CK934948

Overview
NameCK934948
Unique NameCK934948
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length826
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7653 contig Csv1_Contig7653:3..828. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934948 vs. ExPASy Swiss-Prot
Match: LEC_ERYCO (Lectin OS=Erythrina corallodendron PE=1 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 3.472e-12
Identity = 78/281 (27.76%), Postives = 119/281 (42.35%), Query Frame = 2
Query:   20 LAEQKMIFLLLLSVFLRGASSSILSEDTPISFAFPSFAKDSCDNKTLICYGAIESSGALSITPGPPPNLPI-KKVGRVLYGKPLSLQRSFIDTTITIK----ISRHQNYT-DRAGDGMTFIFASDKNGPSAKGVGEYLGL--QSSPGDKFPPLAVELDTCLNKNLXXXXXXXXXXXXXXXESNPVNSLLD--VDLKSGRAIQVRIYYNPDFGQLSVYAAYSGETLVKVVEKPINLSDIIPTPVYVGLTAATG---DFLESHEVINWTFNSFPVPPSLKETN 823
            +A  K+  +L LS+ L     + ++    ISF+F  F   + DN TL     I  SG L +T      +P     GR LY KP+ +      T  + +     S  Q YT     DG+ F     K+ P A+G G YLG+   S   + +  L VE DT  N                  + N + S+      L +G+   V I Y+     L     Y     +  + + +++  ++P  V VGL+ ATG   D  E+H+V +W+F +     SL ETN
Sbjct:    1 MATYKLCSVLALSLTLFLLILNKVNSVETISFSFSEFEPGN-DNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYAKPVHIWDMTTGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKP-AQGYG-YLGIFNNSKQDNSYQTLGVEFDTFSNP------WDPPQVPHIGIDVNSIRSIKTQPFQLDNGQVANVVIKYDASSKILHAVLVYPSSGAIYTIAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSWSFQA-----SLPETN 267          
BLAST of CK934948 vs. ExPASy Swiss-Prot
Match: LEC2_CLALU (Agglutinin-2 OS=Cladrastis lutea PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.472e-12
Identity = 78/270 (28.89%), Postives = 116/270 (42.96%), Query Frame = 2
Query:   35 MIFLLLLSVFLRGASSSILSEDTPISFAFPSFAKDSCDNKTLICYG--AIESSG-ALSITPGPPPNLPIK-KVGRVLYGKPLSLQRSFID------TTITIKISRHQNYTDRAGDGMTFIFASDKNGPSAKGVGEYLGLQSSPGDKFPPL----AVELDTCLNKNLXXXXXXXXXXXXXXXESNPVNSLLDV--DLKSGRAIQVRIYYNPDFGQLSVYAAYSGETLVK--VVEKPINLSDIIPTPVYVGLTAATGDFLESHEVINWTFNS 790
            + F+ L  + L   +SS       +SF F +F  D  D   LI  G   I S G +L +T       P++  VGR LY  PL L  S  +      TT T  +S   + T+  GDG+ F  A  +        G  LGL S        L    AVE DT +N N                + N + S   V    ++G     +I YN D  +LSV ++Y      +   V   ++L   +P  V VG + +TG ++++H +++WTFNS
Sbjct:   20 LAFITLFLMLLNRVNSS-----DSLSFTFDNFRPDQRD---LILQGDAKISSGGDSLQLTKTDTSGKPVRGSVGRALYYTPLHLWDSSTNRLASFQTTFTFVLS---SPTNNPGDGIAFFIAPPETTIPPGSSGGLLGLFSPDNALNNSLNQIVAVEFDTFVNNN------WDPSHRHIGIDVNTIKSSATVRWQRENGSLATAQISYNSDTKKLSVVSSYPNTQANEDYTVSYDVDLKTELPEWVRVGFSGSTGGYVQNHNILSWTFNS 272          
BLAST of CK934948 vs. ExPASy Swiss-Prot
Match: LEC_ERYCG (Lectin OS=Erythrina crista-galli PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.010e-11
Identity = 70/241 (29.05%), Postives = 104/241 (43.15%), Query Frame = 2
Query:  107 ISFAFPSFAKDSCDNKTLICYGAIESSGALSITPGPPPNLPI-KKVGRVLYGKPLSLQRSFIDTTITIK----ISRHQNYT-DRAGDGMTFIFASDKNGPSAKGVGEYLGL--QSSPGDKFPPLAVELDTCLNKNLXXXXXXXXXXXXXXXESNPVNSLLD--VDLKSGRAIQVRIYYNPDFGQLSVYAAYSGETLVKVVEKPINLSDIIPTPVYVGLTAATG---DFLESHEVINWTFNS 790
            ISF+F  F   + DN TL     I  SG L +T      +P     GR LY KP+ +  S   T  + +     S  Q YT     DG+ F     K+ P A+G G YLG+   S   + +  LAVE DT  N                  + N + S+      L +G+   V I Y+     L V   Y     +  + + +++  ++P  V VGL+ ATG   D  E+H+V +W+F +
Sbjct:    4 ISFSFSEFEPGN-DNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHMWDSTTGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKP-AQGYG-YLGVFNNSKQDNSYQTLAVEFDTFSNP------WDPPQVPHIGIDVNSIRSIKTQPFQLDNGQVANVVIKYDAPSKILHVVLVYPSSGAIYTIAEIVDVKQVLPDWVDVGLSGATGAQRDAAETHDVYSWSFQA 235          
The following BLAST results are available for this feature:
BLAST of CK934948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
LEC_ERYCO3.472e-1227.76Lectin OS=Erythrina corallodendron PE=1 SV=3[more]
LEC2_CLALU3.472e-1228.89Agglutinin-2 OS=Cladrastis lutea PE=1 SV=1[more]
LEC_ERYCG1.010e-1129.05Lectin OS=Erythrina crista-galli PE=1 SV=1[more]
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Properties
Property NameValue
Genbank descriptionCGF1004224_G08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIIF_G08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934948 ID=CK934948; Name=CK934948; organism=Citrus sinensis; type=EST; length=826bp
GGGGATTCAATAAGTAGCCCTCGCAGAACAAAAAATGATTTTCCTACTAC
TCCTCTCCGTTTTTCTTCGCGGAGCTTCTTCATCAATCCTTTCCGAAGAC
ACACCTATTAGCTTCGCATTTCCCTCATTCGCCAAAGACAGTTGTGACAA
TAAGACCCTCATTTGCTACGGAGCGATTGAAAGTTCCGGCGCCTTAAGCA
TCACACCAGGCCCTCCACCAAACCTGCCGATCAAAAAGGTTGGACGGGTT
TTATACGGCAAGCCTCTGAGTTTACAGCGATCTTTTATTGATACCACCAT
CACCATTAAGATCTCACGCCATCAGAATTACACTGATCGTGCCGGAGATG
GCATGACGTTCATTTTTGCAAGCGATAAAAACGGTCCATCAGCAAAGGGC
GTCGGCGAATATCTTGGACTGCAGTCTTCACCAGGCGATAAATTTCCTCC
ATTAGCCGTGGAGCTGGACACATGCCTGAACAAGAACCTGAATGATCCAG
ATGATAACCATATTGGCATCGACATAAACGGAATCGAATCAAATCCAGTT
AATAGTCTGCTTGACGTTGATCTCAAAAGTGGACGAGCAATCCAGGTTCG
AATTTATTACAATCCAGACTTTGGACAACTCTCTGTTTATGCGGCATATT
CGGGGGAAACACTTGTGAAGGTGGTTGAAAAACCCATTAACCTGTCAGAT
ATAATTCCAACGCCCGTCTATGTTGGATTGACAGCAGCTACGGGGGACTT
TTTAGAAAGCCATGAGGTTATAAATTGGACCTTCAACTCGTTCCCAGTGC
CGCCTTCTCTCAAGGAGACAAACCTG
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