CK935177
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK935177 vs. ExPASy Swiss-Prot
Match: CCS_RAT (Copper chaperone for superoxide dismutase OS=Rattus norvegicus GN=Ccs PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.410e-23 Identity = 64/149 (42.95%), Postives = 86/149 (57.72%), Query Frame = 2 Query: 245 TSQGDQGLPELLTEYMVDMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGSSPLKTMTEALEQTGRKARLVGQGVPEDFLVSAAVAEFKGP-DVFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP 688 + GD G L E+ V M C+ CVDAV + L+ GV+NVEV L NQ+V + + P + + LE TGR+A L G G + + AAVA +G V GVVR Q++ EL IE GL PG HG ++++GDLTK S G +NP Sbjct: 3 SKSGDGGTMCAL-EFTVQMSCQSCVDAVHKTLKGAAGVQNVEVQLENQMVLVQTTLPSQEVQALLESTGRQAVLKGMGSSQLKNLGAAVAIMEGSGTVQGVVRFLQLSSELCLIEGTIDGLEPGLHGLHVHQYGDLTKDCSSCGDHFNP 150
BLAST of CK935177 vs. ExPASy Swiss-Prot
Match: CCS_MOUSE (Copper chaperone for superoxide dismutase OS=Mus musculus GN=Ccs PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.156e-22 Identity = 62/149 (41.61%), Postives = 87/149 (58.39%), Query Frame = 2 Query: 245 TSQGDQGLPELLTEYMVDMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGSSPLKTMTEALEQTGRKARLVGQGVPEDFLVSAAVAEFKG-PDVFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP 688 + GD G L E+ V M C+ CVDAV + L+ V GV+NV+V L NQ+V + + P + + LE TGR+A L G G + + AAVA +G + GVVR Q++ EL IE GL PG HG ++++GDLT+ S G +NP Sbjct: 3 SKSGDGGTVCAL-EFAVQMSCQSCVDAVHKTLKGVAGVQNVDVQLENQMVLVQTTLPSQEVQALLESTGRQAVLKGMGSSQLQNLGAAVAILEGCGSIQGVVRFLQLSSELCLIEGTIDGLEPGLHGLHVHQYGDLTRDCNSCGDHFNP 150
BLAST of CK935177 vs. ExPASy Swiss-Prot
Match: CCS_HUMAN (Copper chaperone for superoxide dismutase OS=Homo sapiens GN=CCS PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.192e-22 Identity = 63/149 (42.28%), Postives = 86/149 (57.72%), Query Frame = 2 Query: 245 TSQGDQGLPELLTEYMVDMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGSSPLKTMTEALEQTGRKARLVGQGVPEDFLVSAAVAEFKGP-DVFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP 688 + G+QG L E+ V M C+ CVDAV++ LQ V GV++VEV L +Q+V + + P + + LE TGR+A L G G + + AAVA GP V GVVR Q+ E IE GL PG HG ++++GDLT S G +NP Sbjct: 3 SDSGNQGTLCTL-EFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVLKGMGSGQLQNLGAAVAILGGPGTVQGVVRFLQLTPERCLIEGTIDGLEPGLHGLHVHQYGDLTNNCNSCGNHFNP 150
BLAST of CK935177 vs. ExPASy Swiss-Prot
Match: CCS_PIG (Copper chaperone for superoxide dismutase OS=Sus scrofa GN=CCS PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.070e-21 Identity = 59/138 (42.75%), Postives = 79/138 (57.25%), Query Frame = 2 Query: 278 LTEYMVDMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGSSPLKTMTEALEQTGRKARLVGQGVPEDFLVSAAVAEFKGP-DVFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP 688 + E+ V M C+ CVDAV + LQ V G+++VEV L NQ+V + + P + + LE TGR+A L G G + AAVA G V GVVR Q+ E IE GL PG HG +++FGDLT+ S G +NP Sbjct: 13 MLEFAVQMTCQSCVDAVSRSLQGVAGIQSVEVQLENQMVLVQTTLPSQVVQALLEDTGRQAVLKGMGSGRWQNLEAAVAILGGSGPVQGVVRFLQLTPERCLIEGTIDGLKPGLHGLHVHQFGDLTRNCNSCGDHFNP 150
BLAST of CK935177 vs. ExPASy Swiss-Prot
Match: CCS1_ASHGO (Superoxide dismutase 1 copper chaperone OS=Ashbya gossypii GN=CCS1 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.287e-14 Identity = 51/139 (36.69%), Postives = 73/139 (52.52%), Query Frame = 2 Query: 287 YMVDMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGSSPLKTMTEALEQTGRKARLVGQGVPEDFLVSAAVAEFK-----GPDVFGVVRLAQVNMELARIEANFSGL-SPGKHGWSINEFGDLTKGAVSTGRVYN 685 Y V M C C + + L+ V GV+ V DL Q+V + G +P ++ +AL TGR A L G G P+ SAAVA + GP V G+VR QV + +GL P ++ SI GD+++GA STG ++ Sbjct: 12 YAVPMHCGDCTGEISRALRAVPGVQEVTPDLERQLVAVRGIAPPSSIVQALAATGRDAILRGSGEPD----SAAVAILESASAGGPPVRGLVRAVQVAPNKTLFDITLNGLPGPAQYYASIRASGDVSRGAASTGPAWH 146
BLAST of CK935177 vs. ExPASy Swiss-Prot
Match: CCS1_DEBHA (Superoxide dismutase 1 copper chaperone OS=Debaryomyces hansenii GN=CCS1 PE=3 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 1.072e-13 Identity = 45/141 (31.91%), Postives = 75/141 (53.19%), Query Frame = 2 Query: 287 YMVDMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGSSPLKTMTEALEQTGRKARLVGQGVPEDFLVSAAVAEFKGPD-------VFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP 688 + V M+C+ CVD+V L+++ G+ ++DL + +V GS P + +A++ TG+ A + G G P SAAV + D V G+ R+ V ++ +GL G + SI + G+L+KGA+STG + P Sbjct: 9 FAVPMECQSCVDSVSSSLKSLNGISKYDIDLKSNLVTTEGSVPPSEIVKAIQSTGKDAIIRGTGAPN----SAAVCILESFDPKDIQQPVKGLARIVSVGANDLVVDLTVNGLPQGVYYPSIRKSGNLSKGALSTGECFYP 145
BLAST of CK935177 vs. ExPASy Swiss-Prot
Match: CCS1_YARLI (Superoxide dismutase 1 copper chaperone OS=Yarrowia lipolytica GN=CCS1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 9.079e-13 Identity = 41/137 (29.93%), Postives = 73/137 (53.28%), Query Frame = 2 Query: 281 TEYMVDMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGSSPLKTMTEALEQTGRKARLVGQGVPED---FLVSAAVAEFKGPDVFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVY 682 T + V ++CE C D+VKQ L V G+++V+ L +Q++ + G+S + +A++ G+ A + G G P ++ + E + + G+ R+ V+ LA I+ +GL G + SI GD++ S G VY Sbjct: 5 TTFAVPLECESCCDSVKQALANVQGIESVDCKLVDQLISVTGTSAPSQIVKAVQNIGKDAIVRGTGQPNSAAVCILESHAPEDQAQPIKGLARIVSVSKTLALIDITLNGLPKGTYYPSIRTSGDISDAPQSLGGVY 141
BLAST of CK935177 vs. ExPASy Swiss-Prot
Match: CCS1_KLULA (Superoxide dismutase 1 copper chaperone OS=Kluyveromyces lactis GN=CCS1 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.506e-12 Identity = 42/133 (31.58%), Postives = 69/133 (51.88%), Query Frame = 2 Query: 287 YMVDMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGSSPLKTMTEALEQTGRKARLVGQGVPEDFLVSAAVAEFKGP---DVFGVVRLAQVNMELARIEANFSGL-SPGKHGWSINEFGDLTKGAVSTG 673 Y V+M CE C + +++ L+ V G+KNV D+ + ++ + G + + AL+ GR + G G P VS GP V G+VR+ +V + + N +G+ PG + S+ GDL++G STG Sbjct: 13 YAVEMHCESCTNDIQKCLKDVNGIKNVTFDIKDNLMNVEGHAAPSAIINALKNCGRDGIIRGTGKPNSAAVSILGQYTTGPFENTVKGLVRIVEVAQKKTFFDINLNGVEKPGLYYASVRASGDLSEGVKSTG 145 The following BLAST results are available for this feature:
BLAST of CK935177 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK935177 ID=CK935177; Name=CK935177; organism=Citrus sinensis; type=EST; length=825bpback to top |