CK935016
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK935016 vs. ExPASy Swiss-Prot
Match: S38A6_XENTR (Probable sodium-coupled neutral amino acid transporter 6 OS=Xenopus tropicalis GN=slc38a6 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.920e-16 Identity = 55/168 (32.74%), Postives = 87/168 (51.79%), Query Frame = 3 Query: 135 AVPVIVTAFTFHFNVHPIGFEFDKPSD--MITAVRISLALCAAIYFSVGLFGYLLFGESIMSDILINFDQSSGSAISSLLNDLVRLSYALHLMLVFPMLNFSLRANIDELLFSQKPLLAKDTKRFLSITLVLLVFSYTAAITIPDIXXFFQFLGSTSAVCLAFIFPGV 632 A+P + +F H +V PI E PS M + +AL IY+ LFGYL F +++ S++L + S +L VRL L ++L P+++F R + + FS+ P R + +TLVL + AI +PD+ F +GST++ CL F+FPG+ Sbjct: 246 ALPTMAFSFLCHTSVLPIYCELKSPSKSKMQNVANVGIALSFLIYYISALFGYLTFYDNVKSELLQGY---SKYLPKDVLIITVRLCILLAVLLTVPLIHFPARKAVMMMFFSRYPF---SYIRHILVTLVLNIIIVLLAIYVPDMRSVFGVVGSTTSTCLLFVFPGL 407
BLAST of CK935016 vs. ExPASy Swiss-Prot
Match: S38A5_BOVIN (Sodium-coupled neutral amino acid transporter 5 OS=Bos taurus GN=SLC38A5 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.376e-14 Identity = 57/171 (33.33%), Postives = 82/171 (47.95%), Query Frame = 3 Query: 126 LFTAVPVIVTAFTFHFNVHPIGFEFDKPSD--MITAVRISLALCAAIYFSVGLFGYLLFGESIMSDILINFDQSSGSAISSLLNDLVRLSYALHLMLVFPMLNFSLRANIDELLFSQKPLLAKDTKRFLSITLVLLVFSYTAAITIPDIXXFFQFLGSTSAVCLAFIFPGV 632 +F VP++ AF H V PI E +PS M +S+ +Y FGYL F S+ +++L + Q LL VRL+ L + L P++ F +R + +LLF K A R ++I L+LLV I +P I F +GSTSA L FI P + Sbjct: 264 MFYTVPIMAFAFVCHPEVLPIYTELCRPSKRRMQAVANVSIGAMFCMYGLTATFGYLTFYSSVEAEMLHMYSQHD------LLILCVRLAVLLAVTLTVPVVLFPIRRALQQLLFPSK---AFSWPRHVAIALILLVLVNVLVICVPTIRDIFGVIGSTSAPSLIFILPSI 425
BLAST of CK935016 vs. ExPASy Swiss-Prot
Match: S38A6_HUMAN (Probable sodium-coupled neutral amino acid transporter 6 OS=Homo sapiens GN=SLC38A6 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.797e-14 Identity = 51/168 (30.36%), Postives = 82/168 (48.81%), Query Frame = 3 Query: 135 AVPVIVTAFTFHFNVHPIGFEFDKPSD--MITAVRISLALCAAIYFSVGLFGYLLFGESIMSDILINFDQSSGSAISSLLNDLVRLSYALHLMLVFPMLNFSLRANIDELLFSQKPLLAKDTKRFLSITLVLLVFSYTAAITIPDIXXFFQFLGSTSAVCLAFIFPGV 632 A+P + +F H ++ PI E PS M ++AL IYF LFGYL F + + S++L + + + + V+L ++L P+++F R + + FS P R ITL L + AI +PDI F +G++++ CL FIFPG+ Sbjct: 252 ALPTMAFSFLCHTSILPIYCELQSPSKKRMQNVTNTAIALSFLIYFISALFGYLTFYDKVESELLKGYSKYLSHDVVVMT---VKLCILFAVLLTVPLIHFPARKAVTMMFFSNFPF---SWIRHFLITLALNIIIVLLAIYVPDIRNVFGVVGASTSTCLIFIFPGL 413
BLAST of CK935016 vs. ExPASy Swiss-Prot
Match: S38A7_DANRE (Putative sodium-coupled neutral amino acid transporter 7 OS=Danio rerio GN=slc38a7 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.066e-14 Identity = 56/199 (28.14%), Postives = 96/199 (48.24%), Query Frame = 3 Query: 57 VWEGKSKTPKLLPQLDNHVSFFDLFTAVPVIVTAFTFHFNVHPIGFEFDKPS--DMITAVRISLALCAAIYFSVGLFGYLLFGESIMSDILINFDQSSGSAISSLLNDLVRLSYALHLMLVFPMLNFSLRANIDELLFSQK-----PLLAKDTKRFLSITLVLLVFSYTAAITIPDIXXFFQFLGSTSAVCLAFIFPGV 632 +W K +P ++P S+ D+F A+P I F H + P+ KP V IS+ +C +Y G+ G+L FG S+ D+L+++ S A++ + R + ++ +P+L+F RA ++ L K +AK+ +R + TLV + A+ IPDI +G +A C F+FPG+ Sbjct: 222 IWPSKDVSPGIIPV--RPASWTDVFNAMPTICFGFQCHVSSVPVFNSMKKPEIRPWWGVVTISMIICLFVYTGTGVCGFLSFGSSVSQDVLMSY-PSDDVAVA-----IARAFIIICVVTSYPILHFCGRAVLEGLWLRFKGEEVETDVAKERRRRILQTLVWFCLTLILALFIPDIGRVISLIGGLAA-CFIFVFPGL 411
BLAST of CK935016 vs. ExPASy Swiss-Prot
Match: S38A6_RAT (Probable sodium-coupled neutral amino acid transporter 6 OS=Rattus norvegicus GN=Slc38a6 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 8.920e-14 Identity = 58/197 (29.44%), Postives = 96/197 (48.73%), Query Frame = 3 Query: 48 IYAVWEGKSKTPKLLPQLDNHVSFFDLFTAVPVIVTAFTFHFNVHPIGFEFDKPSD--MITAVRISLALCAAIYFSVGLFGYLLFGESIMSDILINFDQSSGSAISSLLNDLVRLSYALHLMLVFPMLNFSLRANIDELLFSQKPLLAKDTKRFLSITLVLLVFSYTAAITIPDIXXFFQFLGSTSAVCLAFIFPGV 632 I AV++ + T P+L H S ++ A+P + +F H +V PI E PS M ++AL +YF LFGYL F + + S++L + + + + V+L ++L P+++F R + +LFS P R TL L + AI +PDI F +G++++ CL F+FPG+ Sbjct: 226 INAVFQISNATDDCKPKLF-HFSKESVY-AIPTMAFSFLCHTSVLPIYCELRSPSKKRMQNVTNTAIALSFLVYFVSALFGYLTFYDKVESELLQGYSKYLPHDAAVMA---VKLCILFAVLLTVPLIHFPARKALMMILFSNYPF---SWIRHSLTTLALNIIIVLLAIYVPDIRNVFGVVGASTSTCLIFVFPGL 414
BLAST of CK935016 vs. ExPASy Swiss-Prot
Match: S38A6_DANRE (Probable sodium-coupled neutral amino acid transporter 6 OS=Danio rerio GN=slc38a6 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 8.920e-14 Identity = 54/170 (31.76%), Postives = 87/170 (51.18%), Query Frame = 3 Query: 135 AVPVIVTAFTFHFNVHPIGFEFDKPSD--MITAVRISLALCAAIYFSVGLFGYLLFGESIMSDILINFDQSSGSAISSLLNDLVRLSYALHLMLVFPMLNFSLRANIDELLFSQKPL--LAKDTKRFLSITLVLLVFSYTAAITIPDIXXFFQFLGSTSAVCLAFIFPGV 632 AVP + +F H V PI E +P+ M A +S+ L +Y LFGYL F + S++L+ ++ I + VRL+ L ++L P+++F R + L ++ L+ F +TLVLL+ AI +PDI F +GST++ CL F++PG+ Sbjct: 244 AVPTMAFSFLCHTAVFPIYCELHRPTKRRMQRATNVSIFLSFVVYLISALFGYLTFYSHVGSELLLAYNTYLPRDILVMS---VRLAILLAVLLTVPLIHFPARKAVLMLCRGEREFSWLSHTLSCFFILTLVLLL-----AIFVPDIKNVFGVVGSTTSTCLLFVYPGM 405
BLAST of CK935016 vs. ExPASy Swiss-Prot
Match: S38A5_MOUSE (Sodium-coupled neutral amino acid transporter 5 OS=Mus musculus GN=Slc38a5 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.987e-13 Identity = 54/167 (32.34%), Postives = 81/167 (48.50%), Query Frame = 3 Query: 138 VPVIVTAFTFHFNVHPIGFEFDKPSD--MITAVRISLALCAAIYFSVGLFGYLLFGESIMSDILINFDQSSGSAISSLLNDLVRLSYALHLMLVFPMLNFSLRANIDELLFSQKPLLAKDTKRFLSITLVLLVFSYTAAITIPDIXXFFQFLGSTSAVCLAFIFPGV 632 VP++ AF H V PI E +P+ M +S+ +Y FGYL F ++ +++L + Q +L VRL+ L + L P++ F +R + +LLF K A R ++I L+LL+ I +P I F F+GSTSA L FI P V Sbjct: 269 VPIMAFAFVCHPEVLPIYTELCRPTQRRMQAVANMSIGAMFIMYGLTATFGYLTFYSTVKAEMLEMYTQED------MLILCVRLAVLLAVTLTVPVVLFPIRRALQQLLFPSK---AFSWLRHVAIALILLILVNILVICVPTIRDIFGFIGSTSAPSLIFILPSV 426
BLAST of CK935016 vs. ExPASy Swiss-Prot
Match: S38A5_HUMAN (Sodium-coupled neutral amino acid transporter 5 OS=Homo sapiens GN=SLC38A5 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.987e-13 Identity = 54/167 (32.34%), Postives = 79/167 (47.31%), Query Frame = 3 Query: 138 VPVIVTAFTFHFNVHPIGFEFDKPSD--MITAVRISLALCAAIYFSVGLFGYLLFGESIMSDILINFDQSSGSAISSLLNDLVRLSYALHLMLVFPMLNFSLRANIDELLFSQKPLLAKDTKRFLSITLVLLVFSYTAAITIPDIXXFFQFLGSTSAVCLAFIFPGV 632 VP++ AF H V PI E +PS M +S+ +Y FGYL F S+ +++L + Q + VRL+ L + L P++ F +R + +LLF K A R ++I L+LLV I +P I F +GSTSA L FI P + Sbjct: 262 VPIMAFAFVCHPEVLPIYTELCRPSKRRMQAVANVSIGAMFCMYGLTATFGYLTFYSSVKAEMLHMYSQKDPLILC------VRLAVLLAVTLTVPVVLFPIRRALQQLLFPGK---AFSWPRHVAIALILLVLVNVLVICVPTIRDIFGVIGSTSAPSLIFILPSI 419
BLAST of CK935016 vs. ExPASy Swiss-Prot
Match: S38A5_RAT (Sodium-coupled neutral amino acid transporter 5 OS=Rattus norvegicus GN=Slc38a5 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.390e-13 Identity = 55/167 (32.93%), Postives = 80/167 (47.90%), Query Frame = 3 Query: 138 VPVIVTAFTFHFNVHPIGFEFDKPSD--MITAVRISLALCAAIYFSVGLFGYLLFGESIMSDILINFDQSSGSAISSLLNDLVRLSYALHLMLVFPMLNFSLRANIDELLFSQKPLLAKDTKRFLSITLVLLVFSYTAAITIPDIXXFFQFLGSTSAVCLAFIFPGV 632 VP++ AF H V PI E P+ M +S+ +Y FGYL F ++ +++L + Q LL VRL+ L + L P++ F +R + +LLF K A R ++I L+LL+ I +P I F F+GSTSA L FI P V Sbjct: 269 VPIMAFAFVCHPEVLPIYTELCCPTQRRMQAVANMSIGAMFIMYGLTATFGYLTFYSTVKAEMLEMYTQED------LLILCVRLAVLLAVTLTVPVVLFPIRRALQQLLFPSK---AFSWPRHVAIALILLILVNILVICVPTIRDIFGFIGSTSAPSLIFILPSV 426
BLAST of CK935016 vs. ExPASy Swiss-Prot
Match: S38A2_CHICK (Sodium-coupled neutral amino acid transporter 2 OS=Gallus gallus GN=SLC38A2 PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 4.427e-13 Identity = 52/166 (31.33%), Postives = 84/166 (50.60%), Query Frame = 3 Query: 135 AVPVIVTAFTFHFNVHPIGFEFDKPSD--MITAVRISLALCAAIYFSVGLFGYLLFGESIMSDILINFDQSSGSAISSLLNDLVRLSYALHLMLVFPMLNFSLRANIDELLFSQKPLLAKDTKRFLSITLVLLVFSYTAAITIPDIXXFFQFLGSTSAVCLAFIFP 626 AVP++ +F H + PI E S M+ +S +Y LFGYL F + S++L + G+ I L+ VRL+ + + L P++ F +R+++ +LL++ K R SIT+VLL F+ I +P I F F+G+++A L FI P Sbjct: 290 AVPILTFSFVCHPAILPIYEELKSRSRKRMMNVSYVSFFAMFLMYLLAALFGYLTFYGRVESELLHTYSAFLGADILLLI---VRLAVLMAVTLTVPVVIFPIRSSVTQLLWAGKEF---SWWRHCSITVVLLAFTNVLVIFVPTIRDIFGFIGASAAAMLIFILP 449 The following BLAST results are available for this feature:
BLAST of CK935016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935016 ID=CK935016; Name=CK935016; organism=Citrus sinensis; type=EST; length=640bpback to top |