CK935000
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935000 vs. ExPASy Swiss-Prot
Match: HIS2_ARATH (Histidine biosynthesis bifunctional protein hisIE, chloroplastic OS=Arabidopsis thaliana GN=At1g31860 PE=2 SV=1) HSP 1 Score: 251.521 bits (641), Expect = 2.415e-66 Identity = 125/178 (70.22%), Postives = 146/178 (82.02%), Query Frame = 3 Query: 24 RDNDMK-RNCLVFASSTESNSNPVLQSKVDRLLDSVKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKDQPVQGNNLAMTTLYSLESTISQRKAAS---KDGKPSWT 545 RD ++ R+ +VFA + N N LQ+KVD LLD +KWD+KGLAVAIAQNVDTGA+LMQGF NR+AL+TTISSRKATF+SRSRSTLWTKGETS NFIN+ D+++DCDRDSIIYLG PDGPTCHTG ETCYYTSV D L + GN LA+TTLYSLES IS+RK S ++GKPSWT Sbjct: 26 RDTKLRSRSNVVFACN--DNKNIALQAKVDNLLDRIKWDDKGLAVAIAQNVDTGAVLMQGFVNREALSTTISSRKATFFSRSRSTLWTKGETSNNFINILDVYVDCDRDSIIYLGTPDGPTCHTGEETCYYTSVFDQLNNDEASGNKLALTTLYSLESIISKRKEESTVPQEGKPSWT 201
BLAST of CK935000 vs. ExPASy Swiss-Prot
Match: HIS2_THET2 (Histidine biosynthesis bifunctional protein hisIE OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=hisI PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 7.859e-25 Identity = 49/108 (45.37%), Postives = 73/108 (67.59%), Query Frame = 3 Query: 117 LDSVKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKD 440 L +V++D KGL + Q+ TG +L +ANR+AL T+ +R++TF+SRSR LW KGETS + V ++ LDCD D+++Y P GP CHTG TC++ ++L+ KD Sbjct: 3 LSAVRFDEKGLVPVVVQDARTGEVLTLAYANREALEETLRTRRSTFFSRSRQALWRKGETSGHTQEVVEVLLDCDGDAVVYRVLPQGPACHTGERTCFHRALLEGEKD 110
BLAST of CK935000 vs. ExPASy Swiss-Prot
Match: HIS2_YERPE (Histidine biosynthesis bifunctional protein hisIE OS=Yersinia pestis GN=hisI PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.255e-22 Identity = 57/150 (38.00%), Postives = 85/150 (56.67%), Query Frame = 3 Query: 69 TESNSNPVLQSKVDRLLDSVKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKDQPVQGNNLAMTTLYSLESTISQRKAA 518 TE N + KVD L+ AI Q+ +G +LM G+ N++ALA T + K TF+SR++ LWTKGE+S +F+NV +I+ DCD D+++ L KP GPTCH G+ +C+ + D + LY LE ++ RK+A Sbjct: 3 TEQQINQLDWEKVDHLMP-----------AIVQHAVSGEVLMMGYMNQEALAVTEKTGKVTFFSRTKQRLWTKGESSGHFLNVVNIYPDCDNDTLLILVKPIGPTCHLGNSSCFAPAASD-------------WSFLYQLEQLLASRKSA 128
BLAST of CK935000 vs. ExPASy Swiss-Prot
Match: HIS2_PHOPR (Histidine biosynthesis bifunctional protein hisIE OS=Photobacterium profundum GN=hisI PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.255e-22 Identity = 54/145 (37.24%), Postives = 90/145 (62.07%), Query Frame = 3 Query: 114 LLDSVKWDN-KGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKDQPVQGNNLAMTTLYSLESTISQRKAASKDGKPSWT 545 L+ ++ W+ GL A+ Q+ +G +LM G+ N++AL T+ +++ TF+SR++ LWTKGETS N + ++ I LDCD+D+++ P GPTCH G+ TC+ + ++QP A+ L+ LE ++ RK A D + S+T Sbjct: 3 LVTTINWEKVDGLVPAVIQDNTSGQVLMLGYMNKEALNKTLETKQVTFWSRTKERLWTKGETSGNVLELKSINLDCDQDTLLVKVNPVGPTCHLGTPTCFDNDA-EGKQEQP------ALVFLHQLEQVLANRKGA--DPESSYT 138
BLAST of CK935000 vs. ExPASy Swiss-Prot
Match: HIS2_VIBPA (Histidine biosynthesis bifunctional protein hisIE OS=Vibrio parahaemolyticus GN=hisI PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.639e-22 Identity = 56/144 (38.89%), Postives = 84/144 (58.33%), Query Frame = 3 Query: 99 SKVDRLLDSVKWDN-KGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKDQPVQGNNLAMTTLYSLESTISQRKAASKD 527 ++V L + + W+ GL AI Q+ + +LM G+ N+DALA T + + TF+SR++ LWTKGETS N + + +I LDCD D+++ P GPTCHTG+ TC+ D Q + M L+ LE ++ RK+A D Sbjct: 6 AEVSSLSERINWEKVDGLVPAIVQDFQSSQVLMMGYMNQDALAKTGETGQVTFFSRTKERLWTKGETSGNVLQLVNISLDCDNDTLLVRVNPIGPTCHTGTTTCW---------DGDAQEES-QMVWLHQLEQLLAARKSADPD 139
BLAST of CK935000 vs. ExPASy Swiss-Prot
Match: HIS2_HAEIN (Histidine biosynthesis bifunctional protein hisIE OS=Haemophilus influenzae GN=hisI PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.639e-22 Identity = 53/135 (39.26%), Postives = 78/135 (57.78%), Query Frame = 3 Query: 117 LDSVKWDN-KGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKDQPVQGNNLAMTTLYSLESTISQRKAA 518 + + W GL I QN+ T +LM G+ N +AL TI RK TF+SR++ LWTKGE S NF+NV+++ LDCD D+++ L P G TCHTG +C++ +++ Q N A LE + ++K A Sbjct: 3 ITKIDWQKVNGLLPVIIQNISTREVLMLGYMNEEALTKTIKERKVTFFSRTKQRLWTKGEISGNFLNVEEMSLDCDNDTLLILVDPIGATCHTGEYSCFHQFTSPQSENKKQQFANWAW--FIKLEQHLKEKKNA 135
BLAST of CK935000 vs. ExPASy Swiss-Prot
Match: HIS2_SHISS (Histidine biosynthesis bifunctional protein hisIE OS=Shigella sonnei (strain Ss046) GN=hisI PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.140e-22 Identity = 62/152 (40.79%), Postives = 87/152 (57.24%), Query Frame = 3 Query: 90 VLQSKVDRLLDSVKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKDQPVQGNNLAMTTLYSLESTISQRKAASKDGKPSWT 545 +L + R LD K D GL I Q+ +G +LM G+ N +AL TI S K TF+SR++ LWTKGETS NF+NV +I DCD D+++ L P GPTCH G+ +C+ + L LY LE +++RK+A D + S+T Sbjct: 1 MLTEQQRRELDWEKTD--GLMPVIVQHAVSGEVLMLGYMNPEALDKTIESGKVTFFSRTKQRLWTKGETSGNFLNVVNIAPDCDNDTLLVLANPIGPTCHKGTSSCFGDTAHQWL-------------FLYQLEQLLAERKSA--DPETSYT 135
BLAST of CK935000 vs. ExPASy Swiss-Prot
Match: HIS2_ECO57 (Histidine biosynthesis bifunctional protein hisIE OS=Escherichia coli O157:H7 GN=hisI PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.140e-22 Identity = 62/152 (40.79%), Postives = 87/152 (57.24%), Query Frame = 3 Query: 90 VLQSKVDRLLDSVKWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKDQPVQGNNLAMTTLYSLESTISQRKAASKDGKPSWT 545 +L + R LD K D GL I Q+ +G +LM G+ N +AL TI S K TF+SR++ LWTKGETS NF+NV +I DCD D+++ L P GPTCH G+ +C+ + L LY LE +++RK+A D + S+T Sbjct: 1 MLTEQQRRELDWEKTD--GLMPVIVQHAVSGEVLMLGYMNPEALDKTIESGKVTFFSRTKQRLWTKGETSGNFLNVVNIAPDCDNDTLLVLANPIGPTCHKGTSSCFGDTAHQWL-------------FLYQLEQLLAERKSA--DPETSYT 135
BLAST of CK935000 vs. ExPASy Swiss-Prot
Match: HIS3_ERYLH (Phosphoribosyl-AMP cyclohydrolase OS=Erythrobacter litoralis (strain HTCC2594) GN=hisI PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.795e-22 Identity = 51/105 (48.57%), Postives = 69/105 (65.71%), Query Frame = 3 Query: 129 KWDNKGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSV-LDALKD 440 K+D+ GL A+ Q+VDT +LM F N DAL T + A F+SRSR TLW KG TS N + V + +DCD+D++I L +P GP CHTG+ TC+Y + AL+D Sbjct: 18 KFDSDGLLTAVVQHVDTREVLMVAFMNADALDATRKTGIAHFFSRSRQTLWKKGGTSGNTLAVSQVLVDCDQDAVILLVEPAGPACHTGARTCFYRELDCGALQD 122
BLAST of CK935000 vs. ExPASy Swiss-Prot
Match: HIS2_VIBVY (Histidine biosynthesis bifunctional protein hisIE OS=Vibrio vulnificus (strain YJ016) GN=hisI PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.795e-22 Identity = 56/147 (38.10%), Postives = 85/147 (57.82%), Query Frame = 3 Query: 90 VLQSKVDRLLDSVKWDN-KGLAVAIAQNVDTGAILMQGFANRDALATTISSRKATFYSRSRSTLWTKGETSQNFINVQDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVLDALKDQPVQGNNLAMTTLYSLESTISQRKAASKD 527 V ++V L + + W+ GL AI Q+ + +LM G+ N+DALA T + + TF+SR++ LWTKGETS N + + ++ LDCD D+++ P GPTCHTG+ TC+ D + Q M L+ LE ++ RK+A D Sbjct: 3 VKAAEVSSLAERINWEKVDGLVPAIVQDFQSSQVLMMGYMNQDALAKTGETGQVTFFSRTKERLWTKGETSGNVLQLVNMSLDCDNDTLLVKVNPIGPTCHTGTTTCW-----DGDPQEESQ-----MVWLHQLEQLLAARKSADPD 139 The following BLAST results are available for this feature:
BLAST of CK935000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 345
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935000 ID=CK935000; Name=CK935000; organism=Citrus sinensis; type=EST; length=609bpback to top |