CK935143
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK935143 vs. ExPASy Swiss-Prot
Match: LIN1_DROME (LIN1-like protein OS=Drosophila melanogaster GN=CG5198 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.673e-12 Identity = 58/205 (28.29%), Postives = 101/205 (49.27%), Query Frame = 2 Query: 296 NGNDISAAEVTYEGDENFVDDGIQIDPFNLDKEREEGYFDAQGNFVEYVNENEIKDAWLDSLEVDQRYVGTAVIDNKVIEAQEDKDNDHELSSEELG------VIKRRIANILEPGETVTQALRR----------LKGTSNKKAKMSAETKRVFDQLTEDAMRLMEENGEYNVYHENRETFEREAEGYERLXXSKXK-ADAYDMF 859 N +DI E EG V+D +++ PFN+ +E EEG+FD G++ + E E KD WLD+++ +V N A++++++ E +E +G + ++ ++PGETV L+R L+ KKA + + QLTE A ++ + G ++Y + E+ +A+ + SK K AD DM+ Sbjct: 39 NDSDIEGGE---EGVAK-VEDDVKVTPFNMKEELEEGHFDKDGHY-HWNKETEAKDNWLDNID----WVKIGTQKNAFDPAKDEENSSDEEKNEPVGKAFNLSMNLMKMVEFMKPGETVKMTLQRLGKQRPVLTTLQRIKQKKAGIVDPKTQEISQLTELANEILSKTGNMDIYQDTYESI--KAKIADLPGTSKPKVADDIDMY 232
BLAST of CK935143 vs. ExPASy Swiss-Prot
Match: CD2B2_MOUSE (CD2 antigen cytoplasmic tail-binding protein 2 OS=Mus musculus GN=Cd2bp2 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.823e-11 Identity = 74/259 (28.57%), Postives = 115/259 (44.40%), Query Frame = 2 Query: 89 DEDSDEQPMQKRVRFPKGKKVKP------------GKEAVDGVKDDGDGPTGLKNPQLAAKERATHRNLMTFELCSEESRGNGNDISAAEVTYEGDENFVDDGIQIDPFNLDKEREEGYFDAQGNFVEYVNEN-EIKDAWLDSLEVDQRYVGTAVIDNKVIEAQEDKDNDHELSSEELGVIKRRIANILEPGETVTQALRRL------KGTSNKKAKMSAETKRVFDQLTEDAMRLMEENGEYNVYHENRETFEREAEG 808 DED +++ + PK K V P GK ++D ++D D K LA SE+ G AA + EG G++I PFNL +E EEG+FDA GN+ ++N++ +I+D+WLD+ +D + D + E++D+ + +++ + +L P ETV ALRRL KG SN K + + D+L+ A + M G VY E RE +G Sbjct: 13 DEDGEDE-----ISVPKKKLVDPVAAAGGPGSRFKGKHSLDSDEEDDDEEGSSKYDILA----------------SEDVEGQ----EAATLPSEG-------GVRITPFNLQEEMEEGHFDADGNY--FLNQDAQIRDSWLDN--IDWVRIKERPPDKHQVSDSEEEDSLGQTPMSAQALLE-GLLELLLPRETVAGALRRLGARGGGKG-SNSKGTGRPNSPQRLDRLSGLADQ-MVARGNLGVYQETRERLAMRLKG 232
BLAST of CK935143 vs. ExPASy Swiss-Prot
Match: CD2B2_HUMAN (CD2 antigen cytoplasmic tail-binding protein 2 OS=Homo sapiens GN=CD2BP2 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.823e-11 Identity = 73/260 (28.08%), Postives = 113/260 (43.46%), Query Frame = 2 Query: 86 DDEDSDEQPMQKRVRFPKGKKVKP------------GKEAVDGVKDDGDGPTGLKNPQLAAKERATHRNLMTFELCSEESRGNGNDISAAEVTYEGDENFVDDGIQIDPFNLDKEREEGYFDAQGNFVEYVNEN-EIKDAWLDSLE---VDQRYVGTAVIDNKVIEAQEDKDNDHELSSEELGVIKRRIANILEPGETVTQALRRL---KGTSNKKAKMSAETKRVFDQLTEDAMRLMEENGEYNVYHENRETFEREAEG 808 D+ED DE + PK K V P GK ++D +++ D G + L SE+ G AA + EG G++I PFNL +E EEG+FDA GN+ ++N + +I+D+WLD+++ + +R G + +ED +S++ L + +L P ETV ALRRL G +K + + D+L+ A + M G VY E RE +G Sbjct: 13 DEEDEDE------IIVPKKKLVDPVAGSGGPGSRFKGKHSLDSDEEEDDDDGGSSKYDI---------------LASEDVEGQ----EAATLPSEG-------GVRITPFNLQEEMEEGHFDADGNY--FLNRDAQIRDSWLDNIDWVKIRERPPGQRQASD---SEEEDSLGQTSMSAQAL---LEGLLELLLPRETVAGALRRLGARGGGKGRKGPGQPSSPQRLDRLSGLADQ-MVARGNLGVYQETRERLAMRLKG 231 The following BLAST results are available for this feature:
BLAST of CK935143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK935143 ID=CK935143; Name=CK935143; organism=Citrus sinensis; type=EST; length=861bpback to top |