CK934862

Overview
NameCK934862
Unique NameCK934862
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934862 vs. ExPASy Swiss-Prot
Match: CP74A_ARATH (Allene oxide synthase, chloroplastic OS=Arabidopsis thaliana GN=CYP74A PE=1 SV=3)

HSP 1 Score: 152.525 bits (384), Expect = 3.519e-47
Identity = 77/152 (50.66%), Postives = 101/152 (66.45%), Query Frame = 3
Query:  102 RTIPGSYGWPLLGPISDRLDYFWFQGPETFFRKRIEKHKSAVFRTNIPPTWPLFLNVNPNVIAVLDCKSFAHLFDMEIVEKKNILVGDFMPSVKFTGGLRVSAYLDTSEPKHAQLKGFAMDTLKRSSKLWVSEVVSSLDTLFDTVEKELSEK 557
            R IPG+YG P++GPI DR DYF+ QG E FF+ RI K+ S V+R N+PP    F+  NP V+A+LD KSF  LFD++ VEKK++  G +MPS + TGG R+ +YLD SEPKH +LK      LK S      E  ++   LFD++EKELS K
Sbjct:   55 RNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPG--AFIAENPQVVALLDGKSFPVLFDVDKVEKKDLFTGTYMPSTELTGGYRILSYLDPSEPKHEKLKNLLFFLLKSSRNRIFPEFQATYSELFDSLEKELSLK 204          

HSP 2 Score: 57.7658 bits (138), Expect = 3.519e-47
Identity = 26/81 (32.10%), Postives = 49/81 (60.49%), Query Frame = 1
Query:  595 FNFLSKSIVGADPKADAEIAENGFSMLDKWLALQILPTVSINILQPLEEIFLHSFAYPFALVSGDYNKLHNFVEKEGKEVV 837
            FNFL+++  G +P AD ++  +   ++ KW+   + P +SI + + +EE  +H+F+ P ALV  DY +L+ F  +   E++
Sbjct:  218 FNFLARAFYGTNP-ADTKLKADAPGLITKWVLFNLHPLLSIGLPRVIEEPLIHTFSLPPALVKSDYQRLYEFFLESAGEIL 297          
BLAST of CK934862 vs. ExPASy Swiss-Prot
Match: C74A2_PARAR (Allene oxide synthase OS=Parthenium argentatum GN=CYP74A2 PE=1 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 4.379e-41
Identity = 77/156 (49.36%), Postives = 102/156 (65.38%), Query Frame = 3
Query:  102 RTIPGSYGWPLLGPISDRLDYFWFQGP-ETFFRKRIEKHKSAVFRTNIPPTWPLFLNVNPNVIAVLDCKSFAHLFDMEIVEKKNILVGDFMPSVKFTGGLRVSAYLDTSEPKHAQLKGFAMDTLKRSSKLWVSEVVSSLDTLFDTVEKELSEKNSK 566
            R IPGSYG P   PI DRL+YF+  G  + +FR R++K++S VFR N+PP    F++ NP VI +LD KSF  LFD+  VEKK++  G +MPS K TGG RV +YLD SEP+HAQLK      LK SS   + +  ++   LF+ +E EL+ KN K
Sbjct:    9 REIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPG--PFVSSNPKVIVLLDAKSFPILFDVSKVEKKDLFTGTYMPSTKLTGGYRVLSYLDPSEPRHAQLKNLLFFMLKNSSNRVIPQFETTYTELFEGLEAELA-KNGK 161          

HSP 2 Score: 47.3654 bits (111), Expect = 4.379e-41
Identity = 19/87 (21.84%), Postives = 48/87 (55.17%), Query Frame = 1
Query:  583 QKCVFNFLSKSIVGADPKADAEIAENGFSMLDKWLALQILPTVSINILQPLEEIFLHSFAYPFALVSGDYNKLHNFVEKEGKEVVQR 843
            ++  F FL ++   ++P+ + ++  +  +++  W+   + PT+ + +   L+E  LH+F  P  L+   YNKL+++ +     V+++
Sbjct:  169 EQAAFRFLGRAYFNSNPE-ETKLGTSAPTLISSWVLFNLAPTLDLGLPWFLQEPLLHTFRLPAFLIKSTYNKLYDYFQSVATPVMEQ 254          
BLAST of CK934862 vs. ExPASy Swiss-Prot
Match: C74A2_ORYSJ (Allene oxide synthase 2 OS=Oryza sativa subsp. japonica GN=CYP74A2 PE=2 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 4.596e-37
Identity = 67/155 (43.23%), Postives = 93/155 (60.00%), Query Frame = 3
Query:  102 RTIPGSYGWPLLGPISDRLDYFWFQGPETFFRKRIEKHKSAVFRTNIPPTWPLFLNVNPNVIAVLDCKSFAHLFDMEIVEKKNILVGDFMPSVKFTGGLRVSAYLDTSEPKHAQLKGFAMDTLKRSSKLWVSEVVSSLDTLFDTVEKELSEKNSK 566
            R +PGSYG P +  + DRLD+++ QG + +F  R E++ S V R N+PP    F+  +P V+A+LD KSF  LFD+  VEK+++  G FMPS   TGG RV AYLD SEP HA++K   +  L      +V    S+   L DTVE +L+    K
Sbjct:   10 RPVPGSYGVPFVSAVRDRLDFYYLQGQDKYFESRAERYGSTVVRINVPPG--PFMARDPRVVALLDAKSFPVLFDVAKVEKRDVFTGTFMPSTSLTGGYRVCAYLDPSEPNHAKIKQLLLSLLVSRKDAFVPVFRSNFGALLDTVESQLASGGGK 162          

HSP 2 Score: 42.743 bits (99), Expect = 4.596e-37
Identity = 19/72 (26.39%), Postives = 35/72 (48.61%), Query Frame = 1
Query:  595 FNFLSKSIVGADPKADAEIAENGFSMLDKWLALQILPTVSINILQPLEEIFLHSFAYPFALVSGDYNKLHNF 810
            F F+ ++  G  P A + +   G +    WL  Q+ P  ++ +   +E+  LH+   P  L+S DY  L+ +
Sbjct:  174 FEFIGEAYFGVRPSASSSLGTGGPTKAALWLLWQLAPLTTLGLPMIIEDPLLHTLPLPPFLISSDYKALYAY 245          
BLAST of CK934862 vs. ExPASy Swiss-Prot
Match: C74A1_ORYSJ (Allene oxide synthase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CYP74A1 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.541e-34
Identity = 61/151 (40.40%), Postives = 85/151 (56.29%), Query Frame = 3
Query:  102 RTIPGSYGWPLLGPISDRLDYFWFQGP-ETFFRKRIEKHKSAVFRTNIPPTWPLFLNVNPNVIAVLDCKSFAHLFDMEIVEKKNILVGDFMPSVKFTGGLRVSAYLDTSEPKHAQLKGFAMDTLKRSSKLWVSEVVSSLDTLFDTVEKELS 551
            R +PG YG P++G I DR +YF+  G  + FF  R+  H+S V R N+PP    F+  +P V+A+LD  SF  LFD  +V+K ++  G FMPS   TGG RV +YLD SEP HA LK      L    +  + +       LF  +E +L+
Sbjct:   48 RKVPGDYGPPVVGAIRDRYEYFYGPGGRDGFFAARVRAHRSTVVRLNMPPG--PFVARDPRVVALLDAASFPVLFDTSLVDKTDLFTGTFMPSTDLTGGYRVLSYLDPSEPNHAPLKTLLFYLLSHRRQQVIPKFREVYGDLFGLMENDLA 196          

HSP 2 Score: 56.6102 bits (135), Expect = 1.541e-34
Identity = 30/92 (32.61%), Postives = 49/92 (53.26%), Query Frame = 1
Query:  562 ASYMVPLQKCVFNFLSKSIVGADPKADAEIAENGFSMLDKWLALQILPTVSINILQPLEEIFLHSFAYPFALVSGDYNKLHNFVEKEGKEVV 837
            A + V      F FL + ++G DP A + +  +G  ++ KW+  Q+ P +S+ +   +E+  LHS   P ALV  DY++L +F     K VV
Sbjct:  201 ADFGVHNDAAAFGFLCQGLLGRDP-AKSALGRDGPKLITKWVLFQLSPLLSLGLPTLVEDTLLHSLRLPPALVKKDYDRLADFFRDAAKAVV 291          
BLAST of CK934862 vs. ExPASy Swiss-Prot
Match: CP74_LINUS (Allene oxide synthase, chloroplastic OS=Linum usitatissimum GN=CYP74A PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.025e-34
Identity = 74/152 (48.68%), Postives = 97/152 (63.82%), Query Frame = 3
Query:  102 RTIPGSYGWPLLGPISDRLDYFWFQGPETFFRKRIEKHKSAVFRTNIPPTWPLFLNVNPNVIAVLDCKSFAHLFDMEIVEKKNILVGDFMPSVKFTGGLRVSAYLDTSEPKHAQLKGFAMDTLKRSSKLWVSEVVSSLDTLFDTVEKELSEK 557
            R IPG YG P +GPI DRLDYF+ QG E FF+ R++K+KS V+R N+PP    F+  NP VI +LD KSF  LFDM  VEKK++  G +MPS + TGG R+ +YLD SEP H +LK    + +K      + E  SS   L + VE +L+ K
Sbjct:   73 RQIPGDYGLPGIGPIQDRLDYFYNQGREEFFKSRLQKYKSTVYRANMPPG--PFIASNPRVIVLLDAKSFPVLFDMSKVEKKDLFTGTYMPSTELTGGYRILSYLDPSEPNHTKLKQLLFNLIKNRRDYVIPEFSSSFTDLCEVVEYDLATK 222          
BLAST of CK934862 vs. ExPASy Swiss-Prot
Match: C74A3_ORYSJ (Allene oxide synthase 3 OS=Oryza sativa subsp. japonica GN=CYP74A3 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.787e-29
Identity = 62/150 (41.33%), Postives = 86/150 (57.33%), Query Frame = 3
Query:  102 RTIPGSYGWPLLGPISDRLDYFWFQGPETFFRKRIEKHKSA-VFRTNIPPTWPLFLNVNPNVIAVLDCKSFAHLFDMEIVEKKNILVGDFMPSVKFTGGLRVSAYLDTSEPKHAQLKGFAMDTLKRSSKLWVSEVVSSLDTLFDTVEKEL 548
            R IPG YG P   P+ DRLDYF+FQG E +FR R+ +H  A V R N+PP    F++ NP V+A+LD +SF  L D  +V+K + L G +MPS    GG R  A+LD ++P+HA++K   M               ++   +FD VE  L
Sbjct:   30 REIPGGYGVPFFSPLRDRLDYFYFQGAEEYFRSRVARHGGATVLRVNMPPG--PFISGNPRVVALLDARSFRVLLDDSMVDKADTLDGTYMPSRALFGGHRPLAFLDAADPRHAKIKRVVMSLAAARMHHVAPAFRAAFAAMFDAVEAGL 177          

HSP 2 Score: 34.6538 bits (78), Expect = 3.787e-29
Identity = 21/71 (29.58%), Postives = 35/71 (49.30%), Query Frame = 1
Query:  592 VFNFLSKSIVGADPKADAEIAENGFSMLDKWLALQILPTVSINILQ-PLEEIFLHSFAYPFALVSGDYNKL 801
            + +F   ++ G +P +   + +   +    WLA Q+ P  S  +   PLEE+ LH+F+ P  LV   Y  L
Sbjct:  191 MLDFTCAALFGGEPPSKV-VGDGAVTKAMAWLAFQLHPIASKVVKPWPLEELLLHTFSLPPFLVRRGYADL 260          
BLAST of CK934862 vs. ExPASy Swiss-Prot
Match: C74A4_ORYSJ (Allene oxide synthase 4 OS=Oryza sativa subsp. japonica GN=CYP74A4 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.416e-28
Identity = 62/150 (41.33%), Postives = 87/150 (58.00%), Query Frame = 3
Query:  102 RTIPGSYGWPLLGPISDRLDYFWFQGPETFFRKRIEKHKSA-VFRTNIPPTWPLFLNVNPNVIAVLDCKSFAHLFDMEIVEKKNILVGDFMPSVKFTGGLRVSAYLDTSEPKHAQLKGFAMDTLKRSSKLWVSEVVSSLDTLFDTVEKEL 548
            R IPG YG P L P+ DRLDY++FQG + FFR R+ +H  A V R N+PP    FL  +P V+A+LD +SF  L D  +V+K + L G FMPS+   GG R  A+LD ++P+HA++K   M               ++   +FD V+  L
Sbjct:   30 REIPGGYGVPFLSPLRDRLDYYYFQGADEFFRSRVARHGGATVLRVNMPPG--PFLAGDPRVVALLDARSFRVLLDDSMVDKADTLDGTFMPSLALFGGHRPLAFLDAADPRHAKIKRVVMSLAAARMHHVAPAFRAAFAAMFDEVDAGL 177          

HSP 2 Score: 33.4982 bits (75), Expect = 1.416e-28
Identity = 20/71 (28.17%), Postives = 36/71 (50.70%), Query Frame = 1
Query:  592 VFNFLSKSIVGADPKADAEIAENGFSMLDKWLALQILPTVSINILQ-PLEEIFLHSFAYPFALVSGDYNKL 801
            + +F   ++ G  P + A + +   +   KWL  Q+ P  S  +   PLE++ LH+F  P  LV  +Y ++
Sbjct:  193 MLDFTCAALFGGAPPSKA-MGDAAVTKAVKWLIFQLHPLASKVVKPWPLEDLLLHTFRLPPFLVRREYGEI 262          
The following BLAST results are available for this feature:
BLAST of CK934862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
CP74A_ARATH3.519e-4750.66Allene oxide synthase, chloroplastic OS=Arabidopsi... [more]
C74A2_PARAR4.379e-4149.36Allene oxide synthase OS=Parthenium argentatum GN=... [more]
C74A2_ORYSJ4.596e-3743.23Allene oxide synthase 2 OS=Oryza sativa subsp. jap... [more]
C74A1_ORYSJ1.541e-3440.40Allene oxide synthase 1, chloroplastic OS=Oryza sa... [more]
CP74_LINUS2.025e-3448.68Allene oxide synthase, chloroplastic OS=Linum usit... [more]
C74A3_ORYSJ3.787e-2941.33Allene oxide synthase 3 OS=Oryza sativa subsp. jap... [more]
C74A4_ORYSJ1.416e-2841.33Allene oxide synthase 4 OS=Oryza sativa subsp. jap... [more]
back to top
Properties
Property NameValue
Genbank descriptionCGF1004225_H07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IVF_H07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934862 ID=CK934862; Name=CK934862; organism=Citrus sinensis; type=EST; length=868bp
GGGGAATGAGCGTATCACCAGACATGCCCTCATCATCGCCCTTCCAGTCA
CAGTCGCTCTCCACACCCACTTCATCACCACCGTCCACGTCGCTCCCGCT
CCGAACAATCCCCGGATCCTACGGCTGGCCCCTTCTGGGCCCCATCTCCG
ACCGCCTCGACTATTTCTGGTTCCAGGGTCCTGAAACTTTCTTCAGAAAA
CGCATTGAAAAGCACAAGAGCGCGGTGTTCCGTACAAACATACCACCCAC
GTGGCCTTTGTTTCTCAACGTAAACCCCAATGTCATTGCTGTTCTTGACT
GCAAATCTTTTGCTCATCTCTTTGATATGGAGATTGTGGAGAAGAAAAAT
ATTCTTGTTGGTGATTTCATGCCCAGTGTTAAGTTTACAGGAGGCTTGAG
GGTTAGTGCTTATCTTGATACTTCTGAGCCTAAACATGCCCAGCTCAAAG
GCTTCGCCATGGACACTCTGAAAAGAAGCTCAAAATTATGGGTATCAGAA
GTGGTATCAAGTCTGGACACACTGTTCGACACCGTCGAGAAAGAGCTCTC
CGAAAAGAACAGCAAGCTACATGGTCCCTTTACAAAAATGCGTCTTTAAC
TTCCTCTCAAAATCGATCGTGGGTGCCGACCCAAAAGCCGACGCCGAAAT
CGCCGAGAACGGCTTCTCCATGCTCGACAAGTGGCTGGCCTTGCAGATCC
TGCCCACAGTCAGCATAAACATCTTGCAGCCCCTTGAAGAGATCTTTCTT
CACTCTTTTGCTTACCCTTTTGCCCTTGTCAGTGGAGACTACAACAAGCT
CCACAACTTCGTTGAAAAGGAAGGCAAAGAAGTTGTGCAGCGGGNNNNNN
NCGAGTTTGGGCTAACAA
back to top