CK935276

Overview
NameCK935276
Unique NameCK935276
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935276 vs. ExPASy Swiss-Prot
Match: ACSA1_PSEAE (Acetyl-coenzyme A synthetase 1 OS=Pseudomonas aeruginosa GN=acsA1 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.710e-14
Identity = 58/198 (29.29%), Postives = 93/198 (46.97%), Query Frame = 1
Query:  190 PKLLGRAYKDPITSFRLFQKSTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKV 780
            P+ + R + D  T   ++Q+S V +P+ +W    + I  + +   K      D       W     LN++  CL    H  +  + VAI+W  D  D +    +TY++L EQV   ANAL      +GD + I MPM   AV+  LA    G +   +   F+   +A R+   K+K + T D  +RGG++ PL + V
Sbjct:   11 PEAVARTFTDEATYKTMYQQSVV-NPDGFWREQAQRIDWI-KPFEKVKQTSFDDHHVDIKWFADGTLNVSHNCL--DRHLAERGDQVAIIWEGD--DPADHQEITYRQLHEQVCKFANALRGQDVHRGDVVTIYMPMIPEAVVAMLACTRIGAIHSVVFGGFSPEALAGRIIDCKSKVVITADEGVRGGKRTPLKANV 202          
BLAST of CK935276 vs. ExPASy Swiss-Prot
Match: ACSA_PSESM (Acetyl-coenzyme A synthetase OS=Pseudomonas syringae pv. tomato GN=acsA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.916e-14
Identity = 59/200 (29.50%), Postives = 93/200 (46.50%), Query Frame = 1
Query:  190 PKLLGRAYKDPITSFRLFQKSTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGT--WLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKV 780
            P++      D  T   ++Q+S V +P+ +W    + +  +    P  ++ +T    H     W     LN+A  CL    H  +  +T+AI+W  D  D S    +TY+EL E+V   ANAL      +GD + I MPM   AV+  LA    G +   +   F+   +A R+    +K + T D  LRGG+K  L + V
Sbjct:   11 PEVAATTLTDEATYKAMYQQSVV-NPDGFWREQAQRLDWI---KPFSVVKQTSFDDHRVDIKWFADGTLNVAYNCL--DRHLAERGDTIAIIWEGD--DPSEHREITYRELHEEVCKFANALRGQDVHRGDVVTIYMPMIPEAVVAMLACARIGAIHSVVFGGFSPEALAGRIIDCSSKVVITADEGLRGGKKTALKANV 202          
BLAST of CK935276 vs. ExPASy Swiss-Prot
Match: ACSA1_PSEPK (Acetyl-coenzyme A synthetase 1 OS=Pseudomonas putida (strain KT2440) GN=acsA1 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.916e-14
Identity = 59/200 (29.50%), Postives = 93/200 (46.50%), Query Frame = 1
Query:  190 PKLLGRAYKDPITSFRLFQKSTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGT--WLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKV 780
            P++      D  T   ++Q+S + +P+ +W    + I  +    P   + +T    H     W     LN++  CL    H  +  + +AI+W  D  D S    +TY+EL EQV   ANAL      +GD + I MPM   AV+  LA    G +   +   F+   +A R+   K+K + T D  +RGGR+ PL + V
Sbjct:   11 PEVAATTLTDEATYKAMYQQSVI-NPDGFWREQAQRIDWI---KPFTKVKQTSFDDHHVDIKWFADGTLNVSSNCL--DRHLEERGDQLAIIWEGD--DPSEHRNITYRELHEQVCKFANALRGQDVHRGDVVTIYMPMIPEAVVAMLACARIGAIHSVVFGGFSPEALAGRIIDCKSKVVITADEGVRGGRRTPLKANV 202          
BLAST of CK935276 vs. ExPASy Swiss-Prot
Match: ACSA_PSEA6 (Acetyl-coenzyme A synthetase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=acsA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.809e-14
Identity = 60/189 (31.75%), Postives = 88/189 (46.56%), Query Frame = 1
Query:  220 PITSFRLFQKSTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGT-WLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKV 780
            P    R++ +S VE PE +W    K +  V  + P  I + +  + H    W     LN+A  C+    H  K  +  A +W  D  D  + +++TY  L ++V  +AN L  +   KGD +AI MPM  +AV   LA    G V   I   F+   IA R+   +AK + T D  LR G+  PL   V
Sbjct:   20 PADYARMYAES-VEQPEVFWAEQAKSLDWV--KTPTKIKNTSFDAHHVSIKWFEDGELNVAYNCI--DRHLAKRGHVTAFIWEGD--DPHSHDIITYHRLHDEVAKIANGLRKLGVGKGDRVAIYMPMIPQAVYAMLACARIGAVHTVIFGGFSPNAIADRVNNCQAKVLITADEGLRAGKHIPLKDNV 201          
BLAST of CK935276 vs. ExPASy Swiss-Prot
Match: ACSA_BRAJA (Acetyl-coenzyme A synthetase OS=Bradyrhizobium japonicum GN=acsA PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 4.974e-14
Identity = 61/194 (31.44%), Postives = 90/194 (46.39%), Query Frame = 1
Query:  205 RAYKDPITSFRLFQKSTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGT-WLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKV 780
            RA+ D      ++ +S +  P  +W    K I   + +AP  I + +    +    W    VLN+A  C+    H  K  N  AI+W  D  D S    +TYKEL ++V  +AN L T    KGD + I +PM   A    LA    G +   +   F+   +A R+   ++K I T D  LRGG+K PL + V
Sbjct:   15 RAWVDQAKYKEMYARS-ISDPNGFWAEQAKRID--WMKAPTKIENVSFAPGNVSIKWFEDGVLNVAHNCI--DRHLHKRANQTAIIWEGD--DPSQSRHITYKELHDEVCRMANILRTRNVKKGDRVTIYLPMIPEAAYAMLACARIGAIHSVVFAGFSPDSLAQRINDCQSKVIITADEGLRGGKKVPLKANV 201          
BLAST of CK935276 vs. ExPASy Swiss-Prot
Match: ACSA_SHEFN (Acetyl-coenzyme A synthetase OS=Shewanella frigidimarina (strain NCIMB 400) GN=acsA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.497e-14
Identity = 58/181 (32.04%), Postives = 86/181 (47.51%), Query Frame = 1
Query:  235 RLFQKSTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGT--WLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPL 768
            +++Q+S + +PE +W    K I  +    P   + +T    H  +  W     LN +  CL    H  +  + +AI+W  D  +E     +TY EL  QV   ANAL +   +KGD + I MPM   A +  LA    G V   +   F+   IA R+   K+K + T D  +RGGRK PL
Sbjct:   26 KMYQESII-NPEGFWREHGKRIDWI---KPYTKIKKTSFDDHNLSINWFYDGTLNASANCL--DRHLEEHGDKLAIIWEGDDANEQ--RKLTYAELHTQVCKFANALRSQGVNKGDIVTIYMPMVPEAAVAMLACARIGAVHSVVFGGFSPDSIAARVIDGKSKVLITADEGIRGGRKIPL 198          
BLAST of CK935276 vs. ExPASy Swiss-Prot
Match: ACSA2_PSEAE (Acetyl-coenzyme A synthetase 2 OS=Pseudomonas aeruginosa GN=acsA2 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.497e-14
Identity = 60/193 (31.09%), Postives = 88/193 (45.60%), Query Frame = 1
Query:  205 RAYKDPITSFRLFQKSTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKV 780
            RAY +     RL+++S VE+P+ +W    K     F+  P   +   D  K   TW  G  LN+A  C+    H  +    +AIVW  D   ESA   +TY++L   V  +AN L +    KGD + I MPM   A    LA    G V   +   F+   +  R+  +  + + T D  +RGG+  PL   V
Sbjct:   16 RAYLNDDDYQRLYRQS-VENPDEFWGEQAKAFLDWFK--PWHSVHHGDLRKGQATWFKGGQLNVAYNCI--DRHLERRGEQIAIVWEGDNPSESAH--ITYRKLHHNVCRLANVLKSRGVEKGDRVCIYMPMIPEAAYAMLACARIGAVHSVVFGGFSPDSLRDRILDADCRTVITADEGVRGGKYIPLKQNV 201          
BLAST of CK935276 vs. ExPASy Swiss-Prot
Match: ACSA_SHESH (Acetyl-coenzyme A synthetase OS=Shewanella sediminis (strain HAW-EB3) GN=acsA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.108e-13
Identity = 65/210 (30.95%), Postives = 95/210 (45.24%), Query Frame = 1
Query:  235 RLFQKSTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGT--WLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA-------XXLKAIVLPAIGNDV 834
            +++Q+S V +PE +W    + I  +    P   + +T    H  +  W     LN +  CL    H  K+ + VAI+W  D  D      +TY EL   V   ANAL +    +GD + + MPM   A ++ LA    G V   +   F+   IA+R+   K+K I T D  +RGGR  PL + +  A          K IVL   G DV
Sbjct:   26 KMYQESIV-NPEGFWREHGQRIDWI---KPYTKIKKTSFDDHNLSINWFYDGTLNASANCL--DRHLEKDSDKVAIIWEGD--DAKDQRTITYGELHSDVCKFANALRSQGVRRGDIVTVYMPMVPEAAVVMLACARIGAVHSVVFGGFSPDSIASRVIDGKSKVIITADEGVRGGRIIPLKANIDEALSHPDVDCVEKVIVLERTGGDV 227          
BLAST of CK935276 vs. ExPASy Swiss-Prot
Match: ACSA_SHEAM (Acetyl-coenzyme A synthetase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=acsA PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.447e-13
Identity = 60/185 (32.43%), Postives = 89/185 (48.11%), Query Frame = 1
Query:  235 RLFQKSTVEHPEAYWEIALKEISVV--FREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKV 780
            +++Q+S V +PE +W    K I  +  F +      D  D++ +   W     LN +  CL    H   + + VAI+W  D  D S    +TY+EL  +V   ANAL      +GD + I MPM V A +  LA    G V   +   F+   IA+R+   K+K + T D  +RGGRK PL   +
Sbjct:   26 KMYQES-VANPEGFWGEHAKRIDWIKPFTQVKDTSYD--DQNLYI-KWFHDGTLNASANCL--DRHLASKGDDVAIIWEGD--DASEQRKVTYRELHAEVCQFANALKAEGVKRGDVVTIYMPMVVEATVAMLACARIGAVHSVVFGGFSPDSIASRVIDGKSKLLITADEGVRGGRKIPLKGNI 202          
BLAST of CK935276 vs. ExPASy Swiss-Prot
Match: ACSA_PRB01 (Acetyl-coenzyme A synthetase OS=Gamma-proteobacterium EBAC31A08 GN=acsA PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.469e-13
Identity = 58/225 (25.78%), Postives = 97/225 (43.11%), Query Frame = 1
Query:  178 EIHGPKLLGRAYKDPITSFRLFQKSTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANAL-DTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKV----LGAXXLK-AIVLPAIGNDV 834
            +++ PK     Y      ++   K ++E P  +++    E      +      ++ + +K    W  G   NI+  C+    H   + N +A++W  D  D +    +TYKEL ++V   AN L D    KG  + I MPM +      LA    G V   +   F+   +  R+  +  K + T D  LRGG+K PL S V    LG   +K  +V+   G ++
Sbjct:    4 KLYSPKHSSNPYIKDFDEYKELYKQSIEDPSKFFKNLANENISWMEDFKTTFNNQFNNAK----WFEGGKTNISLNCI--DRHLENDPNKIALIWEGD--DPADSKELTYKELHDEVCKFANVLKDLGVQKGSRVCIYMPMIIETAFAMLACTRIGAVHSVVFGGFSPESLKDRILDADCKIVITADEGLRGGKKVPLKSNVDEALLGCPDVKNTLVIKRTGGEI 220          
The following BLAST results are available for this feature:
BLAST of CK935276 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
ACSA1_PSEAE1.710e-1429.29Acetyl-coenzyme A synthetase 1 OS=Pseudomonas aeru... [more]
ACSA_PSESM2.916e-1429.50Acetyl-coenzyme A synthetase OS=Pseudomonas syring... [more]
ACSA1_PSEPK2.916e-1429.50Acetyl-coenzyme A synthetase 1 OS=Pseudomonas puti... [more]
ACSA_PSEA63.809e-1431.75Acetyl-coenzyme A synthetase OS=Pseudoalteromonas ... [more]
ACSA_BRAJA4.974e-1431.44Acetyl-coenzyme A synthetase OS=Bradyrhizobium jap... [more]
ACSA_SHEFN6.497e-1432.04Acetyl-coenzyme A synthetase OS=Shewanella frigidi... [more]
ACSA2_PSEAE6.497e-1431.09Acetyl-coenzyme A synthetase 2 OS=Pseudomonas aeru... [more]
ACSA_SHESH1.108e-1330.95Acetyl-coenzyme A synthetase OS=Shewanella sedimin... [more]
ACSA_SHEAM1.447e-1332.43Acetyl-coenzyme A synthetase OS=Shewanella amazone... [more]
ACSA_PRB012.469e-1325.78Acetyl-coenzyme A synthetase OS=Gamma-proteobacter... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004563_H02 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIF_H02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935276 ID=CK935276; Name=CK935276; organism=Citrus sinensis; type=EST; length=845bp
GGGGATATTAAATGGGCTAGATTAGTACCACAAGAATGGCGAAATAGAGC
CAAACACTGTATGACTCAAAATAAAGATTAATCTTGGCATCAAAGTTTGA
ATCTTTCTCCTAACGGATACCTATGCTTTTCAAACATCAGAGATCAATCG
AAGCTTACTAACTTAGGAAATGCATTGGAAATTCATGGACCAAAGCTCCT
AGGGCGTGCGTACAAAGACCCCATAACAAGTTTTAGGCTCTTTCAGAAAT
CCACAGTTGAACATCCTGAGGCTTATTGGGAAATTGCTCTTAAAGAGATT
TCAGTTGTATTCCGCGAGGCCCCGAAATGTATTTTAGACAGAACTGACAA
ATCAAAGCATGGTGGAACATGGCTTCCAGGTTCAGTTTTAAATATTGCTG
AATGTTGTTTGCTACCCTCAAATCATCGGAGAAAAGAGGACAATACTGTG
GCTATTGTGTGGAGAGAGGATAGATGTGATGAATCTGCTGTTAACCTTAT
GACATACAAGGAACTCCGCGAACAAGTAATGTTGGTGGCTAATGCATTGG
ATACAATGTTCTCAAAGGGTGATGCAATTGCAATTGACATGCCTATGACA
GTCCGTGCAGTTATTATATATTTGGCTATTATACTAGCAGGATATGTTGT
AGTATCAATAGCTGACAGCTTTGCAGCTAGGGAGATTGCAACTCGTTTGC
GAGTGTCTAAAGCCAAGGGTATCTTTACTCAGGATTTTATTCTCAGAGGA
GGAAGAAAATTTCCTTTATACAGTAAAGTTCTAGGCGCNNNNNNTCTTAA
AGCTATTGTGCTCCCTGCGATCGGAAATGATGTAGGTATTCCATT
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