CK934882

Overview
NameCK934882
Unique NameCK934882
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK934882 vs. ExPASy Swiss-Prot
Match: PDCL3_HUMAN (Phosducin-like protein 3 OS=Homo sapiens GN=PDCL3 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.045e-25
Identity = 45/111 (40.54%), Postives = 65/111 (58.56%), Query Frame = 2 
Query:  500 CGLLMQCLEELARKYPATKFVKIISTDCIPNYPDRNLPTVLVYNNGAVKANYVGLRSF-GRRCTPEGVALVLCQSDPVLND-GQSGSDPSRKTVLEGVRKRLIEKVVAEHE 826
            C L+ Q L  LARK+P  KF+K IST CIPNYPDRNLPT+ VY  G +KA ++G   F G   T + +   L +S  ++ D  ++   P    +L  VR+ ++ K  ++ E
Sbjct:  127 CALINQHLSGLARKFPDVKFIKAISTTCIPNYPDRNLPTIFVYLEGDIKAQFIGPLVFGGMNLTRDELEWKLSESGAIMTDLEENPKKPIEDVLLSSVRRSVLMKRDSDSE 237

HSP 2 Score: 53.1434 bits (126), Expect = 3.045e-25
Identity = 23/50 (46.00%), Postives = 36/50 (72.00%), Query Frame = 1 
Query:  256 YRKKRLAEMREATKISRFGSVMPISGSDFVREVSQAPPDVWVVVILYKDG 405
            YR++RLAE +     ++FG V+ ISG D+V+EV++A   +WV++ LYK G
Sbjct:   74 YRRRRLAEWKATKLKNKFGEVLEISGKDYVQEVTKAGEGLWVILHLYKQG 123
[Close]
BLAST of CK934882 vs. ExPASy Swiss-Prot
Match: PDCL3_PONAB (Phosducin-like protein 3 OS=Pongo abelii GN=PDCL3 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 8.737e-25
Identity = 45/111 (40.54%), Postives = 64/111 (57.66%), Query Frame = 2 
Query:  500 CGLLMQCLEELARKYPATKFVKIISTDCIPNYPDRNLPTVLVYNNGAVKANYVGLRSF-GRRCTPEGVALVLCQSDPVLND-GQSGSDPSRKTVLEGVRKRLIEKVVAEHE 826
            C L+ Q L  LARK+P  KF+K IST CIPNYPDRNLPT+ VY  G +KA ++G   F G   T + +   L +S  ++ D  ++   P    +L  VR+  + K  ++ E
Sbjct:  127 CALINQHLSGLARKFPDVKFIKAISTTCIPNYPDRNLPTIFVYLEGDIKAQFIGPLVFGGMNLTRDELEWKLSESGAIMTDLEENPKKPIEDVLLSSVRRSALMKRDSDSE 237

HSP 2 Score: 52.373 bits (124), Expect = 8.737e-25
Identity = 23/50 (46.00%), Postives = 36/50 (72.00%), Query Frame = 1 
Query:  256 YRKKRLAEMREATKISRFGSVMPISGSDFVREVSQAPPDVWVVVILYKDG 405
            YR++RLAE +     ++FG V+ ISG D+V+EV++A   +WV++ LYK G
Sbjct:   74 YRRQRLAEWKVTKLKNKFGEVLEISGKDYVQEVTKAGEGLWVILHLYKQG 123
[Close]
BLAST of CK934882 vs. ExPASy Swiss-Prot
Match: VIAF1_DROME (Viral IAP-associated factor homolog OS=Drosophila melanogaster GN=viaf PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.245e-24
Identity = 38/110 (34.55%), Postives = 69/110 (62.73%), Query Frame = 2 
Query:  500 CGLLMQCLEELARKYPATKFVKIISTDCIPNYPDRNLPTVLVYNNGAVKANYVG-LRSFGRRCTPEGVALVLCQSDPVLNDGQSGSDPSRKTVLEGVRKRLIEKVVAEHE 826
            C L+   +++LA ++P TKFV+ ++T CIPN+P++NLPT+ +Y+ GA++  Y+G L   G + T E +  +L         GQ+G+ P+   + E  R ++ +K++A+ E
Sbjct:  135 CALIHHHMQQLAVRFPQTKFVRSVATTCIPNFPEKNLPTIFIYHEGALRKQYIGPLELRGDKLTAEELEFML---------GQAGAVPTE--ITEDPRPQIRDKMLADLE 233

HSP 2 Score: 57.3806 bits (137), Expect = 4.245e-24
Identity = 26/50 (52.00%), Postives = 37/50 (74.00%), Query Frame = 1 
Query:  256 YRKKRLAEMREATKISRFGSVMPISGSDFVREVSQAPPDVWVVVILYKDG 405
            YR++R+AEMR   + +RFGSV  ISG D+V EV++A   +WVV+ LY +G
Sbjct:   82 YRQRRIAEMRATAEKARFGSVREISGQDYVNEVTKAGEGIWVVLHLYANG 131
[Close]
BLAST of CK934882 vs. ExPASy Swiss-Prot
Match: PDCL3_BOVIN (Phosducin-like protein 3 OS=Bos taurus GN=PDCL3 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 2.683e-23
Identity = 48/105 (45.71%), Postives = 64/105 (60.95%), Query Frame = 2 
Query:  500 CGLLMQCLEELARKYPATKFVKIISTDCIPNYPDRNLPTVLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQSDPVLNDGQSGSDPSRKTVLEGVRKRLIEKVV 814
            C L+ Q L  LARK+P  KF+K IST CIP+YPDRNLPTV VY  G +KA ++G   FG      G+ L L + +  L+  +SG   + KT LE   K+ +E V+
Sbjct:  128 CALINQHLSALARKFPDVKFIKAISTTCIPSYPDRNLPTVFVYLEGDIKAQFIGPLVFG------GMNLTLDELEWKLS--ESG---AIKTSLEENPKKPVEDVL 221

HSP 2 Score: 52.373 bits (124), Expect = 2.683e-23
Identity = 23/50 (46.00%), Postives = 36/50 (72.00%), Query Frame = 1 
Query:  256 YRKKRLAEMREATKISRFGSVMPISGSDFVREVSQAPPDVWVVVILYKDG 405
            YR++RLAE +     ++FG V+ ISG D+V+EV++A   +WV++ LYK G
Sbjct:   75 YRQQRLAEWKATQLKNKFGEVLEISGKDYVQEVTKAGEGLWVILHLYKQG 124
[Close]
BLAST of CK934882 vs. ExPASy Swiss-Prot
Match: PDCL3_RAT (Phosducin-like protein 3 OS=Rattus norvegicus GN=Pdcl3 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.683e-23
Identity = 35/59 (59.32%), Postives = 41/59 (69.49%), Query Frame = 2 
Query:  500 CGLLMQCLEELARKYPATKFVKIISTDCIPNYPDRNLPTVLVYNNGAVKANYVGLRSFG 676
            C L+   L  LARK+P  KF+K IST CIPNYPDRNLPTV VY  G +KA ++G   FG
Sbjct:  128 CSLINHHLSGLARKFPDVKFIKAISTTCIPNYPDRNLPTVFVYREGDIKAQFIGPLVFG 186

HSP 2 Score: 52.7582 bits (125), Expect = 2.683e-23
Identity = 24/50 (48.00%), Postives = 36/50 (72.00%), Query Frame = 1 
Query:  256 YRKKRLAEMREATKISRFGSVMPISGSDFVREVSQAPPDVWVVVILYKDG 405
            YR++RLAE +     ++FG V+ ISG D+V+EV++A   +WVV+ LYK G
Sbjct:   75 YRQQRLAEWKATQLRNKFGEVLEISGKDYVQEVTKAGEGLWVVLHLYKQG 124
[Close]
BLAST of CK934882 vs. ExPASy Swiss-Prot
Match: PDCL3_MOUSE (Phosducin-like protein 3 OS=Mus musculus GN=Pdcl3 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 3.491e-23
Identity = 35/59 (59.32%), Postives = 41/59 (69.49%), Query Frame = 2 
Query:  500 CGLLMQCLEELARKYPATKFVKIISTDCIPNYPDRNLPTVLVYNNGAVKANYVGLRSFG 676
            C L+   L  LARK+P  KF+K IST CIPNYPDRNLPTV VY  G +KA ++G   FG
Sbjct:  128 CSLINHHLSGLARKFPDVKFIKAISTTCIPNYPDRNLPTVFVYREGDIKAQFIGPLVFG 186

HSP 2 Score: 52.373 bits (124), Expect = 3.491e-23
Identity = 23/50 (46.00%), Postives = 36/50 (72.00%), Query Frame = 1 
Query:  256 YRKKRLAEMREATKISRFGSVMPISGSDFVREVSQAPPDVWVVVILYKDG 405
            YR++RLAE +     ++FG V+ ISG D+V+EV++A   +WV++ LYK G
Sbjct:   75 YRQQRLAEWKATQLKNKFGEVLEISGKDYVQEVTKAGEGLWVILHLYKQG 124
[Close]
BLAST of CK934882 vs. ExPASy Swiss-Prot
Match: PDCL3_DANRE (Phosducin-like protein 3 OS=Danio rerio GN=pdcl3 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.868e-22
Identity = 34/59 (57.63%), Postives = 45/59 (76.27%), Query Frame = 2 
Query:  500 CGLLMQCLEELARKYPATKFVKIISTDCIPNYPDRNLPTVLVYNNGAVKANYVGLRSFG 676
            C L+ Q L +LARK+P +KF+K IS+ CIPNYPDRNLPT+ VY +G +KA ++G   FG
Sbjct:  125 CSLINQHLAQLARKFPQSKFLKSISSTCIPNYPDRNLPTLFVYRDGEMKAQFIGPLVFG 183

HSP 2 Score: 49.2914 bits (116), Expect = 2.868e-22
Identity = 24/50 (48.00%), Postives = 33/50 (66.00%), Query Frame = 1 
Query:  256 YRKKRLAEMREATKISRFGSVMPISGSDFVREVSQAPPDVWVVVILYKDG 405
            YR KRLAE +     + FG +  ISG D+V+EV++A   +WVV+ LYK G
Sbjct:   72 YRLKRLAEWKANQMKNVFGELKEISGQDYVQEVNKAGEGIWVVLHLYKQG 121
[Close]
BLAST of CK934882 vs. ExPASy Swiss-Prot
Match: PDCL2_HUMAN (Phosducin-like protein 2 OS=Homo sapiens GN=PDCL2 PE=1 SV=2)

HSP 1 Score: 62.003 bits (149), Expect = 1.683e-18
Identity = 29/59 (49.15%), Postives = 38/59 (64.41%), Query Frame = 2 
Query:  500 CGLLMQCLEELARKYPATKFVKIISTDCIPNYPDRNLPTVLVYNNGAVKANYVGLRSFG 676
            C L+ Q L  LARK+P TKFVK I   CI +Y D  LPT+ VY NG ++A ++G+   G
Sbjct:  125 CLLVNQHLSLLARKFPETKFVKAIVNSCIQHYHDNCLPTIFVYKNGQIEAKFIGIIECG 183

HSP 2 Score: 51.9878 bits (123), Expect = 1.683e-18
Identity = 23/48 (47.92%), Postives = 32/48 (66.67%), Query Frame = 1 
Query:  256 YRKKRLAEMREATKISRFGSVMPISGSDFVREVSQAPPDVWVVVILYK 399
            YRKKRL E +   K  +FG +  ISG+ +V EV+ A  DVWV++ LY+
Sbjct:   72 YRKKRLQEWKALKKKQKFGELREISGNQYVNEVTNAEEDVWVIIHLYR 119
[Close]
BLAST of CK934882 vs. ExPASy Swiss-Prot
Match: PDCL2_BOVIN (Phosducin-like protein 2 OS=Bos taurus GN=PDCL2 PE=2 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 6.256e-18
Identity = 28/59 (47.46%), Postives = 38/59 (64.41%), Query Frame = 2 
Query:  500 CGLLMQCLEELARKYPATKFVKIISTDCIPNYPDRNLPTVLVYNNGAVKANYVGLRSFG 676
            C L+ Q L  LARK+P TKFVK I+  CI +Y D  LPT+ VY NG ++  ++G+   G
Sbjct:  125 CLLVNQHLSLLARKFPETKFVKAIANSCIEHYHDNCLPTIFVYKNGQIEGKFIGIIECG 183

HSP 2 Score: 50.447 bits (119), Expect = 6.256e-18
Identity = 22/48 (45.83%), Postives = 32/48 (66.67%), Query Frame = 1 
Query:  256 YRKKRLAEMREATKISRFGSVMPISGSDFVREVSQAPPDVWVVVILYK 399
            YR+KRL E +   K  +FG +  ISG+ +V EV+ A  DVWV++ LY+
Sbjct:   72 YREKRLQEWKALKKKQKFGELREISGNQYVNEVTNAEKDVWVIIHLYR 119
[Close]
BLAST of CK934882 vs. ExPASy Swiss-Prot
Match: PDCL2_MOUSE (Phosducin-like protein 2 OS=Mus musculus GN=Pdcl2 PE=1 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 3.931e-17
Identity = 27/59 (45.76%), Postives = 37/59 (62.71%), Query Frame = 2 
Query:  500 CGLLMQCLEELARKYPATKFVKIISTDCIPNYPDRNLPTVLVYNNGAVKANYVGLRSFG 676
            C ++ Q L  LARK+P TKFVK I   CI +Y D  LPT+ VY NG ++  ++G+   G
Sbjct:  125 CLVVNQHLSVLARKFPETKFVKAIVNSCIEHYHDNCLPTIFVYKNGQIEGKFIGIIECG 183

HSP 2 Score: 49.6766 bits (117), Expect = 3.931e-17
Identity = 22/48 (45.83%), Postives = 32/48 (66.67%), Query Frame = 1 
Query:  256 YRKKRLAEMREATKISRFGSVMPISGSDFVREVSQAPPDVWVVVILYK 399
            YR+KRL E +   K  +FG +  ISG+ +V EV+ A  D+WVV+ LY+
Sbjct:   72 YREKRLQEWKALKKKQKFGELREISGNQYVNEVTNAEKDLWVVIHLYR 119
The following BLAST results are available for this feature:
BLAST of CK934882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
PDCL3_HUMAN3.045e-2540.54Phosducin-like protein 3 OS=Homo sapiens GN=PDCL3 ... [more]
PDCL3_PONAB8.737e-2540.54Phosducin-like protein 3 OS=Pongo abelii GN=PDCL3 ... [more]
VIAF1_DROME4.245e-2434.55Viral IAP-associated factor homolog OS=Drosophila ... [more]
PDCL3_BOVIN2.683e-2345.71Phosducin-like protein 3 OS=Bos taurus GN=PDCL3 PE... [more]
PDCL3_RAT2.683e-2359.32Phosducin-like protein 3 OS=Rattus norvegicus GN=P... [more]
PDCL3_MOUSE3.491e-2359.32Phosducin-like protein 3 OS=Mus musculus GN=Pdcl3 ... [more]
PDCL3_DANRE2.868e-2257.63Phosducin-like protein 3 OS=Danio rerio GN=pdcl3 P... [more]
PDCL2_HUMAN1.683e-1849.15Phosducin-like protein 2 OS=Homo sapiens GN=PDCL2 ... [more]
PDCL2_BOVIN6.256e-1847.46Phosducin-like protein 2 OS=Bos taurus GN=PDCL2 PE... [more]
PDCL2_MOUSE3.931e-1745.76Phosducin-like protein 2 OS=Mus musculus GN=Pdcl2 ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004225_G01 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IVF_G01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934882 ID=CK934882; Name=CK934882; organism=Citrus sinensis; type=EST; length=889bp
GGGGAAAGGAGGATGGCGGATTATCACTTTGTGTACAAAGATGTAGAAGG
AGCATCAACACAATGGGACGATATACAAAGGAAGCTCGGAAATTTGCCGC
CAAAGCCGCCTGCTTTCAAGCCCTCCGCCTTCGAACCGGCGGTGGACCCT
GATTCGGTCCCCAAAGACAAATCGTGGGTCGATGAGAAAACTGAAGAAGA
GCTTGAAGAGTTAGAGGATGACCCCGATCTAGATGATGACCGCTTCCTCG
AAGAATACAGGAAAAAGAGGTTGGCTGAGATGAGAGAAGCAACCAAGATA
TCTAGATTCGGATCAGTGATGCCAATTTCTGGATCAGATTTCGTGAGAGA
GGTTTCACAAGCTCCCCCTGATGTTTGGGTGGTTGTGATTCTCTACAAGG
ATGGGTACTTCTATTAAATTACTTTTGGTACATTGTTGATTTTCTTTAAT
ATATATTACTCTGATGTTTGTTTTCAAAATTTCTGATAGGTTTGCTGAGT
GTGGGCTGCTTATGCAATGCTTGGAAGAGTTGGCAAGAAAATACCCTGCA
ACAAAATTTGTTAAAATAATATCGACAGATTGCATTCCTAATTACCCAGA
TCGTAACCTTCCCACAGTATTGGTTTACAACAATGGTGCAGTGAAAGCAA
ATTATGTAGGTTTGCGTAGCTTTGGCCGGAGATGCACGCCTGAAGGTGTT
GCATTAGTTCTCTGTCAGTCAGATCCTGTGCTAAATGATGGTCAGAGTGG
AAGTGATCCATCTAGGAAAACTGTGCTTGAGGGAGTTCGAAAGAGGCTTA
TCGAGAAAGTTGTTGCAGAGCATGAAGATGATGACGATGGATCATCAAGT
GACTAGAATGACGATGGTTTCTATTAGATTAACCGGTAG
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