CK934861

Overview
NameCK934861
Unique NameCK934861
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934861 vs. ExPASy Swiss-Prot
Match: KRP1_ARATH (Cyclin-dependent kinase inhibitor 1 OS=Arabidopsis thaliana GN=KRP1 PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.399e-16
Identity = 64/185 (34.59%), Postives = 91/185 (49.19%), Query Frame = 3
Query:  168 ASYIQLRNRTID--TGEKTSTENRCSSPGLELSDHDRVXXXXXXXXXXXERIEFVDLKDESGDVEAETSTYYGCRERRDATLSSELEVEAGEE--------SDSLDSTAKPSSEANSRRRSTVEN---------------MPAKSEIEDFFAEAEKKLVKQFSQKYNFDFVKEEPMEGRYKWVGL 647
            ++Y+QLR+R I     EK+S+ +     G+  S                ++ E + L++E  D + ETSTY    +R+   L   L  E  EE        S   +S  K S +     R T+E                MP +SEIEDFF EAEK+L ++F +KYNFDF KE+P+EGRY+WV L
Sbjct:   18 STYMQLRSRRIVYVRSEKSSSVSVVGDNGVSSS---------CSGSNEYKKKELIHLEEEDKDGDTETSTYRRGTKRK---LFENLREEEKEELSKSMENYSSEFESAVKESLDCCCSGRKTMEETVTAEEEEKAKLMTEMPTESEIEDFFVEAEKQLKEKFKKKYNFDFEKEKPLEGRYEWVKL 190          
BLAST of CK934861 vs. ExPASy Swiss-Prot
Match: KRP6_ARATH (Cyclin-dependent kinase inhibitor 6 OS=Arabidopsis thaliana GN=KRP6 PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.469e-13
Identity = 44/107 (41.12%), Postives = 61/107 (57.01%), Query Frame = 3
Query:  324 VDLKDESGDVEAETSTYYGCRERRDATLSSELEVEAGEESDSLDSTAKPSSEANSRRRSTVENMPAKSEIEDFFAEAEKK--LVKQFSQKYNFDFVKEEPMEGRYKW 638
            VDL+D   + E ETST+     R++ +  SE     GE +  ++S     S A  R++  V   P  +EIED F+E E +    KQF +KYNFD V +EP+EGRYKW
Sbjct:   95 VDLEDHQIETETETSTFITSNFRKETSPVSE---GLGETTTEMES-----SSATKRKQPGVRKTPTAAEIEDLFSELESQDDKKKQFIEKYNFDIVNDEPLEGRYKW 193          
BLAST of CK934861 vs. ExPASy Swiss-Prot
Match: KRP7_ARATH (Cyclin-dependent kinase inhibitor 7 OS=Arabidopsis thaliana GN=KRP7 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 4.211e-13
Identity = 40/115 (34.78%), Postives = 68/115 (59.13%), Query Frame = 3
Query:  312 RIEFVDLKDESGDV-EAETSTYYGCRERRDATLSSELEVEAGEESDSLDSTAKPSSEANSRRRSTVENMPAKSEIEDFFAEAEKKLVKQFSQKYNFDFVKEEPMEGRYKWVGLRP 653
            R+ F DL  E+ ++ E E ST      R+    SSE     GE ++   +T +   +  + ++  +E  P ++E++DFF+ AE+   K+F++KYN+D V + P+EGRY+WV L+P
Sbjct:   86 RLPFSDL--EAHEISETEISTLLTNNFRKQGISSSE---NLGETAEMDSATTEMRDQRKTEKKKKMEKSPTQAELDDFFSAAERYEQKRFTEKYNYDIVNDTPLEGRYQWVSLKP 195          
BLAST of CK934861 vs. ExPASy Swiss-Prot
Match: KRP2_ARATH (Cyclin-dependent kinase inhibitor 2 OS=Arabidopsis thaliana GN=KRP2 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.381e-13
Identity = 49/121 (40.50%), Postives = 69/121 (57.02%), Query Frame = 3
Query:  312 RIEFVDLKDESGDV-EAETSTYYGCRERRDATLSSELEVEAGEESDSLDSTAKPSSEANSRRR--STVENMPAKSEIEDFFAEAEKKL---VKQFSQKYNFDFVKEEPM-EGRYKWVGLRP 653
            RIEFVDL++ +GD  E ETS  Y              ++   EES ++DS++    +  SRRR   ++     ++E+EDFF  AEK L   + + S KYNFDF K+EP+  GRY+WV L P
Sbjct:  102 RIEFVDLEENNGDDRETETSWIYD-------------DLNKSEESMNMDSSSVAVEDVESRRRLRKSLHETVKEAELEDFFQVAEKDLRNKLLECSMKYNFDFEKDEPLGGGRYEWVKLNP 209          
The following BLAST results are available for this feature:
BLAST of CK934861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
KRP1_ARATH1.399e-1634.59Cyclin-dependent kinase inhibitor 1 OS=Arabidopsis... [more]
KRP6_ARATH2.469e-1341.12Cyclin-dependent kinase inhibitor 6 OS=Arabidopsis... [more]
KRP7_ARATH4.211e-1334.78Cyclin-dependent kinase inhibitor 7 OS=Arabidopsis... [more]
KRP2_ARATH9.381e-1340.50Cyclin-dependent kinase inhibitor 2 OS=Arabidopsis... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004225_H06 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IVF_H06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934861 ID=CK934861; Name=CK934861; organism=Citrus sinensis; type=EST; length=845bp
GGGGGAGAAAGTTGAGGGCTCAAGGGCTTACAGAAATTCCAGTGATGGAG
GTCGCTCGAGTTGGCGTAAGAACGCGAACGCGAGCACGAGCTGAAGCCCT
GGCGGCTGCAACTTCTTCCAAGTTAGCTAAGAGAAGGAAACTAGAGTGTG
ATGAAGTCAAAAGCTTTGCGTCTTATATTCAGCTCAGGAATCGTACAATT
GATACTGGTGAGAAAACGTCGACGGAGAATCGGTGTTCAAGTCCTGGCTT
AGAATTATCTGATCATGATCGTGTTTCGACTTCATGTTGCTCCAGTCACG
GATCCAGTGAGAGAATAGAATTTGTAGATCTGAAGGATGAGAGTGGTGAT
GTGGAAGCTGAAACATCGACGTATTATGGATGCAGAGAAAGGAGAGACGC
GACGCTGTCCAGCGAGCTTGAAGTTGAAGCTGGAGAAGAATCAGACAGCC
TGGATTCAACTGCGAAGCCATCATCAGAGGCAAACTCTCGCCGTAGATCA
ACGGTGGAGAACATGCCTGCCAAGTCTGAAATTGAGGACTTCTTCGCTGA
AGCTGAGAAAAAGCTCGTAAAACAATTTTCTCAGAAGTATAACTTCGACT
TCGTGAAAGAGGAGCCAATGGAAGGGCGTTACAAGTGGGTAGGGTTGAGG
CCATGAAGAAGATTACCAATGAAGAAATTAAATTAAAAACAATGGCGATA
TCTTCTGCAGATATACGTATTGTACTTCTAGGTATCAGTGATTGATGATT
TAGTTTCTGTTGTTTAGTGTAAGGTGTGTTTCGTATTTTTTGTACAGCTC
GTCAGCCGTACTGGAAAAGAAGCTCTGAGACTGAGAGAGAGATTT
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