CK934857

Overview
NameCK934857
Unique NameCK934857
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934857 vs. ExPASy Swiss-Prot
Match: RL191_ARATH (60S ribosomal protein L19-1 OS=Arabidopsis thaliana GN=RPL19A PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 2.306e-68
Identity = 129/155 (83.23%), Postives = 138/155 (89.03%), Query Frame = 1
Query:   64 MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTL 528
            MVSLKLQKRL+ASV+KCG+GKVWLDPNE ++ISMANSRQNIRKLVKDGFIIRKPTKIHSRSRAR+MK AK KGRHSGYGKRKGTREARLPTK+              KYRE+KKIDKHMYHDMYM+VKGNVFKNKRVLMESIHKSKAEKAREKTL
Sbjct:    1 MVSLKLQKRLAASVMKCGKGKVWLDPNESSDISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARKMKIAKMKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDKHMYHDMYMRVKGNVFKNKRVLMESIHKSKAEKAREKTL 155          
BLAST of CK934857 vs. ExPASy Swiss-Prot
Match: RL192_ARATH (60S ribosomal protein L19-2 OS=Arabidopsis thaliana GN=RPL19B PE=2 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 3.011e-68
Identity = 129/155 (83.23%), Postives = 136/155 (87.74%), Query Frame = 1
Query:   64 MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTL 528
            MVSLK+QKRL+ASV+KCG+GKVWLDPNE  +ISMANSRQNIRKLVKDGFIIRKPTKIHSRSRAR + EAKRKGRHSGYGKRKGTREARLPTKI              KYRESKKID+HMYHDMYMKVKGNVFKNKRVLMESIHK KAEKAREKTL
Sbjct:    1 MVSLKIQKRLAASVMKCGKGKVWLDPNESGDISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRFLSKYRESKKIDRHMYHDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTL 155          
BLAST of CK934857 vs. ExPASy Swiss-Prot
Match: RL193_ARATH (60S ribosomal protein L19-3 OS=Arabidopsis thaliana GN=RPL19C PE=2 SV=3)

HSP 1 Score: 254.218 bits (648), Expect = 7.417e-67
Identity = 127/155 (81.94%), Postives = 137/155 (88.39%), Query Frame = 1
Query:   64 MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTL 528
            MVSLKLQKRL++SVLKCG+ KVWLDPNE ++ISMANSRQNIRKLVKDGFIIRKPTKIHSRSRAR++  AKRKGRHSGYGKRKGTREARLPTK+              KYRE+KKID+HMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTL
Sbjct:    1 MVSLKLQKRLASSVLKCGKRKVWLDPNEGSDISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARQLNIAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDRHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTL 155          
BLAST of CK934857 vs. ExPASy Swiss-Prot
Match: RL19_DROME (60S ribosomal protein L19 OS=Drosophila melanogaster GN=RpL19 PE=1 SV=2)

HSP 1 Score: 217.624 bits (553), Expect = 7.693e-56
Identity = 106/169 (62.72%), Postives = 124/169 (73.37%), Query Frame = 1
Query:   64 MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLLTSLRLSAPRTRPA 570
            M SLKLQKRL+ASVL+CG+ KVWLDPNE+NEI+  NSRQNIRKL+KDG II+KP  +HSR R R+  EA+RKGRH G+GKRKGT  AR+PTK+              KYR+SKKID+H+YHD+YMK KGNVFKNKRVLME IHK KAEK R K L         + R A
Sbjct:    1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSRYRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREA 169          
BLAST of CK934857 vs. ExPASy Swiss-Prot
Match: RL19_XENLA (60S ribosomal protein L19 OS=Xenopus laevis GN=rpl19 PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 4.667e-53
Identity = 102/169 (60.36%), Postives = 123/169 (72.78%), Query Frame = 1
Query:   64 MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLLTSLRLSAPRTRPA 570
            M  L+LQKRL++SVL+CG+ KVWLDPNE NEI+ ANSRQ IRKLVKDG IIRKP  +HSR+R R+   A+RKGRH G GKRKGT  AR+P K+              +YRESKKID+HMYH +Y+KVKGNVFKNKR+LME IHK KA+KAR+K L         +T+ A
Sbjct:    1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLVKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKLSWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEA 169          
BLAST of CK934857 vs. ExPASy Swiss-Prot
Match: RL19_RAT (60S ribosomal protein L19 OS=Rattus norvegicus GN=Rpl19 PE=1 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 4.667e-53
Identity = 101/169 (59.76%), Postives = 123/169 (72.78%), Query Frame = 1
Query:   64 MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLLTSLRLSAPRTRPA 570
            M  L+LQKRL++SVL+CG+ KVWLDPNE NEI+ ANSRQ IRKL+KDG IIRKP  +HSR+R R+   A+RKGRH G GKRKGT  AR+P K+              +YRESKKID+HMYH +Y+KVKGNVFKNKR+LME IHK KA+KAR+K L         +T+ A
Sbjct:    1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEA 169          
BLAST of CK934857 vs. ExPASy Swiss-Prot
Match: RL19_PONAB (60S ribosomal protein L19 OS=Pongo abelii GN=RPL19 PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 4.667e-53
Identity = 101/169 (59.76%), Postives = 123/169 (72.78%), Query Frame = 1
Query:   64 MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLLTSLRLSAPRTRPA 570
            M  L+LQKRL++SVL+CG+ KVWLDPNE NEI+ ANSRQ IRKL+KDG IIRKP  +HSR+R R+   A+RKGRH G GKRKGT  AR+P K+              +YRESKKID+HMYH +Y+KVKGNVFKNKR+LME IHK KA+KAR+K L         +T+ A
Sbjct:    1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEA 169          
BLAST of CK934857 vs. ExPASy Swiss-Prot
Match: RL19_MOUSE (60S ribosomal protein L19 OS=Mus musculus GN=Rpl19 PE=1 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 4.667e-53
Identity = 101/169 (59.76%), Postives = 123/169 (72.78%), Query Frame = 1
Query:   64 MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLLTSLRLSAPRTRPA 570
            M  L+LQKRL++SVL+CG+ KVWLDPNE NEI+ ANSRQ IRKL+KDG IIRKP  +HSR+R R+   A+RKGRH G GKRKGT  AR+P K+              +YRESKKID+HMYH +Y+KVKGNVFKNKR+LME IHK KA+KAR+K L         +T+ A
Sbjct:    1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEA 169          
BLAST of CK934857 vs. ExPASy Swiss-Prot
Match: RL19_MACFA (60S ribosomal protein L19 OS=Macaca fascicularis GN=RPL19 PE=2 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 4.667e-53
Identity = 101/169 (59.76%), Postives = 123/169 (72.78%), Query Frame = 1
Query:   64 MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLLTSLRLSAPRTRPA 570
            M  L+LQKRL++SVL+CG+ KVWLDPNE NEI+ ANSRQ IRKL+KDG IIRKP  +HSR+R R+   A+RKGRH G GKRKGT  AR+P K+              +YRESKKID+HMYH +Y+KVKGNVFKNKR+LME IHK KA+KAR+K L         +T+ A
Sbjct:    1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEA 169          
BLAST of CK934857 vs. ExPASy Swiss-Prot
Match: RL19_HUMAN (60S ribosomal protein L19 OS=Homo sapiens GN=RPL19 PE=1 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 4.667e-53
Identity = 101/169 (59.76%), Postives = 123/169 (72.78%), Query Frame = 1
Query:   64 MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLLTSLRLSAPRTRPA 570
            M  L+LQKRL++SVL+CG+ KVWLDPNE NEI+ ANSRQ IRKL+KDG IIRKP  +HSR+R R+   A+RKGRH G GKRKGT  AR+P K+              +YRESKKID+HMYH +Y+KVKGNVFKNKR+LME IHK KA+KAR+K L         +T+ A
Sbjct:    1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEA 169          
The following BLAST results are available for this feature:
BLAST of CK934857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
RL191_ARATH2.306e-6883.2360S ribosomal protein L19-1 OS=Arabidopsis thalian... [more]
RL192_ARATH3.011e-6883.2360S ribosomal protein L19-2 OS=Arabidopsis thalian... [more]
RL193_ARATH7.417e-6781.9460S ribosomal protein L19-3 OS=Arabidopsis thalian... [more]
RL19_DROME7.693e-5662.7260S ribosomal protein L19 OS=Drosophila melanogast... [more]
RL19_XENLA4.667e-5360.3660S ribosomal protein L19 OS=Xenopus laevis GN=rpl... [more]
RL19_RAT4.667e-5359.7660S ribosomal protein L19 OS=Rattus norvegicus GN=... [more]
RL19_PONAB4.667e-5359.7660S ribosomal protein L19 OS=Pongo abelii GN=RPL19... [more]
RL19_MOUSE4.667e-5359.7660S ribosomal protein L19 OS=Mus musculus GN=Rpl19... [more]
RL19_MACFA4.667e-5359.7660S ribosomal protein L19 OS=Macaca fascicularis G... [more]
RL19_HUMAN4.667e-5359.7660S ribosomal protein L19 OS=Homo sapiens GN=RPL19... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004226_A07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IF_A07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934857 ID=CK934857; Name=CK934857; organism=Citrus sinensis; type=EST; length=905bp
GGGGAACCCTTGTTGGTTGGCCACTGATCGCGAGAGACAGAGGGGGAGAG
AAGAGAAGGGAAAATGGTGTCGTTGAAGTTACAGAAGCGGCTCTCCGCTA
GCGTCCTCAAGTGCGGACGTGGCAAGGTCTGGCTTGACCCTAATGAGGTC
AACGAAATCTCCATGGCCAACTCCAGGCAGAACATTAGGAAATTGGTGAA
GGATGGTTTCATCATCAGGAAGCCAACAAAGATCCACTCCCGTTCTCGCG
CTCGCAGAATGAAGGAAGCCAAGAGGAAGGGCCGTCACTCTGGATATGGT
AAGAGAAAGGGTACTAGGGAGGCGAGGCTTCCCACCAAAATCCTCTGGAT
GAGAAGGATGCGTGTGCTCAGGCGGTTGCTCCGCAAATACCGTGAGTCGA
AGAAAATTGACAAGCACATGTACCATGACATGTACATGAAGGTCAAGGGT
AATGTATTTAAGAACAAGCGTGTCCTCATGGAGAGTATCCACAAGTCAAA
GGCTGAAAAGGCAAGAGAGAAGACTCTTCTGACCAGTTTGAGGCTAAGCG
CGCCAAGAACAAGGCCAGCAGGGAGAGAAAGCTGGCCAGGAGAGAAGAGC
GACTAGCACAGGGACCTGGAGAGAGGGCAGTACCAGCACCCCAACCAGCT
GAGGGAGCTAAGAAAGCTAAGAAGTGATTGCTGATACATCGATGATGGAG
ACTGAAGATTGATAACTTATATATGTTAATGTTGGTTCTGGTTTCTTTGT
AGGAGTTTGTTTCCCAAGTTATTTTGTTTTCTGTTTAATGGCAAATTATT
TACTTATAAAGCCTTGAATTTTGGAACCATATGAACCGTTTGTAGTTTCT
TGTTATGTTGAATGATGAGTATTATGTTAAAAAAAAAAAAAAAAAAAAAA
AAAAA
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