CK935104

Overview
NameCK935104
Unique NameCK935104
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935104 vs. ExPASy Swiss-Prot
Match: LEC2_CLALU (Agglutinin-2 OS=Cladrastis lutea PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.517e-13
Identity = 78/270 (28.89%), Postives = 118/270 (43.70%), Query Frame = 2
Query:   38 MIFLLLLSVFLRGASSSILSEDTPISFSFPSFAKDSCDNKTLICYG--AIESSG-ALSITPGPPPNLPIR-KVGRVLYGKPLSLQRSFID------TTITIKISRHQNYTDRAGDGMTFIFASDKNGPSAKGVGEYLGLQSSPGDKFPPL----AVELDTCLNKNLXXXXXXXXXXXXXXXESNPVSSLLDV--DLKSGRAIQVRIYYNPDFGQLSIYAAYSGETLAK--VIEKPINLSDIIPTPVYVGFTAATGDFLESHEVINWTFNS 793
            + F+ L  + L   +SS       +SF+F +F  D  D   LI  G   I S G +L +T       P+R  VGR LY  PL L  S  +      TT T  +S   + T+  GDG+ F  A  +        G  LGL S        L    AVE DT +N N                + N + S   V    ++G     +I YN D  +LS+ ++Y      +   +   ++L   +P  V VGF+ +TG ++++H +++WTFNS
Sbjct:   20 LAFITLFLMLLNRVNSS-----DSLSFTFDNFRPDQRD---LILQGDAKISSGGDSLQLTKTDTSGKPVRGSVGRALYYTPLHLWDSSTNRLASFQTTFTFVLS---SPTNNPGDGIAFFIAPPETTIPPGSSGGLLGLFSPDNALNNSLNQIVAVEFDTFVNNN------WDPSHRHIGIDVNTIKSSATVRWQRENGSLATAQISYNSDTKKLSVVSSYPNTQANEDYTVSYDVDLKTELPEWVRVGFSGSTGGYVQNHNILSWTFNS 272          
BLAST of CK935104 vs. ExPASy Swiss-Prot
Match: LEC2_CYTSC (2-acetamido-2-deoxy-D-galactose-binding seed lectin 2 OS=Cytisus scoparius PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.664e-12
Identity = 72/245 (29.39%), Postives = 102/245 (41.63%), Query Frame = 2
Query:  110 ISFSFPSFAKDSCDNKTLICYGAIESSGALSITPGPPPNLPIRKVGRVLYGKPLSL-------QRSFIDTTITIKISRHQNYTDRAGDGMTFIFASDKNGPSAKGVGEYLGL---QSSPGDKFPPLAVELDTCLNKNLXXXXXXXXXXXXXXXESNPVSSLLDVDLKSGRAIQVRIYYNPDFGQLSIYAAY-SGETLAK---VIEKPINLSDIIPTPVYVGFTAATG---DFLESHEVINWTFNS 793
            +SFSF  F  D   N  L     I  +G L +T           +GR LY  P+ +       + SF  T  +  IS   N +  A DG+ F  A     P +   G YLGL    SS       +AVE DT  N                  +S  VSS      K+G    V I Y P    L     Y SG+T  K   +I   ++L   +P  V +GF+A TG   +++E+H++++W+F S
Sbjct:    4 LSFSFTKFKTDQ-KNLILQRDALITPTGKLQLTTVENGKPAAYSLGRALYSTPIHIWDKSTGDEASFA-TFFSFVISDAPNPSTAATDGLAFFLAPADTQPQS--AGGYLGLFEKDSSYNSSNQIVAVEFDTYYNSAWDPQTNPHIGIDVNTIKSKKVSSW---GFKNGNVATVLITYQPSSKSLVASLVYPSGQTSDKTSYIISANVDLKATVPEWVRIGFSATTGQTDNYIETHDILSWSFKS 241          
BLAST of CK935104 vs. ExPASy Swiss-Prot
Match: LECS_SOPJA (Seed lectin OS=Sophora japonica PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.930e-11
Identity = 77/273 (28.21%), Postives = 116/273 (42.49%), Query Frame = 2
Query:   17 VALAEQKMIFLLLLSVFLRGASSSILSEDTPISFSFPSFAKDSCDNKTLICYG--AIESSGALSITPGPPPNLPI-RKVGRVLYGKPLSLQRSFIDTTITIKISRH----QNYTDRAGDGMTFIFASDKNGPSAKGVGEYLGLQSSPG--DKFPPLAVELDTCLNKNLXXXXXXXXXXXXXXXESNPVSSLLDVDL--KSGRAIQVRIYYNPDFGQLSIYAAYSGETLAKVIEKPINLSDIIPTPVYVGFTAATG---DFLESHEVINWTFNS 793
            V LA     FLLLL+   +  S+ ILS      FSFP FA +  D   L+  G   + S G L +T      +PI    GR LY  P+ +         +   S           ++ DG+ F  A   N     G G +LGL  S G    +  +AV+ DT +N                  + N ++S   V    ++G    V I Y      L++   Y     + ++   ++L  I+P  V VGFTAATG    ++E+H+V++W+F S
Sbjct:   19 VVLAISITFFLLLLN---KVNSAEILS------FSFPKFASNQED---LLLQGDALVSSKGELQLTT-VENGVPIWNSTGRALYYAPVHIWDKSTGRVASFATSFSFVVKAPVASKSADGIAFFLAPPNNQIQGPG-GGHLGLFHSSGYNSSYQIIAVDFDTHINA-------WDPNTRHIGIDVNSINSTKTVTWGWQNGEVANVLISYQAATETLTVSLTYPSSQTSYILSAAVDLKSILPEWVRVGFTAATGLTTQYVETHDVLSWSFTS 270          
BLAST of CK935104 vs. ExPASy Swiss-Prot
Match: LEC_ERYCG (Lectin OS=Erythrina crista-galli PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.334e-11
Identity = 70/241 (29.05%), Postives = 102/241 (42.32%), Query Frame = 2
Query:  110 ISFSFPSFAKDSCDNKTLICYGAIESSGALSITPGPPPNLPI-RKVGRVLYGKPLSLQRSFIDTTITIK----ISRHQNYT-DRAGDGMTFIFASDKNGPSAKGVGEYLGL--QSSPGDKFPPLAVELDTCLNKNLXXXXXXXXXXXXXXXESNPVSSLLD--VDLKSGRAIQVRIYYNPDFGQLSIYAAYSGETLAKVIEKPINLSDIIPTPVYVGFTAATG---DFLESHEVINWTFNS 793
            ISFSF  F   + DN TL     I  SG L +T      +P     GR LY KP+ +  S   T  + +     S  Q YT     DG+ F     K+ P A+G G YLG+   S   + +  LAVE DT  N                  + N + S+      L +G+   V I Y+     L +   Y        I + +++  ++P  V VG + ATG   D  E+H+V +W+F +
Sbjct:    4 ISFSFSEFEPGN-DNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHMWDSTTGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKP-AQGYG-YLGVFNNSKQDNSYQTLAVEFDTFSNP------WDPPQVPHIGIDVNSIRSIKTQPFQLDNGQVANVVIKYDAPSKILHVVLVYPSSGAIYTIAEIVDVKQVLPDWVDVGLSGATGAQRDAAETHDVYSWSFQA 235          
The following BLAST results are available for this feature:
BLAST of CK935104 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
LEC2_CLALU3.517e-1328.89Agglutinin-2 OS=Cladrastis lutea PE=1 SV=1[more]
LEC2_CYTSC8.664e-1229.392-acetamido-2-deoxy-D-galactose-binding seed lecti... [more]
LECS_SOPJA1.930e-1128.21Seed lectin OS=Sophora japonica PE=2 SV=1[more]
LEC_ERYCG7.334e-1129.05Lectin OS=Erythrina crista-galli PE=1 SV=1[more]
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Properties
Property NameValue
Genbank descriptionCGF1004177_G06 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DA0001_IIF_G06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935104 ID=CK935104; Name=CK935104; organism=Citrus sinensis; type=EST; length=889bp
GGGGGCCATTCAATAAGTAGCCCTCGCAGAACAAAAAATGATTTTCCTAC
TACTCCTCTCAGTTTTTCTTCGCGGAGCTTCTTCATCAATCCTTTCCGAA
GACACACCTATTAGCTTCTCATTTCCCTCATTCGCCAAAGACAGTTGTGA
CAATAAGACCCTCATTTGCTACGGAGCGATTGAAAGTTCCGGCGCCTTAA
GCATCACACCAGGCCCTCCACCAAACCTGCCGATCAGAAAGGTTGGACGG
GTTTTATACGGCAAGCCTCTGAGTTTACAGCGATCTTTTATTGATACCAC
CATCACCATTAAGATCTCACGCCATCAGAATTACACTGATCGTGCCGGAG
ATGGCATGACGTTCATTTTTGCAAGCGATAAAAACGGTCCATCAGCAAAG
GGCGTCGGCGAATATCTTGGACTGCAGTCTTCACCAGGCGATAAATTTCC
TCCATTAGCCGTGGAGCTGGACACATGCCTGAACAAGAACCTGAATGATC
CAGATGATAACCATATTGGCATCGACATAAACGGAATCGAATCAAATCCA
GTTAGTAGTCTGCTTGACGTTGATCTCAAAAGTGGACGAGCAATCCAGGT
TCGAATTTATTACAATCCAGACTTTGGACAACTCTCTATTTATGCGGCAT
ATTCGGGGGAAACACTTGCGAAGGTGATTGAAAAACCCATTAACCTGTCA
GATATAATTCCAACGCCCGTCTATGTTGGATTCACAGCAGCTACGGGGGA
CTTTTTAGAAAGCCATGAGGTTATAAATTGGACCTTCAACTCGTTCCCAG
TGCCGCCTTCTCTCAAGGAGAAAAACCTGGTGATGCCAATATAATTCTAA
ACCGTCCTTGAAAAAACATGTCACATAAATTATAATCAA
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