CK934913

Overview
NameCK934913
Unique NameCK934913
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length434
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2610 contig Csv1_Contig2610:443..876. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934913 vs. ExPASy Swiss-Prot
Match: CCD25_BOVIN (Coiled-coil domain-containing protein 25 OS=Bos taurus GN=CCDC25 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 1.756e-53
Identity = 97/130 (74.62%), Postives = 114/130 (87.69%), Query Frame = 1
Query:    7 YTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTIDDISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVKVEKRINEIVNRLNKTKVERKTDL 396
            YTI+MG DKYENE+LIKYG+PEDIWFHVDK+SSAHVYLRLHKG+ I+DI + VL DCA LVKANSIQG K+NN++VVYTPW+NLKKTA MDVGQ+GFH  K V+ V VEK++NEI+NRL KTK+ER  DL
Sbjct:   15 YTIYMGKDKYENEDLIKYGWPEDIWFHVDKLSSAHVYLRLHKGEKIEDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIVTVEKKVNEILNRLEKTKMERFPDL 144          
BLAST of CK934913 vs. ExPASy Swiss-Prot
Match: CCD25_PONAB (Coiled-coil domain-containing protein 25 OS=Pongo abelii GN=CCDC25 PE=2 SV=2)

HSP 1 Score: 207.223 bits (526), Expect = 2.294e-53
Identity = 97/130 (74.62%), Postives = 114/130 (87.69%), Query Frame = 1
Query:    7 YTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTIDDISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVKVEKRINEIVNRLNKTKVERKTDL 396
            YTI+MG DKYENE+LIK+G+PEDIWFHVDK+SSAHVYLRLHKG+ I+DI + VL DCA LVKANSIQG K+NN++VVYTPW+NLKKTA MDVGQ+GFH  K V+ V VEK++NEI+NRL KTKVER  DL
Sbjct:   15 YTIYMGKDKYENEDLIKHGWPEDIWFHVDKLSSAHVYLRLHKGENIEDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIVTVEKKVNEILNRLEKTKVERFPDL 144          
BLAST of CK934913 vs. ExPASy Swiss-Prot
Match: CCD25_HUMAN (Coiled-coil domain-containing protein 25 OS=Homo sapiens GN=CCDC25 PE=1 SV=2)

HSP 1 Score: 207.223 bits (526), Expect = 2.294e-53
Identity = 97/130 (74.62%), Postives = 114/130 (87.69%), Query Frame = 1
Query:    7 YTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTIDDISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVKVEKRINEIVNRLNKTKVERKTDL 396
            YTI+MG DKYENE+LIK+G+PEDIWFHVDK+SSAHVYLRLHKG+ I+DI + VL DCA LVKANSIQG K+NN++VVYTPW+NLKKTA MDVGQ+GFH  K V+ V VEK++NEI+NRL KTKVER  DL
Sbjct:   15 YTIYMGKDKYENEDLIKHGWPEDIWFHVDKLSSAHVYLRLHKGENIEDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIVTVEKKVNEILNRLEKTKVERFPDL 144          
BLAST of CK934913 vs. ExPASy Swiss-Prot
Match: CCD25_MOUSE (Coiled-coil domain-containing protein 25 OS=Mus musculus GN=Ccdc25 PE=1 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 3.313e-52
Identity = 95/130 (73.08%), Postives = 113/130 (86.92%), Query Frame = 1
Query:    7 YTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTIDDISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVKVEKRINEIVNRLNKTKVERKTDL 396
            YTI+MG DKYENE+LIKYG+PEDIWFHVDK+SSAHVYLRL KG+ I+DI + VL DCA LVKANSIQG K+NN++VVYTPW+NLKKTA MDVGQ+GFH  K V+ V VEK++NEI+NRL KTK+E+  DL
Sbjct:   15 YTIYMGKDKYENEDLIKYGWPEDIWFHVDKLSSAHVYLRLQKGEKIEDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIVTVEKKVNEILNRLEKTKLEKFPDL 144          
BLAST of CK934913 vs. ExPASy Swiss-Prot
Match: CCD25_DANRE (Coiled-coil domain-containing protein 25 OS=Danio rerio GN=ccdc25 PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 7.380e-52
Identity = 96/130 (73.85%), Postives = 111/130 (85.38%), Query Frame = 1
Query:    7 YTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTIDDISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVKVEKRINEIVNRLNKTKVERKTDL 396
            +TI+MG DKYENE+LIKYG+PEDIWFHVDK+SSAHVYLR+ KG TIDDI + VL DC QLVK NSIQG K+NNI++VYTPW+NLKKTA MD+GQ+GFH  K V+ V VEK+INEIVNRL KTK ER  DL
Sbjct:   14 HTIYMGKDKYENEDLIKYGWPEDIWFHVDKLSSAHVYLRMPKGTTIDDIPKEVLIDCVQLVKNNSIQGCKMNNINIVYTPWSNLKKTADMDIGQIGFHRQKEVKIVAVEKKINEIVNRLEKTKEERYPDL 143          
BLAST of CK934913 vs. ExPASy Swiss-Prot
Match: CCD25_XENTR (Coiled-coil domain-containing protein 25 OS=Xenopus tropicalis GN=ccdc25 PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 8.159e-51
Identity = 97/130 (74.62%), Postives = 113/130 (86.92%), Query Frame = 1
Query:    7 YTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTIDDISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVKVEKRINEIVNRLNKTKVERKTDL 396
            YT++MG DKYENE+LIKYG+PEDIWFHVDK+SSAHVYLRL K QTI+DI + VL DCAQLVKANSIQG K+NNI+VVYTPWANLKKTA MD+GQ+GFH  K V+T+ VEK +++IVNRL KTK ER  DL
Sbjct:   14 YTMYMGKDKYENEDLIKYGWPEDIWFHVDKLSSAHVYLRLQKDQTIEDIPKEVLLDCAQLVKANSIQGCKMNNINVVYTPWANLKKTADMDIGQIGFHRQKDVKTMTVEK-VSKIVNRLEKTKDERFPDL 142          
BLAST of CK934913 vs. ExPASy Swiss-Prot
Match: CCD25_DICDI (Coiled-coil domain-containing protein 25 homolog OS=Dictyostelium discoideum GN=ccdc25 PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 1.068e-42
Identity = 76/131 (58.02%), Postives = 106/131 (80.92%), Query Frame = 1
Query:    4 DYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTIDDISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVKVEKRINEIVNRLNKTKVERKTDL 396
            +Y  +MG+DK+ENE+LIKYG+PED+WFHV+ +SSAHVYLRL KG+T +DI   +LE+C QLVK NSIQG K  ++D+VYTPWANLKKTA M+ GQV +HN + V+ V+  ++ ++I+NR+ KT+ +R+ DL
Sbjct:   11 EYICYMGIDKFENEDLIKYGWPEDVWFHVNDLSSAHVYLRLRKGETWNDIPANILEECCQLVKQNSIQGCKEASVDIVYTPWANLKKTAGMEAGQVLYHNEREVKYVRNVRKDSKIINRIEKTREKREVDL 141          
BLAST of CK934913 vs. ExPASy Swiss-Prot
Match: JLP2_YEAST (Protein JLP2 OS=Saccharomyces cerevisiae GN=JLP2 PE=1 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 3.688e-27
Identity = 62/128 (48.44%), Postives = 85/128 (66.41%), Query Frame = 1
Query:    7 YTIFMGLDKYENEELIKYGFPE--DIWFHVDKMSSAHVYLRLHKGQ-TIDDISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVKVEKRINEIVNRLNKTKVE 381
            Y I MG DK+EN+ LIK+ + E   +WFH DK SS HVYL+L   + TIDDI + V+ DC QL K+ SIQGNK+    ++ TPW NL+K   M+ G+V F + +  R ++   R N+I+NRL KT+VE
Sbjct:   16 YQIVMGKDKFENDLLIKWSYRELNYVWFHADKYSSGHVYLKLRPNEKTIDDIPQEVICDCLQLCKSESIQGNKMPQCTILITPWHNLRKNRYMNPGEVSFKSLRQCRKMECGARDNKILNRLAKTRVE 143          
The following BLAST results are available for this feature:
BLAST of CK934913 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
CCD25_BOVIN1.756e-5374.62Coiled-coil domain-containing protein 25 OS=Bos ta... [more]
CCD25_PONAB2.294e-5374.62Coiled-coil domain-containing protein 25 OS=Pongo ... [more]
CCD25_HUMAN2.294e-5374.62Coiled-coil domain-containing protein 25 OS=Homo s... [more]
CCD25_MOUSE3.313e-5273.08Coiled-coil domain-containing protein 25 OS=Mus mu... [more]
CCD25_DANRE7.380e-5273.85Coiled-coil domain-containing protein 25 OS=Danio ... [more]
CCD25_XENTR8.159e-5174.62Coiled-coil domain-containing protein 25 OS=Xenopu... [more]
CCD25_DICDI1.068e-4258.02Coiled-coil domain-containing protein 25 homolog O... [more]
JLP2_YEAST3.688e-2748.44Protein JLP2 OS=Saccharomyces cerevisiae GN=JLP2 P... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004225_C03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IVF_C03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934913 ID=CK934913; Name=CK934913; organism=Citrus sinensis; type=EST; length=434bp
GGGGATTACACAATTTTCATGGGTCTCGACAAGTACGAGAACGAGGAACT
GATCAAATACGGCTTCCCCGAAGACATTTGGTTTCATGTGGATAAAATGT
CTTCTGCTCATGTGTATTTGAGATTACACAAAGGCCAAACTATTGATGAT
ATTAGTGAAGGCGTATTGGAAGATTGTGCTCAGCTTGTCAAAGCTAATTC
CATTCAAGGCAATAAGGTGAATAACATTGATGTTGTTTATACACCTTGGG
CCAATTTGAAGAAAACTGCTTCCATGGATGTTGGCCAAGTTGGTTTCCAC
AATCCAAAGATGGTTCGGACAGTGAAAGTGGAGAAAAGAATAAATGAGAT
AGTTAATAGATTGAACAAAACAAAAGTGGAGAGGAAAACTGATTTGAAAG
CGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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