CK934944

Overview
NameCK934944
Unique NameCK934944
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1745 contig Csv1_Contig1745:1..873. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934944 vs. ExPASy Swiss-Prot
Match: ITPA_DICDI (Probable inosine triphosphate pyrophosphatase OS=Dictyostelium discoideum GN=itpa PE=3 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.846e-67
Identity = 123/186 (66.13%), Postives = 143/186 (76.88%), Query Frame = 1
Query:   67 LSRPVTFVTGNAKKLEEVKAILGQSIPFQSLKLDLPELQGEPEDISKEKARLAAIQVNGPVLVEDTCLCFNALKGLPGPYIKWFLQKIGHEGLNNLLMAYEDKSAYALCGFAFALGPNIEPITFLGKTPGKIVPARGPNDFGWDPIFQPDGYDQTYAEMAKEEKNKISHRSKALAMVKSHFAEAGY 624
            +S+ + FVTGNAKKLEE   ILG S P +S K+DLPELQG+P DIS EK ++AA +V GPVLVEDTCLCFNALKGLPGPY+KWFL K+  EGL  LL A+EDKSAYALC FAF+ GP+ EPI F GKT G IV  RGP +FGWDP+FQPDGY +TYAEM K  KN ISHR+++L  VK      GY
Sbjct:    3 ISKKIVFVTGNAKKLEEALQILGTSFPIESKKVDLPELQGDPIDISIEKCKIAAREVGGPVLVEDTCLCFNALKGLPGPYVKWFLDKLEPEGLYKLLDAWEDKSAYALCNFAFSEGPDSEPIVFAGKTDGIIVQPRGPRNFGWDPVFQPDGYKETYAEMDKSIKNTISHRTRSLQKVKEFLKSKGY 188          
BLAST of CK934944 vs. ExPASy Swiss-Prot
Match: ITPA_MOUSE (Inosine triphosphate pyrophosphatase OS=Mus musculus GN=Itpa PE=2 SV=2)

HSP 1 Score: 234.958 bits (598), Expect = 4.405e-61
Identity = 117/188 (62.23%), Postives = 142/188 (75.53%), Query Frame = 1
Query:   64 VLSRPVTFVTGNAKKLEEVKAILGQSIP--FQSLKLDLPELQGEPEDISKEKARLAAIQVNGPVLVEDTCLCFNALKGLPGPYIKWFLQKIGHEGLNNLLMAYEDKSAYALCGFAFALGPNIEPI-TFLGKTPGKIVPARGPNDFGWDPIFQPDGYDQTYAEMAKEEKNKISHRSKALAMVKSHFAEA 618
            ++ + + FVTGNAKKLEEV  ILG + P   ++ K+DLPE QGEP++IS +K R AA QV GPVLVEDTCLCFNAL GLPGPYIKWFLQK+  EGL+ LL  +EDKSAYALC FA + G   +P+  F G+T G+IV  RG  DFGWDP FQPDGY+QTYAEM K EKN ISHR +AL  ++ +F+ A
Sbjct:    5 LVGKKIVFVTGNAKKLEEVIQILGDNFPCTLEAQKIDLPEYQGEPDEISIQKCREAARQVQGPVLVEDTCLCFNALGGLPGPYIKWFLQKLKPEGLHQLLAGFEDKSAYALCTFALSTGDPSQPVLLFRGQTSGQIVMPRGSRDFGWDPCFQPDGYEQTYAEMPKSEKNTISHRFRALHKLQEYFSVA 192          
BLAST of CK934944 vs. ExPASy Swiss-Prot
Match: ITPA_BOVIN (Inosine triphosphate pyrophosphatase OS=Bos taurus GN=ITPA PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.417e-59
Identity = 115/183 (62.84%), Postives = 137/183 (74.86%), Query Frame = 1
Query:   73 RPVTFVTGNAKKLEEVKAILGQSIP--FQSLKLDLPELQGEPEDISKEKARLAAIQVNGPVLVEDTCLCFNALKGLPGPYIKWFLQKIGHEGLNNLLMAYEDKSAYALCGFAFALGPNIEPI-TFLGKTPGKIVPARGPNDFGWDPIFQPDGYDQTYAEMAKEEKNKISHRSKALAMVKSHFA 612
            + + FVTGNAKKLEEV  ILG   P    + K+DLPE QGEP++IS  K + AA QV GPVLVEDTCLCFNAL GLPGPYIKWFL+K+  EGL+ LL  ++DKSAYALC FAF+ G   EP+  F G+T G+IV  RG  DFGWDP FQPDGY+QTYAEM K EKN ISHR +AL  ++ +F+
Sbjct:    8 KKIVFVTGNAKKLEEVIQILGDKFPCTLVAQKIDLPEYQGEPDEISIRKCQEAARQVQGPVLVEDTCLCFNALGGLPGPYIKWFLEKLKPEGLHQLLEGFQDKSAYALCTFAFSTGDPNEPVRLFRGRTMGRIVVPRGCRDFGWDPCFQPDGYEQTYAEMPKAEKNTISHRFRALLALQEYFS 190          
BLAST of CK934944 vs. ExPASy Swiss-Prot
Match: ITPA_HUMAN (Inosine triphosphate pyrophosphatase OS=Homo sapiens GN=ITPA PE=1 SV=2)

HSP 1 Score: 227.639 bits (579), Expect = 7.032e-59
Identity = 112/185 (60.54%), Postives = 137/185 (74.05%), Query Frame = 1
Query:   64 VLSRPVTFVTGNAKKLEEVKAILGQSIP--FQSLKLDLPELQGEPEDISKEKARLAAIQVNGPVLVEDTCLCFNALKGLPGPYIKWFLQKIGHEGLNNLLMAYEDKSAYALCGFAFALGPNIEPI-TFLGKTPGKIVPARGPNDFGWDPIFQPDGYDQTYAEMAKEEKNKISHRSKALAMVKSHF 609
            ++ + + FVTGNAKKLEEV  ILG   P    + K+DLPE QGEP++IS +K + A  QV GPVLVEDTCLCFNAL GLPGPYIKWFL+K+  EGL+ LL  +EDKSAYALC FA + G   +P+  F G+T G+IV  RG  DFGWDP FQPDGY+QTYAEM K EKN +SHR +AL  ++ +F
Sbjct:    5 LVGKKIVFVTGNAKKLEEVVQILGDKFPCTLVAQKIDLPEYQGEPDEISIQKCQEAVRQVQGPVLVEDTCLCFNALGGLPGPYIKWFLEKLKPEGLHQLLAGFEDKSAYALCTFALSTGDPSQPVRLFRGRTSGRIVAPRGCQDFGWDPCFQPDGYEQTYAEMPKAEKNAVSHRFRALLELQEYF 189          
BLAST of CK934944 vs. ExPASy Swiss-Prot
Match: HAM1_SCHPO (Protein ham1 OS=Schizosaccharomyces pombe GN=SPCC830.10 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.612e-41
Identity = 86/180 (47.78%), Postives = 112/180 (62.22%), Query Frame = 1
Query:   79 VTFVTGNAKKLEEVKAILGQSIPFQSLKLDLPELQGEPEDISKEKARLAAIQVNGPVLVEDTCLCFNALKGLPGPYIKWFLQKIGHEGLNNLLMAYEDKSAYALCGFAFALGPNIEPITFLGKTPGKIVPARGPNDFGWDPIFQPDGYDQTYAEMAKEEKNKISHRSKALAMVKSHFAEA 618
            + FVTGN  KL +VK ILG     ++   DLPE+QG  +++  EK + AA  V GPVLVEDT L + A+ GLPGPY+KWFL  +G +GL  ++ A++ K A A C F +  GP      F G   G++VP RG N FGW+ IFQP+G+  TYAEM  EE+N  SHR  A AM    F E+
Sbjct:    7 ILFVTGNKHKLADVKNILGDRFEIKNHDYDLPEIQGSVKEVVLEKCKAAAEIVKGPVLVEDTWLGYKAMNGLPGPYVKWFLNSVGPDGLYRMVSAFDTKEAQAGCTFGYTKGPGKPIHLFEGILDGQVVPPRGSNGFGWNSIFQPNGHKHTYAEMTDEERNSCSHRYLA-AMKLRDFLES 185          
BLAST of CK934944 vs. ExPASy Swiss-Prot
Match: HAM1_YEAST (Protein HAM1 OS=Saccharomyces cerevisiae GN=HAM1 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.278e-33
Identity = 86/187 (45.99%), Postives = 112/187 (59.89%), Query Frame = 1
Query:   79 VTFVTGNAKKLEEVKAILGQSIPFQSLK-------LDLPELQGEPED---ISKEKARLAAIQVNGPVLVEDTCLCFNALKGLPGPYIKWFLQKIGHEGLNNLLMAYEDKSAYALCGFAFALGPNIEPITFLGKTPGKIVPARGPNDFGWDPIFQP-DGYDQTYAEMAKEEKNKISHRSKALAMVKSH 606
            + FVTGNA KL+EV++IL Q +   +         LDL ELQ    +   ++K K  +AA+    PV VEDT L F+   GLPG YIKWFL+ +G E +  +L  +E+K+A A+    FA     E   F G T GKIVP+RGP  FGWD IF+P D +  TYAEM+K+ KN ISHR KA A  K +
Sbjct:    6 IVFVTGNANKLKEVQSILTQEVDNNNKTIHLINEALDLEELQDTDLNAIALAKGKQAVAALGKGKPVFVEDTALRFDEFNGLPGAYIKWFLKSMGLEKIVKMLEPFENKNAEAVTTICFA-DSRGEYHFFQGITRGKIVPSRGPTTFGWDSIFEPFDSHGLTYAEMSKDAKNAISHRGKAFAQFKEY 191          
BLAST of CK934944 vs. ExPASy Swiss-Prot
Match: NTPA_METKA (Nucleoside-triphosphatase OS=Methanopyrus kandleri GN=MK1594 PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.384e-28
Identity = 75/173 (43.35%), Postives = 99/173 (57.23%), Query Frame = 1
Query:   79 VTFVTGNAKKLEEVKAILGQ-SIPFQSLKLDLPELQGEP-EDISKEKARLAAIQVNGPVLVEDTCLCFNALKGLPGPYIKWFLQKIGHEGLNNLLMAYEDKSAYALCGFAFALGPNIEPITFLGKTPGKIVPA-RGPNDFGWDPIFQPDGYDQTYAEMAKEEKNKISHRSKAL 588
            V F TGN  K  E K IL +  I  + + LD PELQ +  E+I+   AR  A  +  PV+VED+ L   AL G PGPY  +    IG+EG+  LL   E++ A  +    +   P   P+TF G+  G+I    RG   FG+DPIF P+G D T+AE+  EEK KISHR+KAL
Sbjct:    3 VLFATGNIGKYHEAKQILARYGIEVERVDLDYPELQSDSLEEIAAYGARYCAESLGQPVIVEDSGLFIEALNGFPGPYSAYVFDTIGNEGILKLLEGEENRKAEFISVVGYC-EPGGRPVTFTGEIRGRIAEEPRGEEGFGYDPIFIPEGEDSTFAELGVEEKCKISHRTKAL 174          
BLAST of CK934944 vs. ExPASy Swiss-Prot
Match: NTPA_PYRKO (Nucleoside-triphosphatase OS=Pyrococcus kodakaraensis GN=TK2111 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.524e-24
Identity = 66/173 (38.15%), Postives = 101/173 (58.38%), Query Frame = 1
Query:   79 VTFVTGNAKKLEEVKAILGQ-SIPFQSLKLDLPELQGEP-EDISKEKARLAAIQVNGPVLVEDTCLCFNALKGLPGPYIKWFLQKIGHEGLNNLLMAYEDKSAYALCGFAFALGPNIEPITFLGKTPGKIVPA-RGPNDFGWDPIFQPDGYDQTYAEMAKEEKNKISHRSKAL 588
            + FVT N  K+EE +       +    LK+  PE+Q +  E++++  A+  A +V+GP  ++D+ L   ALKG PG Y  +  + IG++G+  LL   +++ A+     A+  G   E   F G+  GKI    RG   FG+DPIF P+G+D+T+AEM  EEKN+ISHR +AL
Sbjct:    3 LAFVTSNPGKVEEARKYFEPLGVEVYQLKVSYPEIQADTLEEVAEYGAKWLAQRVDGPFFLDDSGLFVEALKGFPGVYSAYVYKTIGYQGILKLLQGEKNRKAHFKSVIAYWDG---ELHIFTGRVDGKIATEPRGSGGFGFDPIFIPEGFDRTFAEMTTEEKNRISHRGRAL 172          
BLAST of CK934944 vs. ExPASy Swiss-Prot
Match: NTPA_IGNH4 (Nucleoside-triphosphatase OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=Igni_0179 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.761e-23
Identity = 70/190 (36.84%), Postives = 107/190 (56.32%), Query Frame = 1
Query:   64 VLSRPVTFVTGNAKKLEEVKAILGQ-SIPFQSLKLDLPELQGEPEDISKEKARLAAIQVNG-----PVLVEDTCLCFNALKGLPGPYIKWFLQKIGHEGLNNLLMAYEDKSAYALCGFAFALGPNIEPITFLGKTPGKIV-PARGPNDFGWDPIFQPDGYDQTYAEMAKEEKNKISHRSKALAMVKSHFA 612
            ++S+ V F+T N  K +EV  +L Q SI    LK +  E+Q    D  +E AR AA +        P+L+ED+ L  +ALKG PGPY  +  + +G EGL  L+   ED+ A  +C  A     + + +  +G+  G+I    RG   FG+DPIF P GY++T+AE+ +E K +ISHR++A   +  H +
Sbjct:    1 MVSKKVYFLTSNPHKAKEVSDVLSQFSIEVVPLKGEKLEIQA---DSVEEVARFAAEEAKKRFKERPLLLEDSGLFVDALKGFPGPYSNYVYRTLGLEGLLKLMEGVEDRRARFVCAAALVKEDD-KIVIEVGEVEGEIAYEPRGDKGFGFDPIFVPLGYEKTFAELGEEVKKRISHRARAFMKIAKHLS 186          
BLAST of CK934944 vs. ExPASy Swiss-Prot
Match: NTPA_METMA (Nucleoside-triphosphatase OS=Methanosarcina mazei GN=MM_0603 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.121e-23
Identity = 71/176 (40.34%), Postives = 99/176 (56.25%), Query Frame = 1
Query:   79 VTFVTGNAKKLEEVKAILGQ-SIPFQSLKLDLPELQ-GEPEDISKEKARLAAIQVNGPVLVEDTCLCFNALKGLPGPYIKWFLQKIGHEGLNNLLMAYEDKSAYALCGFAFALG---PNIEPITFLGKTPGKIV-PARGPNDFGWDPIFQPDGYDQTYAEMAKEEKNKISHRSKAL 588
            + FVTGN  K  EV+ IL    I     K   PELQ  E E I+   A+  A ++N PV+V+D+ +  NAL G PGPY ++   K+G+  +  L+   +D+SAY    F   +G   P  EP+ F G   GKI    RG   FG+DPIF+ +G   T+ E+  EEKNK+SHR +A+
Sbjct:    4 IVFVTGNKGKFAEVRDILKNFGIEAIQNKDGYPELQEDELEPIAANGAQYVANKLNMPVMVDDSGIFINALNGFPGPYSRFVEDKLGNPKVLKLMEGEKDRSAY----FKTVIGYCEPGQEPLVFPGVVEGKIAYEERGTGGFGYDPIFEYNG--MTFGELGDEEKNKVSHRRRAV 173          
The following BLAST results are available for this feature:
BLAST of CK934944 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
ITPA_DICDI1.846e-6766.13Probable inosine triphosphate pyrophosphatase OS=D... [more]
ITPA_MOUSE4.405e-6162.23Inosine triphosphate pyrophosphatase OS=Mus muscul... [more]
ITPA_BOVIN2.417e-5962.84Inosine triphosphate pyrophosphatase OS=Bos taurus... [more]
ITPA_HUMAN7.032e-5960.54Inosine triphosphate pyrophosphatase OS=Homo sapie... [more]
HAM1_SCHPO6.612e-4147.78Protein ham1 OS=Schizosaccharomyces pombe GN=SPCC8... [more]
HAM1_YEAST2.278e-3345.99Protein HAM1 OS=Saccharomyces cerevisiae GN=HAM1 P... [more]
NTPA_METKA8.384e-2843.35Nucleoside-triphosphatase OS=Methanopyrus kandleri... [more]
NTPA_PYRKO2.524e-2438.15Nucleoside-triphosphatase OS=Pyrococcus kodakaraen... [more]
NTPA_IGNH44.761e-2336.84Nucleoside-triphosphatase OS=Ignicoccus hospitalis... [more]
NTPA_METMA8.121e-2340.34Nucleoside-triphosphatase OS=Methanosarcina mazei ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004224_H12 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIIF_H12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934944 ID=CK934944; Name=CK934944; organism=Citrus sinensis; type=EST; length=873bp
GGGGACCCTTGGAACGTTTCAAAAGAAAGCAAAATGGCAGCGGTGGCAAG
AGGACAGGGGTTTGTACTGTCGCGGCCGGTGACGTTCGTAACGGGGAACG
CCAAGAAATTGGAAGAAGTGAAAGCCATATTGGGGCAATCCATTCCCTTT
CAGTCTCTCAAGCTGGACCTGCCGGAATTGCAAGGGGAACCTGAAGATAT
CTCCAAAGAGAAGGCTCGTTTGGCTGCCATTCAAGTTAACGGCCCTGTGC
TCGTTGAAGATACTTGTCTCTGCTTCAATGCCTTGAAGGGTCTTCCTGGC
CCTTACATCAAGTGGTTCCTGCAGAAGATTGGTCATGAAGGTCTGAACAA
TTTGTTGATGGCATATGAGGATAAATCTGCTTATGCGTTGTGTGGATTTG
CTTTTGCTCTTGGGCCCAACATTGAGCCCATTACTTTCTTAGGGAAAACT
CCGGGTAAGATAGTTCCTGCTAGGGGTCCCAATGATTTTGGATGGGATCC
AATCTTTCAACCCGATGGTTATGACCAAACTTATGCGGAGATGGCAAAGG
AAGAAAAGAACAAAATTTCTCATCGTTCCAAGGCTCTTGCTATGGTGAAA
TCCCACTTTGCTGAAGCTGGATATACTTTTCAGATGGACACATCCACATG
AATGAACTGTATAGGTCAGACAGTCAAATGCTTTATCTCTATTTGTGTCT
TCTGGTGGAAGGGATAAAGCAAAGCCTGCAGATTATTTATCCATCCTGGC
TTGCGTAGGACAATCCATGGGTAACTTTTTCCTACATATGTGATTGTCTA
GTGAAACAAATGAGCTTGCAATTTTCGGTTAATTTGTTCNTGCGGTGAAA
CTTTACGTCAGTCATCATTTNNN
back to top