CK935096

Overview
NameCK935096
Unique NameCK935096
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length642
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6949 contig Csv1_Contig6949:28..670. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935096 vs. ExPASy Swiss-Prot
Match: INO1_CITPA (Inositol-3-phosphate synthase OS=Citrus paradisi PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 5.565e-64
Identity = 116/123 (94.31%), Postives = 118/123 (95.93%), Query Frame = 3
Query:  273 MFIENFKVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVRPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTLASTXXVGSYNGEEIYA 641
            MFIENFKVESPNVKYTD+EIHSVYDYETTELVHENRNGTYQWIV+PKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGI WATKDTVQQANYFGSLT AS   VGSYNGEEIYA
Sbjct:    1 MFIENFKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGICWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYA 123          
BLAST of CK935096 vs. ExPASy Swiss-Prot
Match: INO1_TOBAC (Inositol-3-phosphate synthase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 1.516e-61
Identity = 111/123 (90.24%), Postives = 117/123 (95.12%), Query Frame = 3
Query:  273 MFIENFKVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVRPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTLASTXXVGSYNGEEIYA 641
            MFIENFKVESPNVKYT++EIHSVYDY+TTELVHE +NGTYQW V+PKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKD VQQANYFGSLT AST  VGS+NGEEIYA
Sbjct:    1 MFIENFKVESPNVKYTESEIHSVYDYQTTELVHEEKNGTYQWTVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDKVQQANYFGSLTQASTIRVGSFNGEEIYA 123          
BLAST of CK935096 vs. ExPASy Swiss-Prot
Match: INO1_NICPA (Inositol-3-phosphate synthase OS=Nicotiana paniculata GN=INPS1 PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 3.376e-61
Identity = 110/123 (89.43%), Postives = 117/123 (95.12%), Query Frame = 3
Query:  273 MFIENFKVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVRPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTLASTXXVGSYNGEEIYA 641
            MFIENFKVESPNVKYT++EIHSVYDY+TTELVH+ +NGTYQW V+PKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKD VQQANYFGSLT AST  VGS+NGEEIYA
Sbjct:    1 MFIENFKVESPNVKYTESEIHSVYDYQTTELVHDEKNGTYQWTVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDKVQQANYFGSLTQASTIRVGSFNGEEIYA 123          
BLAST of CK935096 vs. ExPASy Swiss-Prot
Match: INO1_SESIN (Inositol-3-phosphate synthase OS=Sesamum indicum PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 9.824e-61
Identity = 110/123 (89.43%), Postives = 117/123 (95.12%), Query Frame = 3
Query:  273 MFIENFKVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVRPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTLASTXXVGSYNGEEIYA 641
            MFIE+FKVESPNVKYT+ EIHSVY+YETTELVHE+RNGTYQWIV+PKTVKYEFKTD HVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKD VQQANYFGSLT AS+  VGS+NGEEIYA
Sbjct:    1 MFIESFKVESPNVKYTEGEIHSVYNYETTELVHESRNGTYQWIVKPKTVKYEFKTDTHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDKVQQANYFGSLTQASSIRVGSFNGEEIYA 123          
BLAST of CK935096 vs. ExPASy Swiss-Prot
Match: INO1_WHEAT (Inositol-3-phosphate synthase OS=Triticum aestivum GN=MIPS PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 2.858e-60
Identity = 108/123 (87.80%), Postives = 116/123 (94.31%), Query Frame = 3
Query:  273 MFIENFKVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVRPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTLASTXXVGSYNGEEIYA 641
            MFIE+FKVESPNVKYT+NEIHSVYDYETTE+VHENRNGTYQW+V+PKTVKY+FKTD  VPKLGVMLVGWGGNNGSTLT GVIAN+EGISWATKD VQQANYFGSLT AS+  VGSYNGEEIYA
Sbjct:    1 MFIESFKVESPNVKYTENEIHSVYDYETTEVVHENRNGTYQWVVKPKTVKYDFKTDTRVPKLGVMLVGWGGNNGSTLTAGVIANKEGISWATKDKVQQANYFGSLTQASSIRVGSYNGEEIYA 123          
BLAST of CK935096 vs. ExPASy Swiss-Prot
Match: INO2_ARATH (Inositol-3-phosphate synthase isozyme 2 OS=Arabidopsis thaliana GN=At2g22240 PE=2 SV=2)

HSP 1 Score: 228.794 bits (582), Expect = 1.853e-59
Identity = 107/123 (86.99%), Postives = 116/123 (94.31%), Query Frame = 3
Query:  273 MFIENFKVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVRPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTLASTXXVGSYNGEEIYA 641
            MFIE+FKVESPNVKYT+NEI+SVYDYETTE+VHENRNGTYQW+V+PKTVKY+FKTD  VPKLGVMLVGWGGNNGSTLT GVIAN+EGISWATKD VQQANYFGSLT AS+  VGSYNGEEIYA
Sbjct:    1 MFIESFKVESPNVKYTENEINSVYDYETTEVVHENRNGTYQWVVKPKTVKYDFKTDTRVPKLGVMLVGWGGNNGSTLTAGVIANKEGISWATKDKVQQANYFGSLTQASSIRVGSYNGEEIYA 123          
BLAST of CK935096 vs. ExPASy Swiss-Prot
Match: INO3_ARATH (Probable inositol-3-phosphate synthase isozyme 3 OS=Arabidopsis thaliana GN=At5g10170 PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 4.127e-59
Identity = 106/123 (86.18%), Postives = 115/123 (93.50%), Query Frame = 3
Query:  273 MFIENFKVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVRPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTLASTXXVGSYNGEEIYA 641
            MFIE+FKVESPNVKYT+NEIHSVYDY+TTELVHEN+NG +QW V+PKTVKYEFKTD HVPKLGVMLVGWGGNNGSTLT GVIANREGISWATK+ VQQANYFGSLT AS+  VGS+NGEEIYA
Sbjct:    1 MFIESFKVESPNVKYTENEIHSVYDYQTTELVHENKNGAFQWTVKPKTVKYEFKTDTHVPKLGVMLVGWGGNNGSTLTAGVIANREGISWATKEKVQQANYFGSLTQASSIRVGSFNGEEIYA 123          
BLAST of CK935096 vs. ExPASy Swiss-Prot
Match: INO1_BRANA (Inositol-3-phosphate synthase OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 222.246 bits (565), Expect = 1.734e-57
Identity = 104/123 (84.55%), Postives = 113/123 (91.87%), Query Frame = 3
Query:  273 MFIENFKVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVRPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTLASTXXVGSYNGEEIYA 641
            MFIE+FKVESPNVKYT+NEIHSVYDYETTE+VHEN NG YQWIV+PK VKY+FKTD  VPKLGVMLVGWGGNNGSTLT GVIAN+EGISWATKD VQQANYFGSLT AS+  VGS+NGEE+YA
Sbjct:    1 MFIESFKVESPNVKYTENEIHSVYDYETTEVVHENVNGAYQWIVKPKVVKYDFKTDTRVPKLGVMLVGWGGNNGSTLTAGVIANKEGISWATKDKVQQANYFGSLTQASSIRVGSFNGEEMYA 123          
BLAST of CK935096 vs. ExPASy Swiss-Prot
Match: INO1_PHAVU (Inositol-3-phosphate synthase OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 5.578e-56
Identity = 105/124 (84.68%), Postives = 114/124 (91.94%), Query Frame = 3
Query:  273 MFIENFKVESPNVKYTDNEIHSVYDYETTELVHENR-NGTYQWIVRPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTLASTXXVGSYNGEEIYA 641
            MFIE+FKVESPNVKYT+NEIHSVYDYETTE+VHE   NGTYQWIV+PKTVKY+FKTD+ VPKLGVMLVG GGNNGSTLT GVIAN+EGISWATKD VQQANYFGSLT AS+  VGS+NGEEIYA
Sbjct:    1 MFIESFKVESPNVKYTENEIHSVYDYETTEVVHEKTVNGTYQWIVKPKTVKYDFKTDIRVPKLGVMLVGLGGNNGSTLTAGVIANKEGISWATKDKVQQANYFGSLTQASSIRVGSFNGEEIYA 124          
BLAST of CK935096 vs. ExPASy Swiss-Prot
Match: INO1_ARATH (Inositol-3-phosphate synthase isozyme 1 OS=Arabidopsis thaliana GN=At4g39800 PE=2 SV=3)

HSP 1 Score: 217.238 bits (552), Expect = 5.578e-56
Identity = 105/124 (84.68%), Postives = 114/124 (91.94%), Query Frame = 3
Query:  273 MFIENFKVESPNVKYTDNEIHSVYDYETTELVHENR-NGTYQWIVRPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTLASTXXVGSYNGEEIYA 641
            MFIE+FKVESPNVKYT+NEIHSVYDYETTE+VHE   NGTYQWIV+PKTVKY+FKTD+ VPKLGVMLVG GGNNGSTLT GVIAN+EGISWATKD VQQANYFGSLT AS+  VGS+NGEEIYA
Sbjct:    1 MFIESFKVESPNVKYTENEIHSVYDYETTEVVHEKTVNGTYQWIVKPKTVKYDFKTDIRVPKLGVMLVGLGGNNGSTLTAGVIANKEGISWATKDKVQQANYFGSLTQASSIRVGSFNGEEIYA 124          
The following BLAST results are available for this feature:
BLAST of CK935096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO1_CITPA5.565e-6494.31Inositol-3-phosphate synthase OS=Citrus paradisi P... [more]
INO1_TOBAC1.516e-6190.24Inositol-3-phosphate synthase OS=Nicotiana tabacum... [more]
INO1_NICPA3.376e-6189.43Inositol-3-phosphate synthase OS=Nicotiana panicul... [more]
INO1_SESIN9.824e-6189.43Inositol-3-phosphate synthase OS=Sesamum indicum P... [more]
INO1_WHEAT2.858e-6087.80Inositol-3-phosphate synthase OS=Triticum aestivum... [more]
INO2_ARATH1.853e-5986.99Inositol-3-phosphate synthase isozyme 2 OS=Arabido... [more]
INO3_ARATH4.127e-5986.18Probable inositol-3-phosphate synthase isozyme 3 O... [more]
INO1_BRANA1.734e-5784.55Inositol-3-phosphate synthase OS=Brassica napus PE... [more]
INO1_PHAVU5.578e-5684.68Inositol-3-phosphate synthase OS=Phaseolus vulgari... [more]
INO1_ARATH5.578e-5684.68Inositol-3-phosphate synthase isozyme 1 OS=Arabido... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004177_H06 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DA0001_IIF_H06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935096 ID=CK935096; Name=CK935096; organism=Citrus sinensis; type=EST; length=642bp
GGGGATGCACAGATTACCAAGCTAGTTTCGAAAGTTAAAAGAGTGTTGAG
TCGAGTGGGAAGTGAGAATTGAGAAGGAGAGTCGAGTTCGGAGACAGCAA
GACGAAACAGCTCTTCTTCCAATAAATCTCAAAGCATTTGTTTGGTTTTA
TTTAAAGCAATTTTCTCAGCAAACTCTTCTTCTAATAAATTTTAAAGCAT
TTGTTTGGTTTTTATTTAAAGCAATTTTCTCAGCGAAGTTTTCAATTTTT
TCTCTAAAATTTTCCTGGGAAAATGTTTATCGAAAATTTCAAGGTTGAGA
GCCCAAATGTGAAGTACACAGATAATGAGATTCACTCTGTGTACGATTAT
GAAACCACTGAGCTTGTTCATGAGAACAGAAATGGCACTTATCAGTGGAT
TGTCAGGCCCAAAACTGTCAAATATGAGTTCAAAACCGATGTTCATGTCC
CTAAACTTGGGGTTATGCTTGTGGGTTGGGGTGGAAACAACGGCTCAACT
CTCACGGGTGGTGTTATCGCGAATCGAGAGGGAATCTCCTGGGCCACAAA
GGACACAGTGCAACAAGCCAATTATTTTGGTTCACTTACCCTAGCATCAA
CAATNNNAGTTGGGTCGTACAATGGAGAGGAGATTTATGCTC
back to top