CK935092

Overview
NameCK935092
Unique NameCK935092
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length783
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4015 contig Csv1_Contig4015:194..976. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CK935092 vs. ExPASy Swiss-Prot
Match: UGPI5_ARATH (Uncharacterized GPI-anchored protein At1g27950 OS=Arabidopsis thaliana GN=At1g27950 PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.158e-30
Identity = 62/100 (62.00%), Postives = 78/100 (78.00%), Query Frame = 1 
Query:  139 ECGEYLQKTMACLDFARGKITTPSKECCSAVKGIKDDDPKCLCYIIKEANGGEGDMVKNLGVQVPKLLQLPSACQLKNASTSLCPKLLGLSPSSPDAAIF 438
            EC +  QK   CLDFA GK T PSK+CC AV+ IK+ DPKCLC++I++A  G G  +K+LGVQ  KL+QLP++CQL NAS + CPKLLG+SPSSPDAA+F
Sbjct:   34 ECNQDFQKVTLCLDFATGKATIPSKKCCDAVEDIKERDPKCLCFVIQQAKTG-GQALKDLGVQEDKLIQLPTSCQLHNASITNCPKLLGISPSSPDAAVF 132
The following BLAST results are available for this feature:
BLAST of CK935092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
UGPI5_ARATH1.158e-3062.00Uncharacterized GPI-anchored protein At1g27950 OS=... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004222_A11 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IF_A11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935092 ID=CK935092; Name=CK935092; organism=Citrus sinensis; type=EST; length=783bp
GGGGATCGCAGCAACAAAGGAAAGAGGAAAGAGGGCAAAAGAGAGAAGAT
GATGGGAATGAAAAAAGGGTTTCTATGTGGCATATTGTTTGGCTTCATAG
CGTTAAGGGTTGTAACGGCTGATGACGCTACAAATAAGGAGTGTGGTGAG
TATTTGCAGAAGACGATGGCCTGTTTGGATTTTGCAAGGGGGAAGATTAC
GACTCCGTCCAAAGAATGTTGCAGCGCTGTGAAGGGTATAAAAGACGATG
ATCCAAAGTGTTTGTGTTATATCATCAAGGAGGCTAATGGCGGTGAAGGC
GATATGGTTAAGAACTTGGGCGTGCAGGTGCCTAAGCTGCTTCAGCTTCC
ATCCGCTTGCCAGTTGAAAAATGCCAGCACCAGTCTCTGCCCAAAGCTTC
TAGGGCTATCTCCTAGCTCTCCAGATGCTGCAATATTCACAAATACTTCT
TCATCGGCAACTCCAACTACAGCAGCGGCCGCGGGAACATCAGCATCTGA
CGGATCGTCTGGGAACATGCACGGACCATACCTCCTTGGACCGACGGTGA
TCATAGCAATGTCTATCTTTTTCTATGTGTTCCCAACTGGGTCTGCTTCT
TTATGTGCTTAACAACAGCACATATGGCGTCGAAAATTGAGAATTCGCTC
AAGTAGTGAAGCAGCTTCTTGTTATTCCTTTCTTGCAATGTTGTTTGGAC
TTTATGACTATGTTCTTTGTCTTCCTGACTCTATGACATTGTGCATCCAT
GGTGTTTTAGAAAAAAAAAAAAAAAAAAAAAAA
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