVEKSGTVIGIRGKDAVVLAVEKIITSKLYEPDAGGRIFTIEKNIGMAVAGLVADGNFVADIARQEAANYRQQFEQAIPLKHLCHRVAGYVHAYTLYSAVRPFGLSIILASWDEVEGPQLYKIEPSGSSFGYFACASGKAKQLAKTEMEKLKMDMRTDEL 189 The following BLAST results are available for this feature:
BLAST of CK934843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934843 ID=CK934843; Name=CK934843; organism=Citrus sinensis; type=EST; length=662bpback to top |