CK935011
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935011 vs. ExPASy Swiss-Prot
Match: LBD21_ARATH (LOB domain-containing protein 21 OS=Arabidopsis thaliana GN=LBD21 PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 5.136e-50 Identity = 108/174 (62.07%), Postives = 125/174 (71.84%), Query Frame = 2 Query: 143 MRGHEPRSSSSCAACKLLKRKCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMIELQQDLAVARARLARYTTPAASSCAVLNDLCVGGSP---AFSDLAACGDFFDSFSQNSLELNRVGDMYDFSQVPYM 655 MRGHEPRSSSSCAACKLLKR+C PTCIFAPYFRS + FAKVHKVFGASNVSK+L EVPEEQR++TVNSLAYEAE RL+DPVYGCIGAIA LQ+KM+ELQ DLAVAR RL ++ S + L+D SP AF DL D +L+ +YD Q P++ Sbjct: 1 MRGHEPRSSSSCAACKLLKRRCTPTCIFAPYFRSSDLITFAKVHKVFGASNVSKLLGEVPEEQRQETVNSLAYEAEVRLKDPVYGCIGAIASLQKKMLELQHDLAVARTRLLAHSGVNNSQVSPLDD-----SPELAAFLDLVPYSDLMLLDGSTNLD----AYLYDLGQPPFV 165
BLAST of CK935011 vs. ExPASy Swiss-Prot
Match: LOB_ARATH (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana GN=LOB PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.895e-36 Identity = 77/128 (60.16%), Postives = 95/128 (74.22%), Query Frame = 2 Query: 167 SSSCAACKLLKRKCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMIELQQDLAVARARLARY--TTPAASSCAVLNDLCVGGSP 544 +S CAACK L+RKC+P CIFAPYF +EP KFA VHK+FGASNV+K+L E+ QRED VNSLAYEAEAR+RDPVYGC+GAI+ LQR++ LQ++L A A LA Y +T AA + + DL P Sbjct: 9 NSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAGAPGNVVDLVFQPQP 136
BLAST of CK935011 vs. ExPASy Swiss-Prot
Match: LBD6_MAIZE (LOB domain-containing protein 6 OS=Zea mays GN=LBD6 PE=1 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.200e-36 Identity = 70/116 (60.34%), Postives = 89/116 (76.72%), Query Frame = 2 Query: 164 SSSSCAACKLLKRKCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMIELQQDLAVARARLARYTTPAASSCA 511 + S CAACK L+RKC P C+FAPYF D P+KF VH+VFGASNV+K+L E+ QRED VNSLAYEA+ RLRDPVYGC+G I++LQ + +LQQDLA A+ L++Y AA+S + Sbjct: 30 TGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPFQREDAVNSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASAS 145
BLAST of CK935011 vs. ExPASy Swiss-Prot
Match: LBD6_ARATH (LOB domain-containing protein 6 OS=Arabidopsis thaliana GN=LBD6 PE=1 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 9.404e-36 Identity = 68/107 (63.55%), Postives = 88/107 (82.24%), Query Frame = 2 Query: 164 SSSSCAACKLLKRKCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMIELQQDLAVARARLARY 484 ++S CAACK L+RKC P C+FAPYF D+P+KFA VHKVFGASNV+K+L E+ QRED VNSLAYEA+ RLRDPVYGC+G I+LLQ ++ +LQ DL+ A++ L++Y Sbjct: 6 TNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY 112
BLAST of CK935011 vs. ExPASy Swiss-Prot
Match: LBD25_ARATH (LOB domain-containing protein 25 OS=Arabidopsis thaliana GN=LBD25 PE=2 SV=3) HSP 1 Score: 150.599 bits (379), Expect = 9.404e-36 Identity = 70/107 (65.42%), Postives = 86/107 (80.37%), Query Frame = 2 Query: 164 SSSSCAACKLLKRKCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMIELQQDLAVARARLARY 484 ++S CAACK L+RKC C+FAPYF +EP KFA VH++FGASNVSKIL EV QRED VNSLAYEAEARL+DPVYGC+GAI++LQR+++ LQ++L A L RY Sbjct: 36 TNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQREDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRY 142
BLAST of CK935011 vs. ExPASy Swiss-Prot
Match: LBD6_ORYSJ (LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=LBD6 PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.228e-35 Identity = 70/116 (60.34%), Postives = 89/116 (76.72%), Query Frame = 2 Query: 164 SSSSCAACKLLKRKCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMIELQQDLAVARARLARYTTPAASSCA 511 + S CAACK L+RKC P C+FAPYF D P+KF VH+VFGASNV+K+L E+ QRED VNSLAYEA+ RLRDPVYGC+ I++LQR + +LQQDLA A+ L++Y AA++ A Sbjct: 35 TGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDAVNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAAAAAA 150
BLAST of CK935011 vs. ExPASy Swiss-Prot
Match: LBD6_ORYSI (LOB domain-containing protein 6 OS=Oryza sativa subsp. indica GN=LBD6 PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.228e-35 Identity = 70/116 (60.34%), Postives = 89/116 (76.72%), Query Frame = 2 Query: 164 SSSSCAACKLLKRKCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMIELQQDLAVARARLARYTTPAASSCA 511 + S CAACK L+RKC P C+FAPYF D P+KF VH+VFGASNV+K+L E+ QRED VNSLAYEA+ RLRDPVYGC+ I++LQR + +LQQDLA A+ L++Y AA++ A Sbjct: 35 TGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDAVNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAAAAAA 150
BLAST of CK935011 vs. ExPASy Swiss-Prot
Match: IAL1_MAIZE (Protein IAL1 OS=Zea mays PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.228e-35 Identity = 67/116 (57.76%), Postives = 90/116 (77.59%), Query Frame = 2 Query: 164 SSSSCAACKLLKRKCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMIELQQDLAVARARLARYTTPAASSCA 511 + S CAACK L+RKC P C+FAPYF D P+KF +VH+VFGASNV+K++ E+ QRED +NSLAYEA+ R+RDPVYGC+G I++LQ + +LQQDLA A+ L++Y AA+S + Sbjct: 30 TGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVRVHRVFGASNVTKLMNEIHPLQREDAMNSLAYEADMRIRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASAS 145
BLAST of CK935011 vs. ExPASy Swiss-Prot
Match: LBD36_ARATH (LOB domain-containing protein 36 OS=Arabidopsis thaliana GN=LBD36 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.736e-35 Identity = 70/112 (62.50%), Postives = 85/112 (75.89%), Query Frame = 2 Query: 164 SSSSCAACKLLKRKCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMIELQQDLAVARARLARYTTPAA 499 SSS CAACK L+RKC C+FAPYF D+P+KFA VHKVFGASNV+K+L E+ QRED VNSL YEAEARLRDPVYGC+G I++LQ ++ ++ DL A+ LA Y P A Sbjct: 4 SSSPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAVNSLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELATYVGPQA 115
BLAST of CK935011 vs. ExPASy Swiss-Prot
Match: LBD10_ARATH (LOB domain-containing protein 10 OS=Arabidopsis thaliana GN=LBD10 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.316e-34 Identity = 67/112 (59.82%), Postives = 86/112 (76.79%), Query Frame = 2 Query: 164 SSSSCAACKLLKRKCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMIELQQDLAVARARLARYTTPAA 499 +S+ CAACKLL+RKC C+FAPYF P+KF VH+VFGASNV+KIL ++P +QREDTVNSL YEAEAR+RDP+YGC+G I+ LQ+ + ++QQDL A+ L Y P A Sbjct: 2 ASTPCAACKLLRRKCTQECVFAPYFPPTNPQKFIFVHRVFGASNVTKILNDLPPDQREDTVNSLFYEAEARIRDPIYGCVGLISFLQQYLKKIQQDLLTAKEELVGYLGPDA 113 The following BLAST results are available for this feature:
BLAST of CK935011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935011 ID=CK935011; Name=CK935011; organism=Citrus sinensis; type=EST; length=798bpback to top |