CK934991
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934991 vs. ExPASy Swiss-Prot
Match: RTNLL_ARATH (Reticulon-like protein B12 OS=Arabidopsis thaliana GN=RTNLB12 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 6.896e-44 Identity = 89/192 (46.35%), Postives = 124/192 (64.58%), Query Frame = 3 Query: 129 MGSSSDRLFKRQRTIHEILGGGLAADVILWRQKNVTVGILLVTLAAWVVFERSGYTXXXXXXXXXXXXXXXXXXXXXXXXXXNRPAPPLPELHLSEEMVNEVAALVRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKID 704 M SSSD+LF R RTIHEILGGG+ ADV+LWR+KNV+VGI+ VT+A+W+VFE YT NRP+PPLPE +SE M E + +R VN L VS D+A+ ++S L+ +VA+ L+L+S +G L DF TL +TS+++V+T+PA YERYED+I K R+LY++++ Sbjct: 1 MSSSSDKLFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLLLLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDSELYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYIVGSIEFICNKTRELYLRLE 192
BLAST of CK934991 vs. ExPASy Swiss-Prot
Match: RTNLP_ARATH (Reticulon-like protein B16 OS=Arabidopsis thaliana GN=RTNLB16 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.627e-35 Identity = 78/215 (36.28%), Postives = 123/215 (57.21%), Query Frame = 3 Query: 111 FSVSSKMGSSSD-RLFKRQRTIHEILGGGLAADVILWRQKNVTVGILLVTLAAWVVFERSGYTXXXXXXXXXXXXXXXXXXXXXXXXXXNRPAPPLPELHLSEEMVNEVAALVRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDKEFVSKVRKWILEKQK 752 F ++ GSSSD RL RQ T+H+ +GGG AAD++LWR++++++G+++++ AW++FE SG NR LPEL LSEEMVN AA R ++N L ++ D+ +G + RLFF+V + LWL+S +G TL Y ++ +T+PALY +Y+ +DK +R+L Y +D+ +S++ W L K K Sbjct: 11 FDGRNEGGSSSDYRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVISRL-SWSLSKDK 224
BLAST of CK934991 vs. ExPASy Swiss-Prot
Match: RTNLD_ARATH (Reticulon-like protein B4 OS=Arabidopsis thaliana GN=RTNLB4 PE=1 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.005e-31 Identity = 70/217 (32.26%), Postives = 120/217 (55.30%), Query Frame = 3 Query: 114 SVSSKMGSSSDRLFKRQRTIHEILGGGLAADVILWRQKNVTVGILLVTLAAWVVFERSGYTXXXXXXXXXXXXXXXXXXXXXXXXXXNRPAPPLPELHLSEEMVNEVAALVRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKID----KEFVSKVRKWILEKQK 752 S SS S RLF R++ +H++LGGG AD+ LWR K V+ G+L A+WV+FE Y ++ P +PE+H+ E+ + ++ + +R +N L++ +++A GK+ + F V LW++S +G +FLTL YT+ V++ T+P LYE+YED +D Y R++++ Y +D ++ +SK+ + L K+K Sbjct: 40 SSSSSFKSKIYRLFGREKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAVLDEKVLRKVISKIPRGALNKKK 256
BLAST of CK934991 vs. ExPASy Swiss-Prot
Match: RTNLA_ARATH (Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.649e-29 Identity = 68/213 (31.92%), Postives = 116/213 (54.46%), Query Frame = 3 Query: 114 SVSSKMGSSSDRLFKRQRTIHEILGGGLAADVILWRQKNVTVGILLVTLAAWVVFERSGYTXXXXXXXXXXXXXXXXXXXXXXXXXXNRPAPPLPELHLSEEMVNEVAALVRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDKEFVSKVRKWILEKQK 752 S SS M S RLF R++ +H++LGGG AD+ +W+ K ++ G+L AAWVVFE Y N+ P +PE+H+ EE + ++A+ +R +N S +++A G++ + F LW++S +GG +FLTL Y +LV++ T+P Y++YED +D +L++ Y +D++ +SK+ L+ +K Sbjct: 61 SPSSSMKSKVYRLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLDEKVLSKIPLGPLKNKK 273
BLAST of CK934991 vs. ExPASy Swiss-Prot
Match: RTNLE_ARATH (Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.813e-29 Identity = 67/193 (34.72%), Postives = 107/193 (55.44%), Query Frame = 3 Query: 147 RLFKRQRTIHEILGGGLAADVILWRQKNVTVGILLVTLAAWVVFERSGYTXXXXXXXXXXXXXXXXXXXXXXXXXXNRPAPPLPELHLSEEMVNEVAALVRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDKEFVSKV 725 R+F R++ +H++LGGG ADV LWR K ++ +L V A WV+FE Y N+ +P +PE+H+ EE VA+ +R +N + + +ALG++ + F V + LW+IS VG +FLTL Y VI+ T+P LYE++ED +D A ++L++ YV D++ +SK+ Sbjct: 51 RMFGREKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLSKI 243
BLAST of CK934991 vs. ExPASy Swiss-Prot
Match: RTNLF_ARATH (Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.266e-29 Identity = 65/193 (33.68%), Postives = 105/193 (54.40%), Query Frame = 3 Query: 147 RLFKRQRTIHEILGGGLAADVILWRQKNVTVGILLVTLAAWVVFERSGYTXXXXXXXXXXXXXXXXXXXXXXXXXXNRPAPPLPELHLSEEMVNEVAALVRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDKEFVSKV 725 RLF R++ +H++LGGGL ADV LWR K ++ +L V A WV+FE Y N+ P +PE+H+ EE + + +R +N + + +ALG++ + F V LW+IS VG +FLTL Y V++ T+P LYE++ED +D A ++L++ Y+ D++ +SK+ Sbjct: 51 RLFGREKPVHKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLSNAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVFGLWIISVVGNWFNFLTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDEKVLSKL 243
BLAST of CK934991 vs. ExPASy Swiss-Prot
Match: RTNLB_ARATH (Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.062e-28 Identity = 61/202 (30.20%), Postives = 109/202 (53.96%), Query Frame = 3 Query: 147 RLFKRQRTIHEILGGGLAADVILWRQKNVTVGILLVTLAAWVVFERSGYTXXXXXXXXXXXXXXXXXXXXXXXXXXNRPAPPLPELHLSEEMVNEVAALVRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDKEFVSKVRKWILEKQK 752 RLF R+R +H++LGGG AD+ +W+ K ++ G+ AWV+FE Y ++ P +PE+H+ EE + ++A+ +R +N +S +++A G++ + F LW++S +GG FLTL Y +LV++ T+P Y++YED +D Y +L++ Y +D + SK+ + L+ +K Sbjct: 68 RLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAKVFSKIPRGPLKDKK 269
BLAST of CK934991 vs. ExPASy Swiss-Prot
Match: RTNLC_ARATH (Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 5.305e-28 Identity = 63/202 (31.19%), Postives = 112/202 (55.45%), Query Frame = 3 Query: 120 SSKMGSSSDRLFKRQRTIHEILGGGLAADVILWRQKNVTVGILLVTLAAWVVFERSGYTXXXXXXXXXXXXXXXXXXXXXXXXXXNRPAPPLPELHLSEEMVNEVAALVRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDKEFVSKV 725 S+ + + RLF R++ +H++ GGG AD+ LWR K V+ G+L +W++FE Y ++ +PE+H+ E++V ++A+ +R +N +V +D+A G++ + F V LW++S VG +FLTL Y + V++ T+P LYE+YED +D + R++++ YV+ D + +SKV Sbjct: 38 SASLKTKIYRLFGREQPLHKLFGGGKPADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFDVKVLSKV 239
BLAST of CK934991 vs. ExPASy Swiss-Prot
Match: RTNLJ_ARATH (Reticulon-like protein B10 OS=Arabidopsis thaliana GN=RTNLB10 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.016e-27 Identity = 62/188 (32.98%), Postives = 104/188 (55.32%), Query Frame = 3 Query: 162 QRTIHEILGGGLAADVILWRQKNVTVGILLVTLAAWVVFERSGYTXXXXXXXXXXXXXXXXXXXXXXXXXXNRPAPPLPELHLSEEMVNEVAALVRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDKEFVSKV 725 + ++H+ + G AD+I+W+ + +L T W +FE+ GY+ NRP P LP L ++EE V VA +R +N L+V++++ +G+N++ FRV++ LW +SFVG +FLT+ Y +V+ L +P LYERY+D ID+ L +R ++ Y KID+ + K+ Sbjct: 2 EESVHQSIRFGSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVILFLWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFRVSVVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLIDEKLSLTHRVIQTQYRKIDERLLQKI 189
BLAST of CK934991 vs. ExPASy Swiss-Prot
Match: RTNLH_ARATH (Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.485e-26 Identity = 67/205 (32.68%), Postives = 96/205 (46.83%), Query Frame = 3 Query: 111 FSVSSKMGSSSDRLFKRQRTIHEILGGGLAADVILWRQKNVTVGILLVTLAAWVVFERSGYTXXXXXXXXXXXXXXXXXXXXXXXXXXNRPAPPLPELHLSEEMVNEVAALVRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDKEFVSKV 725 F + S +RLF RQ+ IH +LGGG +ADV+LWR K ++ +L+ A WV+FE + NR +P L L ++ EV V VN L QD+A N + F + LW+ + VG +FLT+ Y V T+P LYERYED +D + K Y K+D F+S++ Sbjct: 32 FEQEDSVSSRFNRLFDRQKPIHHVLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFVWSNASGFLNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVIGLWVAAMVGSCCNFLTVLYIGFVGAHTMPVLYERYEDEVDGFMDSMIMKFHSHYKKLDTGFLSRI 236 The following BLAST results are available for this feature:
BLAST of CK934991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934991 ID=CK934991; Name=CK934991; organism=Citrus sinensis; type=EST; length=780bpback to top |