CK935246

Overview
NameCK935246
Unique NameCK935246
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length683
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6400 contig Csv1_Contig6400:14..691. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935246 vs. ExPASy Swiss-Prot
Match: GPT2_ARATH (Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=GPT2 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.548e-46
Identity = 87/109 (79.82%), Postives = 95/109 (87.16%), Query Frame = 2
Query:    5 SLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRXXXXXXXXXXFHTPVQPVNALGAAIAILGTFIYSQAKQ 331
            SL+ILTPF+IAVE PQMWAAGWQ A++Q+GPNFVWWV AQS+FYHLYNQVSYMSLDQISPLTFSIGNTMKR          FHTP+QPVNALGAAIAI GTF+YSQAKQ
Sbjct:  280 SLVILTPFSIAVEVPQMWAAGWQNAVSQVGPNFVWWVVAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVASIIIFHTPIQPVNALGAAIAIFGTFLYSQAKQ 388          
BLAST of CK935246 vs. ExPASy Swiss-Prot
Match: GPT1_ARATH (Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.494e-45
Identity = 86/108 (79.63%), Postives = 91/108 (84.26%), Query Frame = 2
Query:    5 SLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRXXXXXXXXXXFHTPVQPVNALGAAIAILGTFIYSQAK 328
            SLLILTPFAIAVEGPQMW  GWQ A+A +GP FVWWV AQS+FYHLYNQVSYMSLDQISPLTFS+GNTMKR          F TPVQPVNALGAAIAILGTF+YSQAK
Sbjct:  280 SLLILTPFAIAVEGPQMWVDGWQTALATVGPQFVWWVVAQSVFYHLYNQVSYMSLDQISPLTFSVGNTMKRISVIVSSIIIFRTPVQPVNALGAAIAILGTFLYSQAK 387          
BLAST of CK935246 vs. ExPASy Swiss-Prot
Match: TPT_FLAPR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria pringlei GN=TPT PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.013e-13
Identity = 42/112 (37.50%), Postives = 65/112 (58.04%), Query Frame = 2
Query:    5 SLLILTPFAIAVEGPQMWAAGWQKAIAQIGP----NFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRXXXXXXXXXXFHTPVQPVNALGAAIAILGTFIYSQAK 328
            SLL   P AI +EGPQ+   G+  AIA++G     + ++WV    +FYHLYNQ++  +L++++PLT ++GN +KR          F   +    A+G +IAI G  +YS  K
Sbjct:  287 SLLFCIPPAIILEGPQLLKHGFSDAIAKVGMTKFISDLFWVG---MFYHLYNQLAINTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTAIGTSIAIAGVAVYSLIK 395          
BLAST of CK935246 vs. ExPASy Swiss-Prot
Match: TPT_SPIOL (Triose phosphate/phosphate translocator, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.727e-13
Identity = 42/112 (37.50%), Postives = 65/112 (58.04%), Query Frame = 2
Query:    5 SLLILTPFAIAVEGPQMWAAGWQKAIAQIG-PNFV---WWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRXXXXXXXXXXFHTPVQPVNALGAAIAILGTFIYSQAK 328
            +L +  P AI VEGPQ+   G+  AIA++G   F+   +WV    +FYHLYNQ++  +L++++PLT ++GN +KR          F   +    A+G +IAI G  +YS  K
Sbjct:  283 ALFVCLPPAIIVEGPQLMKHGFNDAIAKVGLTKFISDLFWVG---MFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIIAFGNKISTQTAIGTSIAIAGVALYSLIK 391          
BLAST of CK935246 vs. ExPASy Swiss-Prot
Match: TPT_FLATR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria trinervia GN=TPT PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.947e-13
Identity = 41/112 (36.61%), Postives = 64/112 (57.14%), Query Frame = 2
Query:    5 SLLILTPFAIAVEGPQMWAAGWQKAIAQIGP----NFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRXXXXXXXXXXFHTPVQPVNALGAAIAILGTFIYSQAK 328
            +LL   P A+  EGPQ+   G+  AIA++G     + ++WV    +FYHLYNQ++  +L++++PLT ++GN +KR          F   +    A+G +IAI G  IYS  K
Sbjct:  286 ALLFCIPPAVLFEGPQLLKHGFNDAIAKVGMIKFISDLFWVG---MFYHLYNQIATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTAIGTSIAIAGVAIYSLIK 394          
BLAST of CK935246 vs. ExPASy Swiss-Prot
Match: TPT_SOLTU (Triose phosphate/phosphate translocator, chloroplastic OS=Solanum tuberosum GN=TPT PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.026e-13
Identity = 41/109 (37.61%), Postives = 61/109 (55.96%), Query Frame = 2
Query:    5 SLLILTPFAIAVEGPQMWAAGWQKAIAQIG-PNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRXXXXXXXXXXFHTPVQPVNALGAAIAILGTFIYSQAK 328
            +L+   P AI +EGPQ+   G+  AIA++G   FV  +    +FYHLYNQV+  +L++++PLT ++GN +KR          F   +     +G  IAI G  IYS  K
Sbjct:  293 ALIFCLPPAIFIEGPQLLQHGFNDAIAKVGLTKFVTDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIVIFGNKISTQTGIGTCIAIAGVAIYSFIK 401          
BLAST of CK935246 vs. ExPASy Swiss-Prot
Match: TPT1_BRAOB (Triose phosphate/phosphate translocator, chloroplastic OS=Brassica oleracea var. botrytis GN=TPT PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.573e-13
Identity = 40/112 (35.71%), Postives = 63/112 (56.25%), Query Frame = 2
Query:    5 SLLILTPFAIAVEGPQMWAAGWQKAIAQIGP----NFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRXXXXXXXXXXFHTPVQPVNALGAAIAILGTFIYSQAK 328
            +L +  P AI VEGPQ+   G+  AIA++G     + ++WV    +FYHLYNQ++  +L++++PLT ++GN +KR          F   +     +G  IAI G  +YS  K
Sbjct:  286 ALFVCLPPAIIVEGPQLLKHGFNDAIAKVGMTKFISDLFWVG---MFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVIFGNKISTQTGIGTGIAIAGVALYSVIK 394          
BLAST of CK935246 vs. ExPASy Swiss-Prot
Match: TPT_MAIZE (Triose phosphate/phosphate translocator, chloroplastic OS=Zea mays GN=TPT PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.462e-12
Identity = 37/109 (33.94%), Postives = 62/109 (56.88%), Query Frame = 2
Query:    5 SLLILTPFAIAVEGPQMWAAGWQKAIAQIG-PNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRXXXXXXXXXXFHTPVQPVNALGAAIAILGTFIYSQAK 328
            +L++  P A+  EGP++   G+  AIA++G   FV  +    +FYHLYNQ++  +L++++PLT ++GN +KR          F   +     +G +IAI G  +YS  K
Sbjct:  289 ALIVCIPPALIFEGPKLMQHGFSDAIAKVGLTKFVSDLFLVGLFYHLYNQIATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTGIGTSIAIAGVAMYSYIK 397          
BLAST of CK935246 vs. ExPASy Swiss-Prot
Match: TPT_PEA (Triose phosphate/phosphate translocator, chloroplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.910e-12
Identity = 38/112 (33.93%), Postives = 63/112 (56.25%), Query Frame = 2
Query:    5 SLLILTPFAIAVEGPQMWAAGWQKAIAQIG----PNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRXXXXXXXXXXFHTPVQPVNALGAAIAILGTFIYSQAK 328
            +L++  P A+ +EGP +   G+  AIA++G     + ++WV    +FYHLYNQV+  +L++++PLT ++GN +KR          F   +     +G  IAI G  +YS  K
Sbjct:  281 ALIVCIPPALIIEGPTLLKTGFNDAIAKVGLVKFVSDLFWVG---MFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIIIFGNKISTQTGIGTGIAIAGVALYSFIK 389          
BLAST of CK935246 vs. ExPASy Swiss-Prot
Match: TPT2_BRAOB (Triose phosphate/phosphate translocator, non-green plastid, chloroplastic OS=Brassica oleracea var. botrytis GN=NGTPT PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.910e-12
Identity = 40/109 (36.70%), Postives = 59/109 (54.13%), Query Frame = 2
Query:    5 SLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRXXXXXXXXXXFHTPVQPVNALGAAIAILGTFIYSQAKQ 331
            SL ++ P     EG +   +  Q A   +   +   + A ++ +H Y QVSYM L ++SP+T S+GN +KR          F TPV PVNA G  IA+ G F+YS+ K+
Sbjct:  287 SLFLMAPVTFFSEGIKFTPSYIQSAGVNVQQIYTKSLIA-ALCFHAYQQVSYMILARVSPVTHSVGNCVKRVVVIVSSVIFFKTPVSPVNAFGTGIALAGVFLYSRVKR 394          
The following BLAST results are available for this feature:
BLAST of CK935246 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
GPT2_ARATH1.548e-4679.82Glucose-6-phosphate/phosphate translocator 2, chlo... [more]
GPT1_ARATH8.494e-4579.63Glucose-6-phosphate/phosphate translocator 1, chlo... [more]
TPT_FLAPR1.013e-1337.50Triose phosphate/phosphate translocator, chloropla... [more]
TPT_SPIOL1.727e-1337.50Triose phosphate/phosphate translocator, chloropla... [more]
TPT_FLATR2.947e-1336.61Triose phosphate/phosphate translocator, chloropla... [more]
TPT_SOLTU5.026e-1337.61Triose phosphate/phosphate translocator, chloropla... [more]
TPT1_BRAOB8.573e-1335.71Triose phosphate/phosphate translocator, chloropla... [more]
TPT_MAIZE1.462e-1233.94Triose phosphate/phosphate translocator, chloropla... [more]
TPT_PEA1.910e-1233.93Triose phosphate/phosphate translocator, chloropla... [more]
TPT2_BRAOB1.910e-1236.70Triose phosphate/phosphate translocator, non-green... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004564_B06 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIIF_B06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935246 ID=CK935246; Name=CK935246; organism=Citrus sinensis; type=EST; length=683bp
GGGGTCTCTTTTGATTCTCACACCATTTGCAATTGCTGTGGAGGGCCCTC
AGATGTGGGCTGCTGGCTGGCAAAAGGCTATTGCTCAAATTGGTCCCAAC
TTCGTGTGGTGGGTAGCGGCACAGAGTATCTTCTATCACTTGTACAACCA
AGTTTCATACATGTCTCTCGATCAAATTTCTCCATTGACATTCAGCATTG
GCAACACAATGAAGCGAATCTCTGTCATAGTCTCCTCCATCATCATCTTC
CACACGCCAGTTCAACCCGTCAATGCTCTTGGAGCCGCCATTGCAATACT
CGGCACCTTCATCTATTCACAGGCAAAGCAGTGAAGGTGTGAAGGATTTT
GAGGTGGTTTTGCCGCATAGTCTATGAGTTCTGCTGGAACTATTCGCATC
GAAGTCTGACAGAAGATTGATTGAAAAAAAAAAAGACGCGGCTACAGTGG
ACGGAATGATGCTTTTATTCCTTGTAATCAAGAGTAGTATCTATATTATT
CTCATGATGCTTGCAGCCAGATAAGTGTACAAGGTTTTTTTTCACCCGAG
AGCAGATTGTGGGTTAATGCCTTTGTTGTAAATAAGAATAAATGAGTTAC
TGAGCTGTAATGATGTTAATAGAGTTATTTATTCATTCATTTATTTCCCT
TCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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