CK935017
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK935017 vs. ExPASy Swiss-Prot
Match: TL17_ARATH (Thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=At5g53490 PE=1 SV=2) HSP 1 Score: 303.523 bits (776), Expect = 8.391e-82 Identity = 156/241 (64.73%), Postives = 187/241 (77.59%), Query Frame = 2 Query: 44 MATISVPLSHNTSSRQHLSTIRHRFHFPRSSHSPLTIACSA---RRNSSESKEGFSHLKELKGVACGFLAAWAVTAASPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKSNLKGKSLAAALMSDAKFDGADMSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKAHLEGAVFKNTVLSGSTFNEAQLQDAVFEDTIIGYVDLQKLCTNTTLSPDGRDELGCR 757 MA++ V + N S S + R S +T+ CSA R N K+ LKEL +AC L A +T ASPVIAANQRLPPLSTEPDRCE+AFVGNTIGQANGVYDKP+DLRFCDYTN+++NLKGK+L+AALM AKFDGADM+EVVMSKAYAV ASFKGV+F+NAV+DRVNFGK++L+GAVF+NTVLSGSTF EA L+D VFEDTIIGY+DLQK+C N +++ +GR LGCR Sbjct: 1 MASLPVQFTRNQISSPFFSV-----NLRREPRSLVTVHCSAGENRENGEGVKKSLFPLKELGSIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIGQANGVYDKPLDLRFCDYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKGVNFTNAVIDRVNFGKSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRNESINEEGRLVLGCR 236
BLAST of CK935017 vs. ExPASy Swiss-Prot
Match: TL225_ARATH (Thylakoid lumenal protein At1g12250, chloroplastic OS=Arabidopsis thaliana GN=At1g12250 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.339e-13 Identity = 69/245 (28.16%), Postives = 110/245 (44.90%), Query Frame = 2 Query: 59 VPLSHNTSSRQHLSTIRHRFHFPR--------SSHSPLTIACSARRNSSESKEGFSHLKELKGVACGFLAAWAVTAASPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKSNLKGKSLAAALMSDAKFDGADMSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKAHLEGAVFKNTVLSGSTFNEAQLQDAVFEDTIIGYVDLQKLC-----TNTTLSPDGRDELGC 754 +P+ SR S R +HF R SS S L I ++SS ++EG E + + A+ VIA++ +P ++ E +R E G G + DL ++NE N + + +A M ++ F G+ + + KA A A+F G D S+ ++DR+ +A+L AV +VL+ S A+++ A F D +I + Q LC TN D R LGC Sbjct: 9 LPMKSLDISRSSSSVSRSPYHFQRYLLRRLQLSSRSNLEI-----KDSSNTREGCCSSAESNT----WKRILSAAMAAAVIASSSGVPAMA-ELNRFEADTRGE-FGIGSAAQYGSADLSKTVHSNE--NFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKSLGC 240 The following BLAST results are available for this feature:
BLAST of CK935017 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK935017 ID=CK935017; Name=CK935017; organism=Citrus sinensis; type=EST; length=782bpback to top |