CK934888
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934888 vs. ExPASy Swiss-Prot
Match: GRP1_DAUCA (Glycine-rich RNA-binding protein OS=Daucus carota PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.034e-12 Identity = 34/41 (82.93%), Postives = 37/41 (90.24%), Query Frame = 1 Query: 298 IINNRETGRSRGFGFITFRDEKSMRHAI*GMNGQNLDGPNI 420 IIN+RETGRSRGFGF+TF+DEKSMR AI GMNGQ LDG NI Sbjct: 37 IINDRETGRSRGFGFVTFKDEKSMRDAIEGMNGQELDGRNI 77
BLAST of CK934888 vs. ExPASy Swiss-Prot
Match: GRP1_SINAL (Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.130e-12 Identity = 32/45 (71.11%), Postives = 39/45 (86.67%), Query Frame = 1 Query: 286 MPKSIINNRETGRSRGFGFITFRDEKSMRHAI*GMNGQNLDGPNI 420 + IIN+RETGRSRGFGF+TF+DEKSM+ AI GMNGQ+LDG +I Sbjct: 35 LDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSI 79
BLAST of CK934888 vs. ExPASy Swiss-Prot
Match: GRP2_SINAL (Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.700e-12 Identity = 32/41 (78.05%), Postives = 38/41 (92.68%), Query Frame = 1 Query: 298 IINNRETGRSRGFGFITFRDEKSMRHAI*GMNGQNLDGPNI 420 IIN+RETGRSRGFGF+TF+DEKSM+ AI GMNGQ+LDG +I Sbjct: 39 IINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSI 79
BLAST of CK934888 vs. ExPASy Swiss-Prot
Match: GRP1_SORBI (Glycine-rich RNA-binding protein 1 (Fragment) OS=Sorghum bicolor GN=GRP1 PE=2 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 9.922e-12 Identity = 28/45 (62.22%), Postives = 34/45 (75.56%), Query Frame = 1 Query: 286 MPKSIINNRETGRSRGFGFITFRDEKSMRHAI*GMNGQNLDGPNI 420 + II +RET RSRGFGF+TF E++MR AI GMNG+ LDG NI Sbjct: 14 LESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNI 58 HSP 2 Score: 31.5722 bits (70), Expect = 9.922e-12 Identity = 12/22 (54.55%), Postives = 19/22 (86.36%), Query Frame = 3 Query: 108 SSLHEAFSAYGDILDSKVRLNQ 173 +SLH AFS YG++L+SK+ L++ Sbjct: 1 NSLHSAFSTYGEVLESKIILDR 22
BLAST of CK934888 vs. ExPASy Swiss-Prot
Match: GRP7_ARATH (Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana GN=GRP7 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.493e-11 Identity = 31/41 (75.61%), Postives = 38/41 (92.68%), Query Frame = 1 Query: 298 IINNRETGRSRGFGFITFRDEKSMRHAI*GMNGQNLDGPNI 420 IIN+RETGRSRGFGF+TF+DEK+M+ AI GMNGQ+LDG +I Sbjct: 39 IINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSI 79
BLAST of CK934888 vs. ExPASy Swiss-Prot
Match: GRPA_MAIZE (Glycine-rich RNA-binding, abscisic acid-inducible protein OS=Zea mays GN=RAB15 PE=1 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.714e-11 Identity = 29/39 (74.36%), Postives = 35/39 (89.74%), Query Frame = 3 Query: 45 MASADVEFRCFVGGLAWATPDSSLHEAFSAYGDILDSKV 161 MA+ADVE+RCFVGGLAWAT + SL AF++YG+ILDSKV Sbjct: 1 MAAADVEYRCFVGGLAWATSNESLENAFASYGEILDSKV 39 The following BLAST results are available for this feature:
BLAST of CK934888 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK934888 ID=CK934888; Name=CK934888; organism=Citrus sinensis; type=EST; length=420bpback to top |