CK934906
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934906 vs. ExPASy Swiss-Prot
Match: CCD33_ARATH (Cyclin-D3-3 OS=Arabidopsis thaliana GN=CYCD3-3 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 2.135e-48 Identity = 79/178 (44.38%), Postives = 106/178 (59.55%), Query Frame = 3 Query: 198 QQQPHNSTF-LLDALYCSEENWEDELRVDCFQVQDGGLIXXXXXXXXXXSFYFINKTKTIPVPVPMLHEQDLSWQDDELSTLLSKEVPNRLYNILKTNPSLSRARSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVEETQVPLLLDLQVE 728 +++ N+ F +LD L+C EE+ E C + + F F+N L + D+ W DDELSTL+SK+ P LY+ + + L R +A+DW+ KV +HY F +LTALLAVNY DRF+ S + Q DKPWM+QL A+ACLSLAAKVEE +VP LLD QVE Sbjct: 6 EEESQNAPFCVLDGLFCEEESEFHEQVDLCDESVE--------------KFPFLNLG---------LSDHDMLWDDDELSTLISKQEPC-LYDEILDDEFLVLCREKALDWIFKVKSHYGFNSLTALLAVNYFDRFITSRKFQTDKPWMSQLTALACLSLAAKVEEIRVPFLLDFQVE 159 HSP 2 Score: 81.2629 bits (199), Expect = 2.135e-48 Identity = 37/61 (60.66%), Postives = 48/61 (78.69%), Query Frame = 2 Query: 728 DTKFVFEAKTIQRMEILVLSTLQWKMNPVTPLSFLDYIARRLGLKGYLCWEFLXRCDRILL 910 + ++VFEAKTIQRME+LVLSTL W+M+PVTP+SF D+I RR K + EFL RC+ +LL Sbjct: 160 EARYVFEAKTIQRMELLVLSTLDWRMHPVTPISFFDHIIRRYSFKSHHQLEFLSRCESLLL 220
BLAST of CK934906 vs. ExPASy Swiss-Prot
Match: CCD32_ARATH (Cyclin-D3-2 OS=Arabidopsis thaliana GN=CYCD3-2 PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.047e-47 Identity = 83/179 (46.37%), Postives = 103/179 (57.54%), Query Frame = 3 Query: 198 QQQPHNSTF-LLDALYCSEENWEDELRVDCFQVQDGGLIXXXXXXXXXXSFYFINKTKTIPVPVPMLHEQDLSWQDDELSTLLSKE-VPNRLYNILKTNPSLSRARSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVEETQVPLLLDLQVE 728 ++ N F +LD LYC EE E +D DG L F F+ P+L W DDE+ +L+SKE N + + L R EA+DW+L+V +HY FT+LTA+LAVNY DRF+ S +LQ DKPWM+QL AVA LSLAAKVEE QVPLLLDLQVE Sbjct: 7 EEASQNGAFCVLDGLYCEEETGFVEDDLD----DDGDLDFLEKSDESVVKFQFL----------PLLDM--FLWDDDEILSLISKENETNPCFGEQILDGFLVSCRKEALDWVLRVKSHYGFTSLTAILAVNYFDRFMTSIKLQTDKPWMSQLVAVASLSLAAKVEEIQVPLLLDLQVE 169 HSP 2 Score: 80.4925 bits (197), Expect = 1.047e-47 Identity = 34/61 (55.74%), Postives = 50/61 (81.97%), Query Frame = 2 Query: 728 DTKFVFEAKTIQRMEILVLSTLQWKMNPVTPLSFLDYIARRLGLKGYLCWEFLXRCDRILL 910 + +++FEAKTIQRME+L+LSTLQW+M+PVTP+SF D+I RR G K + +F +C+R+L+ Sbjct: 170 EARYLFEAKTIQRMELLILSTLQWRMHPVTPISFFDHIIRRFGSKWHQQLDFCRKCERLLI 230
BLAST of CK934906 vs. ExPASy Swiss-Prot
Match: CCD31_ARATH (Cyclin-D3-1 OS=Arabidopsis thaliana GN=CYCD3-1 PE=1 SV=3) HSP 1 Score: 148.673 bits (374), Expect = 4.436e-35 Identity = 84/176 (47.73%), Postives = 111/176 (63.07%), Query Frame = 3 Query: 201 QQPHNSTFLLDALYCSEENWEDELRVDCFQVQDGGLIXXXXXXXXXXSFYFINKTKTIPVPVPMLHEQDLSWQDDELSTLLSKEVPNRLYNILKTNPSLSRARSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVEETQVPLLLDLQVE 728 ++ +++FLLDALYC EE W+DE +V++ + + P +L +QDL W+D++L TL SKE L + + LS R EAV W+L+VNAHY F+ L A+LA+ YLD+F+ S+ LQRDKPWM QL +VACLSLAAKVEETQVPLLLD QVE Sbjct: 10 REEQSNSFLLDALYCEEEKWDDEGE----EVEENSSL------------------SSSSSPFVVL-QQDLFWEDEDLVTLFSKEEEQGLSCL--DDVYLSTDRKEAVGWILRVNAHYGFSTLAAVLAITYLDKFICSYSLQRDKPWMLQLVSVACLSLAAKVEETQVPLLLDFQVE 160 HSP 2 Score: 93.5893 bits (231), Expect = 1.694e-18 Identity = 48/95 (50.53%), Postives = 66/95 (69.47%), Query Frame = 2 Query: 638 DGPTSCRGLSLACCQSGG---DTSAPLIRPAS-GDTKFVFEAKTIQRMEILVLSTLQWKMNPVTPLSFLDYIARRLGLKGYLCWEFLXRCDRILL 910 D P + +S+AC +T PL+ +TK+VFEAKTIQRME+L+LSTL+WKM+ +TP+SF+D+I RRLGLK W+FL +C R+LL Sbjct: 127 DKPWMLQLVSVACLSLAAKVEETQVPLLLDFQVEETKYVFEAKTIQRMELLILSTLEWKMHLITPISFVDHIIRRLGLKNNAHWDFLNKCHRLLL 221
BLAST of CK934906 vs. ExPASy Swiss-Prot
Match: CCD21_ARATH (Cyclin-D2-1 OS=Arabidopsis thaliana GN=CYCD2-1 PE=1 SV=3) HSP 1 Score: 107.071 bits (266), Expect = 1.017e-34 Identity = 59/129 (45.74%), Postives = 82/129 (63.57%), Query Frame = 3 Query: 384 VPMLHEQDLSWQDDELSTLLSKEV---PNRLY--NILKTNPSLSRARSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVEETQVPLLLDLQVEIPNLYLRPK 755 +PM+ S +D + +L +E+ P Y +L + LS R++A+DW+LKV AHY F L L++NYLDRFL S++L +DK W AQL AV+CLSLA+K+EET VP ++DLQVE P K Sbjct: 52 IPMMGSSSSSLSEDRIKEMLVREIEFCPGTDYVKRLLSGDLDLS-VRNQALDWILKVCAHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASKMEETDVPHIVDLQVEDPKFVFEAK 179 HSP 2 Score: 61.6178 bits (148), Expect = 1.017e-34 Identity = 28/61 (45.90%), Postives = 42/61 (68.85%), Query Frame = 2 Query: 728 DTKFVFEAKTIQRMEILVLSTLQWKMNPVTPLSFLDYIARRLGLKGYLCWEFLXRCDRILL 910 D KFVFEAKTI+RME+LV++TL W++ +TP SF+DY + + G++ + R R +L Sbjct: 171 DPKFVFEAKTIKRMELLVVTTLNWRLQALTPFSFIDYFVDK--ISGHVSENLIYRSSRFIL 229
BLAST of CK934906 vs. ExPASy Swiss-Prot
Match: CCD41_ORYSJ (Cyclin-D4-1 OS=Oryza sativa subsp. japonica GN=CYCD4-1 PE=2 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 1.429e-33 Identity = 50/75 (66.67%), Postives = 58/75 (77.33%), Query Frame = 3 Query: 501 RARSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVEETQVPLLLDLQV 725 R R +A+DW+ KV+++YSF LTA LAVNYLDRFL +QL K WM QL AVACLSLAAK+EET VP LDLQV Sbjct: 101 RVRMDAIDWIWKVHSYYSFAPLTACLAVNYLDRFLSLYQLPDGKDWMTQLLAVACLSLAAKMEETDVPQSLDLQV 175 HSP 2 Score: 64.3142 bits (155), Expect = 1.429e-33 Identity = 28/43 (65.12%), Postives = 36/43 (83.72%), Query Frame = 2 Query: 725 GDTKFVFEAKTIQRMEILVLSTLQWKMNPVTPLSFLDYIARRL 853 G+ ++VFEAKTIQRME+LVLSTL+W+M VTP S++DY R L Sbjct: 176 GEERYVFEAKTIQRMELLVLSTLKWRMQAVTPFSYVDYFLREL 218
BLAST of CK934906 vs. ExPASy Swiss-Prot
Match: CCD42_ORYSJ (Cyclin-D4-2 OS=Oryza sativa subsp. japonica GN=CYCD4-2 PE=2 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 8.694e-30 Identity = 44/78 (56.41%), Postives = 59/78 (75.64%), Query Frame = 3 Query: 501 RARSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVEETQVPLLLDLQVEIP 734 R RSEA+ W+ +V +Y+F+++TA LAVNYLDRFL ++L + WM QL +VACLS+AAK+EET VP LDLQ+ P Sbjct: 108 RVRSEAIGWIWEVYTYYNFSSVTAYLAVNYLDRFLSQYELPEGRDWMTQLLSVACLSIAAKMEETVVPQCLDLQIGEP 185 HSP 2 Score: 58.151 bits (139), Expect = 8.694e-30 Identity = 26/62 (41.94%), Postives = 39/62 (62.90%), Query Frame = 2 Query: 725 GDTKFVFEAKTIQRMEILVLSTLQWKMNPVTPLSFLDYIARRLGLKGYLCWEFLXRCDRILL 910 G+ +F+FE +TI RME+LVL+ L W+M VTP S++DY R+L +L R ++L Sbjct: 183 GEPRFLFEVETIHRMELLVLTNLNWRMQAVTPFSYIDYFLRKLNSGNAAPRSWLLRSSELIL 244
BLAST of CK934906 vs. ExPASy Swiss-Prot
Match: CCD11_ARATH (Cyclin-D1-1 OS=Arabidopsis thaliana GN=CYCD1-1 PE=1 SV=3) HSP 1 Score: 92.8189 bits (229), Expect = 9.368e-29 Identity = 52/109 (47.71%), Postives = 68/109 (62.39%), Query Frame = 3 Query: 411 SWQDDELSTLLSKE---VPNRLY-NILKTNPSLSRARSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVEETQVPLLLDLQV 725 SW D ++ + E VP Y + +T + AR ++V W+LKV A+Y+F LTA LAVNY+DRFL++ +L W QL AVACLSLAAK+EE VP L D QV Sbjct: 46 SWPGDSIACFIEDERHFVPGHDYLSRFQTRSLDASAREDSVAWILKVQAYYNFQPLTAYLAVNYMDRFLYARRLPETSGWPMQLLAVACLSLAAKMEEILVPSLFDFQV 154 HSP 2 Score: 55.8398 bits (133), Expect = 9.368e-29 Identity = 25/59 (42.37%), Postives = 37/59 (62.71%), Query Frame = 2 Query: 734 KFVFEAKTIQRMEILVLSTLQWKMNPVTPLSFLDYIARRLGLKGYLCWEFLXRCDRILL 910 K++FEAKTI+RME+LVLS L W++ VTP F+ + A ++ G F+ I+L Sbjct: 158 KYLFEAKTIKRMELLVLSVLDWRLRSVTPFDFISFFAYKIDPSGTFLGFFISHATEIIL 216
BLAST of CK934906 vs. ExPASy Swiss-Prot
Match: CCD23_ORYSJ (Putative cyclin-D2-3 OS=Oryza sativa subsp. japonica GN=CYCD2-3 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.003e-27 Identity = 48/75 (64.00%), Postives = 53/75 (70.67%), Query Frame = 3 Query: 507 RSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFS--FQLQRDKPWMAQLAAVACLSLAAKVEETQVPLLLDLQV 725 R A+DW+ KV A+YSF L A LAVNYLDRFL S F + D PWM QL VACLSLAAK+EET P LDLQV Sbjct: 104 RIAAIDWICKVQAYYSFGPLCAYLAVNYLDRFLSSVEFSVTNDMPWMQQLLIVACLSLAAKMEETAAPGTLDLQV 178 HSP 2 Score: 55.0694 bits (131), Expect = 1.003e-27 Identity = 23/59 (38.98%), Postives = 40/59 (67.80%), Query Frame = 2 Query: 734 KFVFEAKTIQRMEILVLSTLQWKMNPVTPLSFLDYIARRLGLKGYLCWEFLXRCDRILL 910 ++VF+A+TI RMEI+VL+TL+W+M VTP +++ + ++ + E + RC I+L Sbjct: 182 EYVFDAETIHRMEIIVLTTLKWRMQAVTPFTYIGHFLDKINEGNRITSELISRCTEIIL 240
BLAST of CK934906 vs. ExPASy Swiss-Prot
Match: CCD22_ORYSJ (Cyclin-D2-2 OS=Oryza sativa subsp. japonica GN=CYCD2-2 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.759e-27 Identity = 44/73 (60.27%), Postives = 57/73 (78.08%), Query Frame = 3 Query: 507 RSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVEETQVPLLLDLQV 725 R +A+DW+ KV+++Y+F L+ LAVNYLDRFL SF L D+ WM QL +V+CLSLA K+EET VPL +DLQV Sbjct: 95 RKDAIDWICKVHSYYNFGPLSLYLAVNYLDRFLSSFNLPHDESWMQQLLSVSCLSLATKMEETVVPLPMDLQV 167 HSP 2 Score: 49.6766 bits (117), Expect = 3.759e-27 Identity = 19/37 (51.35%), Postives = 30/37 (81.08%), Query Frame = 2 Query: 728 DTKFVFEAKTIQRMEILVLSTLQWKMNPVTPLSFLDY 838 D ++VFEA+ I+RME++V+ TL+W++ VTP SF+ Y Sbjct: 169 DAEYVFEARHIKRMELIVMKTLKWRLQAVTPFSFIGY 205
BLAST of CK934906 vs. ExPASy Swiss-Prot
Match: CCD21_ORYSJ (Cyclin-D2-1 OS=Oryza sativa subsp. japonica GN=CYCD2-1 PE=3 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 8.919e-26 Identity = 48/84 (57.14%), Postives = 56/84 (66.67%), Query Frame = 3 Query: 504 ARSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVEETQVPLLLDLQVEIPNLYLRPK 755 AR+E+V W+LKV + F LTA LAVNY+DRFL L + W QL AVACLSLAAK+EET VP LLDLQVE P+ Sbjct: 81 ARAESVSWILKVQEYNGFLPLTAYLAVNYMDRFLSLRHLPEGQGWAMQLLAVACLSLAAKMEETLVPSLLDLQVECSRYVFEPR 164 HSP 2 Score: 47.3654 bits (111), Expect = 8.919e-26 Identity = 18/38 (47.37%), Postives = 29/38 (76.32%), Query Frame = 2 Query: 731 TKFVFEAKTIQRMEILVLSTLQWKMNPVTPLSFLDYIA 844 +++VFE +TI RME L+L+ L W++ VTP +F+D+ A Sbjct: 157 SRYVFEPRTICRMEFLILTALNWRLRSVTPFTFIDFFA 194 The following BLAST results are available for this feature:
BLAST of CK934906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934906 ID=CK934906; Name=CK934906; organism=Citrus sinensis; type=EST; length=911bpback to top |