CK935002

Overview
NameCK935002
Unique NameCK935002
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12395 contig Csv1_Contig12395:3..905. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935002 vs. ExPASy Swiss-Prot
Match: DCAM_CATRO (S-adenosylmethionine decarboxylase proenzyme OS=Catharanthus roseus GN=SAMDC PE=1 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 6.477e-55
Identity = 107/128 (83.59%), Postives = 118/128 (92.19%), Query Frame = 2
Query:  518 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSESSLFVYPYKVIIKTRGTTKLLLSIPAILKLAESLSLSVRSVRYTRGSFIFAGAQPFPH 901
            MALP SAIGFEGYEKRLE+SFFE   FADP G+GLR+L+K Q+DEIL+PAECTIV SLSN++LDSYVLSESSLFVYPYK+IIKT GTTKLLLSIPAILKLAESLSLSVR+V+YTRGSFIF GAQ FPH
Sbjct:    1 MALPASAIGFEGYEKRLEISFFESSFFADPDGKGLRALNKSQIDEILEPAECTIVDSLSNQYLDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIPAILKLAESLSLSVRNVKYTRGSFIFPGAQSFPH 128          
BLAST of CK935002 vs. ExPASy Swiss-Prot
Match: DCAM_NICSY (S-adenosylmethionine decarboxylase proenzyme OS=Nicotiana sylvestris GN=SAMDC1 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 9.353e-54
Identity = 106/128 (82.81%), Postives = 116/128 (90.62%), Query Frame = 2
Query:  518 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSESSLFVYPYKVIIKTRGTTKLLLSIPAILKLAESLSLSVRSVRYTRGSFIFAGAQPFPH 901
            MALPVSAIGFEG+EKRLE+SFFEPG+FADP G+GLRSLSK QLDEIL PAECTIV SLSN+ +DSYVLSESSLFVY YK+IIKT GTTKLLL+IP ILKLAE+LSL V+ VRYTRGSFIF GAQ FPH
Sbjct:    3 MALPVSAIGFEGFEKRLEISFFEPGLFADPNGKGLRSLSKAQLDEILGPAECTIVDSLSNDDVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIPPILKLAETLSLKVQDVRYTRGSFIFPGAQSFPH 130          
BLAST of CK935002 vs. ExPASy Swiss-Prot
Match: DCAM_TOBAC (S-adenosylmethionine decarboxylase proenzyme OS=Nicotiana tabacum GN=SAMDC PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 3.554e-53
Identity = 105/127 (82.68%), Postives = 115/127 (90.55%), Query Frame = 2
Query:  521 ALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSESSLFVYPYKVIIKTRGTTKLLLSIPAILKLAESLSLSVRSVRYTRGSFIFAGAQPFPH 901
            ALPVSAIGFEG+EKRLE+SFFEPG+FADP G+GLRSLSK QLDEIL PAECTIV SLSN+ +DSYVLSESSLFVY YK+IIKT GTTKLLL+IP ILKLAE+LSL V+ VRYTRGSFIF GAQ FPH
Sbjct:    4 ALPVSAIGFEGFEKRLEISFFEPGLFADPNGKGLRSLSKAQLDEILGPAECTIVDSLSNDDVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIPPILKLAETLSLKVQDVRYTRGSFIFPGAQSFPH 130          
BLAST of CK935002 vs. ExPASy Swiss-Prot
Match: DCAM_SOLTU (S-adenosylmethionine decarboxylase proenzyme OS=Solanum tuberosum GN=SAMDC PE=1 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 5.132e-52
Identity = 102/129 (79.07%), Postives = 116/129 (89.92%), Query Frame = 2
Query:  515 KMALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSESSLFVYPYKVIIKTRGTTKLLLSIPAILKLAESLSLSVRSVRYTRGSFIFAGAQPFPH 901
            +M LPVSAIGFEG+EKRLE+SF EPG+FADP G+GLRSLSK QLDEIL PAECTIV +LSN+++DSYVLSESSLFVY YK+IIKT GTTKLLL+IP IL+LAE+LSL V+ VRYTRGSFIF GAQ FPH
Sbjct:    2 EMDLPVSAIGFEGFEKRLEISFVEPGLFADPNGKGLRSLSKAQLDEILGPAECTIVDNLSNDYVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIPPILRLAETLSLKVQDVRYTRGSFIFPGAQSFPH 130          
BLAST of CK935002 vs. ExPASy Swiss-Prot
Match: DCAM_DATST (S-adenosylmethionine decarboxylase proenzyme OS=Datura stramonium GN=SAMDC PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 1.143e-51
Identity = 101/129 (78.29%), Postives = 116/129 (89.92%), Query Frame = 2
Query:  515 KMALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSESSLFVYPYKVIIKTRGTTKLLLSIPAILKLAESLSLSVRSVRYTRGSFIFAGAQPFPH 901
            +M LPVSAIGFEG+EKRLE+SF EPG+F+DP G+GLRSLSK QLDEIL PAECTIV +LSN+++DSYVLSESSLFVY YK+IIKT GTTKLLL+IP IL+LAE+LSL V+ VRYTRGSFIF GAQ FPH
Sbjct:    2 EMDLPVSAIGFEGFEKRLEISFVEPGLFSDPNGKGLRSLSKAQLDEILGPAECTIVDNLSNDYVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIPPILRLAETLSLKVQDVRYTRGSFIFPGAQSFPH 130          
BLAST of CK935002 vs. ExPASy Swiss-Prot
Match: DCAM_SOLCI (S-adenosylmethionine decarboxylase proenzyme OS=Solanum chilense GN=SAMDC PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.493e-51
Identity = 101/128 (78.91%), Postives = 115/128 (89.84%), Query Frame = 2
Query:  518 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSESSLFVYPYKVIIKTRGTTKLLLSIPAILKLAESLSLSVRSVRYTRGSFIFAGAQPFPH 901
            M LPVSAIGFEG+EKRLE+SF EPG+FADP G+GLRSL+K QLDEIL PAECTIV +LSN+++DSYVLSESSLFVY YK+IIKT GTTKLLL+IP IL+LAE+LSL V+ VRYTRGSFIF GAQ FPH
Sbjct:    1 MDLPVSAIGFEGFEKRLEISFVEPGLFADPNGKGLRSLTKAQLDEILGPAECTIVDNLSNDYVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIPPILRLAETLSLKVQDVRYTRGSFIFPGAQSFPH 128          
BLAST of CK935002 vs. ExPASy Swiss-Prot
Match: DCAM_PEA (S-adenosylmethionine decarboxylase proenzyme OS=Pisum sativum GN=SAMDC PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.547e-51
Identity = 102/126 (80.95%), Postives = 115/126 (91.27%), Query Frame = 2
Query:  524 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSESSLFVYPYKVIIKTRGTTKLLLSIPAILKLAESLSLSVRSVRYTRGSFIFAGAQPFPH 901
            + VSAIGFEG+EKRLE+SF +PG+F+DP GRGLRSL+K QLDEIL PAECTIVSSL+NE +DSYVLSESSLFVY YK+IIKT GTTKLLLSIP ILKLA+S+SL+VRSVRYTRGSFIF GAQ FPH
Sbjct:    1 MAVSAIGFEGFEKRLEISFSDPGLFSDPQGRGLRSLTKSQLDEILAPAECTIVSSLANEDVDSYVLSESSLFVYAYKLIIKTCGTTKLLLSIPPILKLADSISLNVRSVRYTRGSFIFPGAQSFPH 126          
BLAST of CK935002 vs. ExPASy Swiss-Prot
Match: DCAM_IPONI (S-adenosylmethionine decarboxylase proenzyme OS=Ipomoea nil GN=SAMDC PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.547e-51
Identity = 100/128 (78.12%), Postives = 113/128 (88.28%), Query Frame = 2
Query:  518 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSESSLFVYPYKVIIKTRGTTKLLLSIPAILKLAESLSLSVRSVRYTRGSFIFAGAQPFPH 901
            MAL  SAIGFEGYEKRLE+SFFE G+F+DP GRGLR+LSK QLD++LKPAECTIVSSLSN  +DSYVLSESSLFVYPYK+IIKT GTTKLLLSIP IL+LA+ LSL V+SV+YTRGSF F   QP+PH
Sbjct:    1 MALSTSAIGFEGYEKRLEISFFEAGIFSDPEGRGLRALSKEQLDKVLKPAECTIVSSLSNNEVDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIPPILELADGLSLKVKSVKYTRGSFNFPEVQPYPH 128          
BLAST of CK935002 vs. ExPASy Swiss-Prot
Match: DCAM_VICFA (S-adenosylmethionine decarboxylase proenzyme OS=Vicia faba GN=SAMDC PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.345e-51
Identity = 101/126 (80.16%), Postives = 114/126 (90.48%), Query Frame = 2
Query:  524 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSESSLFVYPYKVIIKTRGTTKLLLSIPAILKLAESLSLSVRSVRYTRGSFIFAGAQPFPH 901
            + VSAIGFEG+EKRLE+SF +PG+F+DP GRGLRSL+K QLDEIL PAECTIVSSL+NE +DSYVLSESSLFVY YK+IIKT GTTKLLL+IP ILKLAES+SL VR+VRYTRGSFIF GAQ FPH
Sbjct:    1 MAVSAIGFEGFEKRLEISFSDPGLFSDPQGRGLRSLTKSQLDEILAPAECTIVSSLANEDVDSYVLSESSLFVYAYKIIIKTCGTTKLLLAIPPILKLAESISLDVRAVRYTRGSFIFPGAQSFPH 126          
BLAST of CK935002 vs. ExPASy Swiss-Prot
Match: DCAM_DAUCA (S-adenosylmethionine decarboxylase proenzyme OS=Daucus carota GN=SAMDC PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.345e-51
Identity = 102/128 (79.69%), Postives = 113/128 (88.28%), Query Frame = 2
Query:  518 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEHLDSYVLSESSLFVYPYKVIIKTRGTTKLLLSIPAILKLAESLSLSVRSVRYTRGSFIFAGAQPFPH 901
            M+  VSAIGFEG+EKRLE+SFFEP  FADP G+GLR LSK+QLDE L PAECTIV+SLSNEH+DSYVLSESSLFVY YK+IIKT GTTKLL SIP ILKLA+SLSL+VRSVRYTRG FIF GAQ +PH
Sbjct:    1 MSSEVSAIGFEGFEKRLEISFFEPSFFADPEGKGLRVLSKNQLDEFLGPAECTIVASLSNEHVDSYVLSESSLFVYAYKIIIKTCGTTKLLKSIPPILKLADSLSLTVRSVRYTRGCFIFPGAQSYPH 128          
The following BLAST results are available for this feature:
BLAST of CK935002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
DCAM_CATRO6.477e-5583.59S-adenosylmethionine decarboxylase proenzyme OS=Ca... [more]
DCAM_NICSY9.353e-5482.81S-adenosylmethionine decarboxylase proenzyme OS=Ni... [more]
DCAM_TOBAC3.554e-5382.68S-adenosylmethionine decarboxylase proenzyme OS=Ni... [more]
DCAM_SOLTU5.132e-5279.07S-adenosylmethionine decarboxylase proenzyme OS=So... [more]
DCAM_DATST1.143e-5178.29S-adenosylmethionine decarboxylase proenzyme OS=Da... [more]
DCAM_SOLCI1.493e-5178.91S-adenosylmethionine decarboxylase proenzyme OS=So... [more]
DCAM_PEA2.547e-5180.95S-adenosylmethionine decarboxylase proenzyme OS=Pi... [more]
DCAM_IPONI2.547e-5178.13S-adenosylmethionine decarboxylase proenzyme OS=Ip... [more]
DCAM_VICFA4.345e-5180.16S-adenosylmethionine decarboxylase proenzyme OS=Vi... [more]
DCAM_DAUCA4.345e-5179.69S-adenosylmethionine decarboxylase proenzyme OS=Da... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004224_B09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIIF_B09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935002 ID=CK935002; Name=CK935002; organism=Citrus sinensis; type=EST; length=903bp
GGGGATAACGAAACGGACGGAAGGAGATCGAAATTCGTTTTGTGAAACAG
AGTGAAAAATCAACCCTTCTTTAATCCTCAAGGAATTTTATTATTTTCTT
GGTCTCTGAATCGAGGGTTTTGCTTCTTGGTTTAGTGGGTTTGTTTTCGT
TATATTATCTGAGCAAGGCTGAATGATCTAATGGAGTCAAAAGGTGGTAA
GAAGAAGTCTAGCAGTAGTTCCTTATTCTACGAAACTCCTCTTGGTTACA
GCATTGAAGACGTTCGACCTCACGGTGGCATAAAGAAGTTCAGATCAGCT
GCATACTCAAACTGCGTCCGCAAACCATCCTGAGATCGTCCAATTTGTCC
CATACCCCCCCAAAAAAAAGCTCACTACTACTGCAATTTTAATTTTTTTT
AGTTTTAGCCGTCTTAATACTGCAATTTACTTGGCCTATTTCTTTTTCGA
CTTCCCTCGTTCTCTCGTTCTGCCCTCTTTGCTCTTTGCAATTGTCATTT
GTTTTCTGTAAGGCAAGATGGCCTTGCCAGTCTCTGCAATTGGATTTGAA
GGTTATGAAAAGAGGCTTGAAGTTTCCTTTTTTGAGCCTGGTGTCTTTGC
TGATCCTGGAGGTAGGGGCCTCCGCTCTCTGTCAAAACATCAATTGGATG
AAATACTGAAACCTGCGGAATGCACAATTGTTTCTTCGTTGTCAAATGAA
CATCTTGATTCATATGTCCTCTCAGAATCAAGCCTCTTTGTGTACCCTTA
CAAAGTTATTATCAAAACTCGTGGGACTACCAAGCTGCTTCTTTCAATCC
CTGCCATCCTCAAGTTAGCTGAGTCCCTCTCGTTGTCTGTTCGATCTGTG
AGATACACTCGTGGAAGCTTCATATTTGCTGGGGCTCAGCCATTTCCACA
CCG
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