CK935172
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935172 vs. ExPASy Swiss-Prot
Match: PATL6_ARATH (Patellin-6 OS=Arabidopsis thaliana GN=PATL6 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 5.167e-36 Identity = 72/93 (77.42%), Postives = 83/93 (89.25%), Query Frame = 1 Query: 4 VNIQIEGIEAGATITWDIVVGGWDLEYSAEFVPNAEGSYTIAVEKPRKISPSEEAIRNSFTSKEAGKLVLSVDNSSSRRRKVAAYRYIVRKSS 282 VNIQIEGIE GATITWDIVVGGWDLEYSAEFVPNAE SY I VEKP+K+ ++EA+ NSFT+ EAGKL+LSVDN+ SR++KVAAYRY VRKS+ Sbjct: 314 VNIQIEGIEGGATITWDIVVGGWDLEYSAEFVPNAEESYAIVVEKPKKMKATDEAVCNSFTTVEAGKLILSVDNTLSRKKKVAAYRYTVRKST 406
BLAST of CK935172 vs. ExPASy Swiss-Prot
Match: PATL4_ARATH (Patellin-4 OS=Arabidopsis thaliana GN=PATL4 PE=1 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 2.848e-18 Identity = 43/91 (47.25%), Postives = 61/91 (67.03%), Query Frame = 1 Query: 10 IQIEGIEAGATITWDIVVGGWDLEYSAEFVPNAEGSYTIAVEKPRKISPSEEAIRNSFTSKEAGKLVLSVDNSSSRRRKVAAYRYIVRKSS 282 I+I E T+ WDI V GW++ Y EFVP EG+YT+ V+K +K+ +E IRNSF + +AGK+VL+VDN S +++KV YRY + S Sbjct: 449 IEIPAPETEGTLVWDIAVLGWEVNYKEEFVPTEEGAYTVIVQKVKKMGANEGPIRNSFKNSQAGKIVLTVDNVSGKKKKV-LYRYRTKTES 538
BLAST of CK935172 vs. ExPASy Swiss-Prot
Match: PATL3_ARATH (Patellin-3 OS=Arabidopsis thaliana GN=PATL3 PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 3.259e-14 Identity = 34/78 (43.59%), Postives = 57/78 (73.08%), Query Frame = 1 Query: 43 ITWDIVVGGWDLEYSAEFVPNAEGSYTIAVEKPRKISPSEE-AIRNSFTSKEAGKLVLSVDNSSSRRRKVAAYRYIVR 273 + W+I V GW++ Y AEFVP + +YT+ ++KPRK+ PS+E + +SF E GK++L+VDN +S+++K+ YR+ V+ Sbjct: 412 LVWEIRVTGWEVSYKAEFVPEEKDAYTVVIQKPRKMRPSDEPVLTHSFKVNELGKVLLTVDNPTSKKKKL-VYRFNVK 488
BLAST of CK935172 vs. ExPASy Swiss-Prot
Match: PATL5_ARATH (Patellin-5 OS=Arabidopsis thaliana GN=PATL5 PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 5.203e-12 Identity = 33/79 (41.77%), Postives = 53/79 (67.09%), Query Frame = 1 Query: 40 TITWDIVVGGWDLEYSAEFVPNAEGSYTIAVEKPRKISPSEE-AIRNSFTSKEAGKLVLSVDNSSSRRRKVAAYRYIVR 273 TI W+I V GW++ Y AEFVP + YT+ ++KPRK++ E + +SF E G+++L+VDN +S +K+ YR+ V+ Sbjct: 586 TIVWEIRVVGWEVSYGAEFVPENKEGYTVIIQKPRKMTAKNELVVSHSFKVGEVGRILLTVDNPTS-TKKMLIYRFKVK 663
BLAST of CK935172 vs. ExPASy Swiss-Prot
Match: PATL2_ARATH (Patellin-2 OS=Arabidopsis thaliana GN=PATL2 PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 8.875e-12 Identity = 31/73 (42.47%), Postives = 53/73 (72.60%), Query Frame = 1 Query: 34 GATITWDIVVGGWDLEYSAEFVPNAEGSYTIAVEKPRKISPSEE-AIRNSFTSKEAGKLVLSVDNSSSRRRKV 249 G+T++W++ V G D+ Y A+F P+ E SYT+ V K RK+ ++E I +SF + EAGK+V+++DN + +++KV Sbjct: 603 GSTLSWELRVLGADVSYGAQFEPSNEASYTVIVSKNRKVGLTDEPVITDSFKASEAGKVVITIDNQTFKKKKV 675
BLAST of CK935172 vs. ExPASy Swiss-Prot
Match: PATL1_ARATH (Patellin-1 OS=Arabidopsis thaliana GN=PATL1 PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 8.875e-12 Identity = 37/86 (43.02%), Postives = 56/86 (65.12%), Query Frame = 1 Query: 10 IQIEGIEAGATITWDIVVGGWDLEYSAEFVPNAEGSYTIAVEKPRKI-SPSEEAIRNSFTSKEAGKLVLSVDNSSSRRRKVAAYRY 264 I++ EA T++W++ V G D+ Y A+F P EGSY + V K RKI S E I +SF E GK+V+++DN +S+++KV YR+ Sbjct: 487 IELPASEA-CTLSWELRVLGADVSYGAQFEPTTEGSYAVIVSKTRKIGSTDEPVITDSFKVGEPGKIVITIDNQTSKKKKV-LYRF 570 The following BLAST results are available for this feature:
BLAST of CK935172 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK935172 ID=CK935172; Name=CK935172; organism=Citrus sinensis; type=EST; length=330bpback to top |