CK934957

Overview
NameCK934957
Unique NameCK934957
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1747 contig Csv1_Contig1747:1..851. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934957 vs. ExPASy Swiss-Prot
Match: OPDA_HAEIN (Oligopeptidase A OS=Haemophilus influenzae GN=prlC PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.409e-32
Identity = 73/233 (31.33%), Postives = 131/233 (56.22%), Query Frame = 2
Query:  119 NPLLQDFEFPPFDVVKAEHVRPGIRALLKQLESDLDELERTVEPSWPKLVEPLEKIVDQLAVVWGMINHLKSVKDTPELRSAIEEVQPEKVKFQLRLGQSKPIYNAFKAIQESPEWNALSDARKRIVESQIKEAVLNGVSLEDDKREQFNKIEQELEKLSHKFSENVLDATKKFEKLITDKKEIEXXXXXXXXXXXXXXXSKGHENATAENGPWIITLDAPSFMSVMQHAKNR 817
            NPLL     PPF  +K EH+RP +  L++   + ++++ +    +W   + PL +  D+L   W  ++HL SVK++ ELR A +   P   ++   +GQ K +YNA+ A++ S E+   S A+K+ +E+ +++  L+G+ L ++K++++ +I   L +L+ +FS NVLDAT  +EKLI ++ E+                SKG +        +  TL+ PS++ VM + +NR
Sbjct:    5 NPLLNIQGLPPFSQIKPEHIRPAVEKLIQDCRNTIEQVLKQPHFTWENFILPLTETNDRLNRAWSPVSHLNSVKNSTELREAYQTCLPLLSEYSTWVGQHKGLYNAYLALKNSAEFADYSIAQKKAIENSLRDFELSGIGLSEEKQQRYGEIVARLSELNSQFSNNVLDATMGWEKLIENEAELAGLPESALQAAQQSAESKGLKG-------YRFTLEIPSYLPVMTYCENR 230          
BLAST of CK934957 vs. ExPASy Swiss-Prot
Match: OPDA_SALTY (Oligopeptidase A OS=Salmonella typhimurium GN=prlC PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.840e-32
Identity = 75/234 (32.05%), Postives = 132/234 (56.41%), Query Frame = 2
Query:  119 NPLLQDFEFPPFDVVKAEHVRPGIRALLKQLESDLDELERTVEP-SWPKLVEPLEKIVDQLAVVWGMINHLKSVKDTPELRSAIEEVQPEKVKFQLRLGQSKPIYNAFKAIQESPEWNALSDARKRIVESQIKEAVLNGVSLEDDKREQFNKIEQELEKLSHKFSENVLDATKKFEKLITDKKEIEXXXXXXXXXXXXXXXSKGHENATAENGPWIITLDAPSFMSVMQHAKNR 817
            NPLL  F  PPF  +K EHV P +   L    + ++ +     P SW  L +PL +  D L  ++  I+HL SVK++PELR A E+  P   ++   +GQ + +YNA++ +++   +  L+ A+K+ V++ +++  L+G+ L  +K++++ +I   L +L +++S NVLDAT  + KLITD+ E+                +K    A  + G +++TLD PS++ VM +  N+
Sbjct:    3 NPLLTSFSLPPFSAIKPEHVVPAVTKALADCRAAVEGVVAHGAPYSWENLCQPLAEADDVLGRIFSPISHLNSVKNSPELREAYEQTLPLLSEYSTWVGQHEGLYNAYRDLRDGDHYATLNTAQKKAVDNALRDFELSGIGLPKEKQQRYGEIATRLSELGNQYSNNVLDATMGWTKLITDEAEL------AGMPESALAAAKAQAEAKEQEG-YLLTLDIPSYLPVMTYCDNQ 229          
BLAST of CK934957 vs. ExPASy Swiss-Prot
Match: OPDA_ECOLI (Oligopeptidase A OS=Escherichia coli (strain K12) GN=prlC PE=3 SV=3)

HSP 1 Score: 135.961 bits (341), Expect = 2.657e-31
Identity = 70/234 (29.91%), Postives = 130/234 (55.56%), Query Frame = 2
Query:  119 NPLLQDFEFPPFDVVKAEHVRPGIRALLKQLESDLDELERTVEP-SWPKLVEPLEKIVDQLAVVWGMINHLKSVKDTPELRSAIEEVQPEKVKFQLRLGQSKPIYNAFKAIQESPEWNALSDARKRIVESQIKEAVLNGVSLEDDKREQFNKIEQELEKLSHKFSENVLDATKKFEKLITDKKEIEXXXXXXXXXXXXXXXSKGHENATAENGPWIITLDAPSFMSVMQHAKNR 817
            NPLL  FE PPF  +  EHV P +   L     +++ +     P +W  L +PL ++ D L  ++  ++HL SVK++PELR A E+  P   ++   +GQ + +Y A++ +++   +  L+ A+K+ V++ +++  L+G+ L  +K++++ +I   L +L +++S NVLDAT  + KL+TD+ E+                +K  E        +++TLD PS++ VM +  N+
Sbjct:    3 NPLLTPFELPPFSKILPEHVVPAVTKALNDCRENVERVVAQGAPYTWENLCQPLAEVDDVLGRIFSPVSHLNSVKNSPELREAYEQTLPLLSEYSTWVGQHEGLYKAYRDLRDGDHYATLNTAQKKAVDNALRDFELSGIGLPKEKQQRYGEIATRLSELGNQYSNNVLDATMGWTKLVTDEAELAGMPESALAAAKAQAEAKELEG-------YLLTLDIPSYLPVMTYCDNQ 229          
The following BLAST results are available for this feature:
BLAST of CK934957 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
OPDA_HAEIN1.409e-3231.33Oligopeptidase A OS=Haemophilus influenzae GN=prlC... [more]
OPDA_SALTY1.840e-3232.05Oligopeptidase A OS=Salmonella typhimurium GN=prlC... [more]
OPDA_ECOLI2.657e-3129.91Oligopeptidase A OS=Escherichia coli (strain K12) ... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004224_F08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIIF_F08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934957 ID=CK934957; Name=CK934957; organism=Citrus sinensis; type=EST; length=852bp
GGGGAAATCCAAAACGACCTCACTCTCTTTCTCTACTAGTTCTGCTTGCC
CCCCTCCTTCACTCTCTATGGCCGCCTCCGCGACTGCTTCCGCTGTTGAT
GACTTATCTCTCGAAGACAATCCGTTGTTGCAGGACTTTGAGTTTCCTCC
TTTTGATGTCGTTAAGGCCGAGCATGTCAGGCCTGGGATTCGTGCTCTTT
TGAAACAACTGGAAAGTGATTTGGATGAACTGGAGAGAACAGTGGAGCCG
TCGTGGCCAAAGTTGGTGGAGCCACTGGAGAAGATTGTAGATCAACTGGC
TGTTGTTTGGGGGATGATCAATCATCTGAAGTCTGTTAAGGACACTCCTG
AGCTCCGTTCTGCCATTGAAGAAGTCCAGCCAGAGAAAGTGAAGTTTCAG
CTTCGTTTGGGTCAAAGCAAACCCATCTACAATGCATTCAAAGCTATTCA
AGAATCTCCTGAATGGAATGCTTTGAGTGATGCTCGCAAACGTATAGTCG
AATCACAAATAAAGGAAGCGGTTCTCAACGGTGTCTCACTGGAAGATGAT
AAACGAGAACAATTTAACAAGATTGAGCAGGAACTGGAAAAACTATCTCA
TAAATTTTCAGAGAATGTTTTGGACGCCACAAAGAAATTTGAAAAGTTAA
TAACCGATAAGAAAGAAATTGAAGGATTACCTGCCACTGCTCTTGGTTTG
GCTGCACAAACAGCGTTGTCCAAGGGGCATGAAAATGCAACTGCTGAGAA
TGGGCCATGGATAATTACATTGGACGCTCCAAGTTTTATGTCCGTCATGC
AACATGCTAAAAATCGTGTTTTTGCGTGAGGAAGTCTATCGAACTTATGT
GA
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