CK934850
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934850 vs. ExPASy Swiss-Prot
Match: YCF1_CITSI (Putative membrane protein ycf1 OS=Citrus sinensis GN=ycf1-A PE=3 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.999e-56 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1 Query: 4 VPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNLAREKNQLIQLKFFIWANSRLEDLICMNRYWFNTNNGSRFSMVRVHMYPRLKIR 315 VPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNLAREKNQLIQLKFFIWANSRLEDLICMNRYWFNTNNGSRFSMVRVHMYPRLKIR Sbjct: 1726 VPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNLAREKNQLIQLKFFIWANSRLEDLICMNRYWFNTNNGSRFSMVRVHMYPRLKIR 1829
BLAST of CK934850 vs. ExPASy Swiss-Prot
Match: YCF1_GOSHI (Putative membrane protein ycf1 OS=Gossypium hirsutum GN=ycf1 PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.503e-36 Identity = 71/104 (68.27%), Postives = 83/104 (79.81%), Query Frame = 1 Query: 4 VPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNLAREKNQLIQLKFFIWANSRLEDLICMNRYWFNTNNGSRFSMVRVHMYPRLKIR 315 VPE IL P RRELR I FNS+++NGM +N VF NN K G+VL KNK+L +K +LI+LKFF+W N RLEDL CMNRYWFNTNNGSRFSM+R+ MYPRLKIR Sbjct: 1789 VPENILSPNHRRELRIRISFNSRDKNGMHRNAVFLNNVKNCGQVLTKNKHLDSDKKKLIKLKFFLWPNYRLEDLACMNRYWFNTNNGSRFSMIRIRMYPRLKIR 1892
BLAST of CK934850 vs. ExPASy Swiss-Prot
Match: YCF1_GOSBA (Putative membrane protein ycf1 OS=Gossypium barbadense GN=ycf1 PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.503e-36 Identity = 71/104 (68.27%), Postives = 83/104 (79.81%), Query Frame = 1 Query: 4 VPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNLAREKNQLIQLKFFIWANSRLEDLICMNRYWFNTNNGSRFSMVRVHMYPRLKIR 315 VPE IL P RRELR I FNS+++NGM +N VF NN K G+VL KNK+L +K +LI+LKFF+W N RLEDL CMNRYWFNTNNGSRFSM+R+ MYPRLKIR Sbjct: 1786 VPENILSPNHRRELRIRISFNSRDKNGMHRNAVFLNNVKNCGQVLTKNKHLDSDKKKLIKLKFFLWPNYRLEDLACMNRYWFNTNNGSRFSMIRIRMYPRLKIR 1889
BLAST of CK934850 vs. ExPASy Swiss-Prot
Match: YCF1_BUXMI (Putative membrane protein ycf1 OS=Buxus microphylla GN=ycf1-A PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.109e-34 Identity = 71/106 (66.98%), Postives = 83/106 (78.30%), Query Frame = 1 Query: 4 VPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGG--GRVLDKNKNLAREKNQLIQLKFFIWANSRLEDLICMNRYWFNTNNGSRFSMVRVHMYPRLKIR 315 VPE I P+RRRELR ICFNS N+N + +NPVFFN K GR LD+NK+L +K +LI+LK F+W N +LEDL CMNRYWFNTNNGSRFSM R+HMYPRLKIR Sbjct: 1754 VPENISSPRRRRELRIRICFNSGNKNFVDRNPVFFNENKVKHCGRFLDENKHLDTDKKKLIKLKCFLWPNYQLEDLACMNRYWFNTNNGSRFSMSRIHMYPRLKIR 1859
BLAST of CK934850 vs. ExPASy Swiss-Prot
Match: YCF1_EUCGG (Putative membrane protein ycf1 OS=Eucalyptus globulus subsp. globulus GN=ycf1 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.471e-34 Identity = 68/103 (66.02%), Postives = 81/103 (78.64%), Query Frame = 1 Query: 4 VPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNLAREKNQLIQLKFFIWANSRLEDLICMNRYWFNTNNGSRFSMVRVHMYPRLKI 312 VPE +L KRRRELR ICFNS+ +NG+ KNPVF NN K G LDK K+ EK +LI+LKFF+W N RLEDL CMNRYWF+TNNG RF+M+R+HMYPRL+I Sbjct: 1776 VPEKVLSTKRRRELRIRICFNSRKRNGIHKNPVFCNNVKNWGEFLDKRKHF--EKKKLIKLKFFLWPNYRLEDLSCMNRYWFDTNNGGRFTMIRIHMYPRLQI 1876
BLAST of CK934850 vs. ExPASy Swiss-Prot
Match: YCF1_VITVI (Putative membrane protein ycf1 OS=Vitis vinifera GN=ycf1 PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 9.388e-34 Identity = 69/107 (64.49%), Postives = 85/107 (79.44%), Query Frame = 1 Query: 4 VPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNLAREKNQLIQLK---FFIWANSRLEDLICMNRYWFNTNNGSRFSMVRVHMYPRLKIR 315 VPE IL P+RRR+ R LICFN +N++G+ +NPVF N G + LD+NK+L R+KNQLI+LK F+W N RLEDL CMNRYWF+TNNGS FSM+R+HMYPRLKIR Sbjct: 1788 VPENILSPRRRRKFRILICFNLRNRSGVARNPVFCN-GNSCNKFLDENKHLDRDKNQLIKLKKLKLFLWPNYRLEDLACMNRYWFDTNNGSCFSMIRIHMYPRLKIR 1893
BLAST of CK934850 vs. ExPASy Swiss-Prot
Match: YCF1_NICTO (Putative membrane protein ycf1 OS=Nicotiana tomentosiformis GN=ycf1-A PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.958e-31 Identity = 67/105 (63.81%), Postives = 80/105 (76.19%), Query Frame = 1 Query: 4 VPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFN--NGKGGGRVLDKNKNLAREKNQLIQLKFFIWANSRLEDLICMNRYWFNTNNGSRFSMVRVHMYPRLKI 312 VPE IL +RRRELR FNS N NG+ +N VF N N K + LD+ K L +EKN+LI+LKFF+W N RLEDL CMNRYWF+TNNGSRFS++R+HMYPRLKI Sbjct: 1787 VPENILWSRRRRELRIRSFFNSLNWNGVDRNSVFCNENNVKNWSQFLDERKPLYKEKNELIKLKFFLWPNYRLEDLACMNRYWFDTNNGSRFSILRIHMYPRLKI 1891
BLAST of CK934850 vs. ExPASy Swiss-Prot
Match: YCF1_COFAR (Putative membrane protein ycf1 OS=Coffea arabica GN=ycf1 PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.557e-31 Identity = 64/102 (62.75%), Postives = 79/102 (77.45%), Query Frame = 1 Query: 4 VPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNLAREKNQLIQLKFFIWANSRLEDLICMNRYWFNTNNGSRFSMVRVHMYPRLK 309 VPE IL + RRELR LICF SKN+N + KN VF ++LDK K+L ++K +LI+LKFF+W N RLEDL CMNRYWF+TNNGSRFSM+R++MYPRLK Sbjct: 1772 VPENILSTRCRRELRILICFTSKNRNSVDKNSVFCTKNNSS-QLLDKRKDLDKDKKELIKLKFFLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIYMYPRLK 1872
BLAST of CK934850 vs. ExPASy Swiss-Prot
Match: YCF1_MORIN (Putative membrane protein ycf1 OS=Morus indica GN=ycf1 PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.339e-31 Identity = 64/102 (62.75%), Postives = 77/102 (75.49%), Query Frame = 1 Query: 4 VPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNLAREKNQLIQLKFFIWANSRLEDLICMNRYWFNTNNGSRFSMVRVHMYPRLK 309 VPETIL P+ RRELR LICFNS+N+NG+ N F N K VL+K+K +N +I+LKFF+W N RLED CMNRYWF+TNNGSRFSMVR+HMYP+ K Sbjct: 1757 VPETILSPRHRRELRILICFNSRNRNGIPSNAFFCNENKVKSPVLNKSKI---NQNNIIRLKFFLWPNYRLEDFACMNRYWFDTNNGSRFSMVRIHMYPQFK 1855
BLAST of CK934850 vs. ExPASy Swiss-Prot
Match: YCF1_TOBAC (Putative membrane protein ycf1 OS=Nicotiana tabacum GN=ycf1 PE=3 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 4.361e-31 Identity = 66/105 (62.86%), Postives = 80/105 (76.19%), Query Frame = 1 Query: 4 VPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFN--NGKGGGRVLDKNKNLAREKNQLIQLKFFIWANSRLEDLICMNRYWFNTNNGSRFSMVRVHMYPRLKI 312 VPE IL +RRRELR FNS N NG+ +N VF N N K + LD+ K L +EKN+LI+LKFF+W N RLEDL CMNRYWF+TNNGSRFS++R+HMYP+LKI Sbjct: 1796 VPENILWSRRRRELRIRSLFNSLNWNGIDRNSVFCNENNVKNWSQFLDERKPLYKEKNELIKLKFFLWPNYRLEDLACMNRYWFDTNNGSRFSILRIHMYPQLKI 1900 The following BLAST results are available for this feature:
BLAST of CK934850 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934850 ID=CK934850; Name=CK934850; organism=Citrus sinensis; type=EST; length=825bpback to top |