CK935064

Overview
NameCK935064
Unique NameCK935064
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length444
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig867 contig Csv1_Contig867:309..751. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CK935064 vs. ExPASy Swiss-Prot
Match: Y2309_ARATH (Uncharacterized protein At2g23090 OS=Arabidopsis thaliana GN=At2g23090 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.518e-23
Identity = 49/61 (80.33%), Postives = 53/61 (86.89%), Query Frame = 3 
Query:   21 KKQKAANGGSQLETNKKAMSIPCKVCMQTFMCTTSXXKCREHAEAKHPKSDIYACFPHLKK 203
            +K KAA  GSQLE NKKAMSI CKVCMQTF+CTTS  KCREHAEAKHPK+D+ ACFPHLKK
Sbjct:   18 EKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK 78
The following BLAST results are available for this feature:
BLAST of CK935064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y2309_ARATH1.518e-2380.33Uncharacterized protein At2g23090 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004222_D03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IF_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935064 ID=CK935064; Name=CK935064; organism=Citrus sinensis; type=EST; length=444bp
GGGCTCCCGAATCTCGAAAAAAGAAACAAAAAGCTGCCAACGGAGGAAGC
CAATTGGAAACAAACAAGAAAGCTATGTCGATCCCGTGCAAGGTGTGTAT
GCAGACATTCATGTGCACGACTTCAGNNNTGAAGTGCAGGGAGCATGCTG
AAGCAAAGCACCCAAAGAGTGACATTTATGCCTGCTTCCCCCATCTTAAG
AAGTGATAAGAGTTTGGGGGAAAATATTATATGCCAGATATAGTTGGGGA
CATAATCTTCCTTATTGTATAGTGTTCCCTTTTCCAGCAATACCTCAGAT
TAAGTGTGTTGCGGTTTGTAGAATCTGTTTGTTGCGGTTTGTAGAATCTG
TGTGTGCATGTGAAGAGGGACTGGTTCATTGTTCTGTTTTAATGGAATTT
GTGTAATGTTATGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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