CK935288

Overview
NameCK935288
Unique NameCK935288
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length757
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10412 contig Csv1_Contig10412:32..788. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935288 vs. ExPASy Swiss-Prot
Match: TM111_DANRE (Transmembrane protein 111 OS=Danio rerio GN=tmem111 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.371e-49
Identity = 101/235 (42.98%), Postives = 155/235 (65.96%), Query Frame = 3
Query:   69 MAE-DLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNLRAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMM-QMSGFGF----DPSKSLGAEKDSLDIIQHEWA 755
            MAE +L+LD+ IR WV++P+  +  L+G++R++VS L++S +    + V + QV++R+R LR    +I  +SF  R+ YF N+E+G     K +         +DP+M  DMMK N++ ++P  L   W+N+ FSGFV  K+PFPLT RF+ MLQ GI+L ++D S+VSS SWYFLN+FGLR ++SLILG++N  D ++ M  QMSG       D +K+  AE ++L++  H+WA
Sbjct:    1 MAEPELLLDSNIRLWVVLPIVFITFLVGVIRHYVSILLQSDKKLTLEQVSDSQVLIRSRVLRENGKYIPKQSFLMRKFYFNNQEDGFFKKTKRKV--VPPSPMTDPSMLTDMMKGNVTNVLPMILIGGWINWTFSGFVTTKVPFPLTLRFKPMLQQGIELLSLDASWVSSASWYFLNVFGLRSMYSLILGQDNGADQSRIMQEQMSGAAMAMPADTNKAFKAEWEALELTDHQWA 233          
BLAST of CK935288 vs. ExPASy Swiss-Prot
Match: TM111_RAT (Transmembrane protein 111 OS=Rattus norvegicus GN=Tmem111 PE=2 SV=3)

HSP 1 Score: 195.282 bits (495), Expect = 3.053e-49
Identity = 97/231 (41.99%), Postives = 149/231 (64.50%), Query Frame = 3
Query:   78 DLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNLRAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMM-QMSGFGF----DPSKSLGAEKDSLDIIQHEWA 755
            +L+LD+ IR WV++P+ ++   +G++R++VS L++S +    + V + QV++R+R LR    +I  +SF  R+ YF N E+G     K +         +DP M  DMMK N++ ++P  L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR ++SLILG++NA D ++ M  QM+G       D +K+   E ++L++  H+WA
Sbjct:    5 ELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLRENGKYIPKQSFLTRKYYFNNPEDGFFKKTKRKV--VPPSPMTDPTMLTDMMKGNVTNVLPMILIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIYSLILGQDNAADQSRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWA 233          
BLAST of CK935288 vs. ExPASy Swiss-Prot
Match: TM111_PONAB (Transmembrane protein 111 OS=Pongo abelii GN=TMEM111 PE=2 SV=3)

HSP 1 Score: 195.282 bits (495), Expect = 3.053e-49
Identity = 97/231 (41.99%), Postives = 149/231 (64.50%), Query Frame = 3
Query:   78 DLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNLRAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMM-QMSGFGF----DPSKSLGAEKDSLDIIQHEWA 755
            +L+LD+ IR WV++P+ ++   +G++R++VS L++S +    + V + QV++R+R LR    +I  +SF  R+ YF N E+G     K +         +DP M  DMMK N++ ++P  L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR ++SLILG++NA D ++ M  QM+G       D +K+   E ++L++  H+WA
Sbjct:    5 ELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLRENGKYIPKQSFLTRKYYFNNPEDGFFKKTKRKV--VPPSPMTDPTMLTDMMKGNVTNVLPMILIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIYSLILGQDNAADQSRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWA 233          
BLAST of CK935288 vs. ExPASy Swiss-Prot
Match: TM111_MOUSE (Transmembrane protein 111 OS=Mus musculus GN=Tmem111 PE=2 SV=3)

HSP 1 Score: 195.282 bits (495), Expect = 3.053e-49
Identity = 97/231 (41.99%), Postives = 149/231 (64.50%), Query Frame = 3
Query:   78 DLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNLRAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMM-QMSGFGF----DPSKSLGAEKDSLDIIQHEWA 755
            +L+LD+ IR WV++P+ ++   +G++R++VS L++S +    + V + QV++R+R LR    +I  +SF  R+ YF N E+G     K +         +DP M  DMMK N++ ++P  L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR ++SLILG++NA D ++ M  QM+G       D +K+   E ++L++  H+WA
Sbjct:    5 ELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLRENGKYIPKQSFLTRKYYFNNPEDGFFKKTKRKV--VPPSPMTDPTMLTDMMKGNVTNVLPMILIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIYSLILGQDNAADQSRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWA 233          
BLAST of CK935288 vs. ExPASy Swiss-Prot
Match: TM111_HUMAN (Transmembrane protein 111 OS=Homo sapiens GN=TMEM111 PE=1 SV=3)

HSP 1 Score: 195.282 bits (495), Expect = 3.053e-49
Identity = 97/231 (41.99%), Postives = 149/231 (64.50%), Query Frame = 3
Query:   78 DLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNLRAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMM-QMSGFGF----DPSKSLGAEKDSLDIIQHEWA 755
            +L+LD+ IR WV++P+ ++   +G++R++VS L++S +    + V + QV++R+R LR    +I  +SF  R+ YF N E+G     K +         +DP M  DMMK N++ ++P  L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR ++SLILG++NA D ++ M  QM+G       D +K+   E ++L++  H+WA
Sbjct:    5 ELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLRENGKYIPKQSFLTRKYYFNNPEDGFFKKTKRKV--VPPSPMTDPTMLTDMMKGNVTNVLPMILIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIYSLILGQDNAADQSRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWA 233          
BLAST of CK935288 vs. ExPASy Swiss-Prot
Match: TM111_BOVIN (Transmembrane protein 111 OS=Bos taurus GN=TMEM111 PE=2 SV=3)

HSP 1 Score: 194.897 bits (494), Expect = 3.988e-49
Identity = 97/231 (41.99%), Postives = 149/231 (64.50%), Query Frame = 3
Query:   78 DLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNLRAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMM-QMSGFGF----DPSKSLGAEKDSLDIIQHEWA 755
            +L+LD+ IR WV++P+ ++   +G++R++VS L++S +    + V + QV++R+R LR    +I  +SF  R+ YF N E+G     K +         +DP M  DMMK N++ ++P  L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR ++SLILG++NA D ++ M  QM+G       D +K+   E ++L++  H+WA
Sbjct:    5 ELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLRENGKYIPKQSFLTRKYYFNNPEDGFFKKTKRKV--VPPSPVTDPTMLTDMMKGNVTNVLPMILIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIYSLILGQDNAADQSRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWA 233          
BLAST of CK935288 vs. ExPASy Swiss-Prot
Match: YNY3_SCHPO (UPF0347 membrane protein C1711.03 OS=Schizosaccharomyces pombe GN=SPBC1711.03 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.061e-41
Identity = 94/242 (38.84%), Postives = 147/242 (60.74%), Query Frame = 3
Query:   75 EDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKI-VKEGQVIVRARNLRAGANFISPKSFRARRVYFCN--EENGLLHVPKGQAQNAQAQMFSDPNMA--MDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMMQMSGF------------GFDPSKSLGAEKDSLDIIQHE 749
            + L+LD A+R+WVL+P+  VM+LIGILR+  + L++SS     K  ++E +++ RA  LRA +N + P+S  AR+ +     +    L      A  A   +  D  +   M+ MK N+ M++PQT+   W+N FFSGF+  K+PFPLT RF+S+ Q+G+    +DV +VSS SWYFLNLFGL+ +++L+LGE NA  +    M M+GF            G D SK + +E +++ I+++E
Sbjct:    2 QKLLLDPALRNWVLLPIMFVMILIGILRHNATILLQSSPKKLSKEEIREQRLLQRAYALRACSNSLLPESIEARKCFLIESLKSGKYLKPVDPNAPKAANPLMDDKTLEGLMESMKGNMLMVVPQTIIMTWINEFFSGFILLKLPFPLTLRFKSIFQSGVATQDLDVQWVSSISWYFLNLFGLKSVYALLLGENNAASNATNEMGMAGFSSAAATAQLIQPGQDISKMMLSEAENVQILKNE 243          
BLAST of CK935288 vs. ExPASy Swiss-Prot
Match: TM111_DICDI (Transmembrane protein 111 homolog OS=Dictyostelium discoideum GN=tmem111 PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 5.056e-36
Identity = 92/244 (37.70%), Postives = 143/244 (58.61%), Query Frame = 3
Query:   81 LVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMR--SSQVPDPKIVKEGQVIVRARNLRAGANFISPKSFRARRVYFCNE-----ENGLLH--VPKGQAQNAQAQMFS-----DPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPF-PLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMMQMSGFGFDPS------KSLGAEKDSLDIIQHE 749
            +VLD  IR+WV+IP+ +V+ ++  L+  +S++M+  S +  D +   + Q I R R L +  N I  KSF  R+ Y C         G+L    P  +  N    MF+     DP+   DM+K N+  +IPQ    +WVN FFSGFVA K+PF PLT RF++ LQ GI++ ++DVSYVSS SWYFL  FG  G+ +++LGE   + D+Q ++Q S     P+      K   +EK+++++I+++
Sbjct:    6 IVLDVEIRNWVVIPILIVLFIVSALKLNISRIMQINSGKPQDVEKTMQMQTINRVRRLVSFYNRIPQKSFFIRKAYLCGTTGSKTNKGILSSIAPTQEDSNPMNMMFANSMFTDPSGITDMLKGNIMHLIPQVTMMSWVNHFFSGFVACKLPFFPLTIRFKTFLQRGIEMGSLDVSYVSSLSWYFLCWFGSEGINAILLGENMVSADSQ-LLQSSIEPGPPTQQTPIHKIYASEKENIEMIRYD 248          
BLAST of CK935288 vs. ExPASy Swiss-Prot
Match: EMC3_YEAS6 (ER membrane protein complex subunit 3 OS=Saccharomyces cerevisiae (strain AWRI1631) GN=AIM27 PE=3 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.425e-30
Identity = 83/244 (34.02%), Postives = 134/244 (54.92%), Query Frame = 3
Query:   81 LVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPD--PKI-VKEGQVIVRARNLRAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQA-----QMFSDPNMA---MDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMMQMSGFG----------FDPSKSLGAEKDSLDIIQHE 749
            ++LD  ++ WVL+P+S+VMVL G+L+ ++  L+  S   +  P++ + E Q +  A+ L      +S  +F A++ +   +     H+ K + Q           F+DPNM+   M+M K N++  IPQT+   WVN FF+GF+  ++PFPLT +F+ MLQ GI    +DV +VSS SWYF+++ GL  +++LI       +D Q M   +G G              K++ A  + L IIQHE
Sbjct:    1 MLLDDQLKYWVLLPISIVMVLTGVLKQYIMTLITGSSANEAQPRVKLTEWQYLQWAQLLIGNGGNLSSDAFAAKKEFLVKDLTEERHLAKAKQQGGSQAGEVPNPFNDPNMSNAMMNMAKGNMASFIPQTIIMWWVNHFFAGFILMQLPFPLTAKFKEMLQTGIICQDLDVRWVSSISWYFISVLGLNPVYNLI-----GLND-QDMGIQAGIGGPQGPQGPPQSQVDKAMHAMANDLTIIQHE 238          
BLAST of CK935288 vs. ExPASy Swiss-Prot
Match: EMC3_YEAS1 (ER membrane protein complex subunit 3 OS=Saccharomyces cerevisiae (strain RM11-1a) GN=AIM27 PE=3 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.425e-30
Identity = 83/244 (34.02%), Postives = 134/244 (54.92%), Query Frame = 3
Query:   81 LVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPD--PKI-VKEGQVIVRARNLRAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQA-----QMFSDPNMA---MDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMMQMSGFG----------FDPSKSLGAEKDSLDIIQHE 749
            ++LD  ++ WVL+P+S+VMVL G+L+ ++  L+  S   +  P++ + E Q +  A+ L      +S  +F A++ +   +     H+ K + Q           F+DPNM+   M+M K N++  IPQT+   WVN FF+GF+  ++PFPLT +F+ MLQ GI    +DV +VSS SWYF+++ GL  +++LI       +D Q M   +G G              K++ A  + L IIQHE
Sbjct:    1 MLLDDQLKYWVLLPISIVMVLTGVLKQYIMTLITGSSANEAQPRVKLTEWQYLQWAQLLIGNGGNLSSDAFAAKKEFLVKDLTEERHLAKAKQQGGSQAGEVPNPFNDPNMSNAMMNMAKGNMASFIPQTIIMWWVNHFFAGFILMQLPFPLTAKFKEMLQTGIICQDLDVRWVSSISWYFISVLGLNPVYNLI-----GLND-QDMGIQAGIGGPQGPQGPPQSQVDKAMHAMANDLTIIQHE 238          
The following BLAST results are available for this feature:
BLAST of CK935288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
TM111_DANRE1.371e-4942.98Transmembrane protein 111 OS=Danio rerio GN=tmem11... [more]
TM111_RAT3.053e-4941.99Transmembrane protein 111 OS=Rattus norvegicus GN=... [more]
TM111_PONAB3.053e-4941.99Transmembrane protein 111 OS=Pongo abelii GN=TMEM1... [more]
TM111_MOUSE3.053e-4941.99Transmembrane protein 111 OS=Mus musculus GN=Tmem1... [more]
TM111_HUMAN3.053e-4941.99Transmembrane protein 111 OS=Homo sapiens GN=TMEM1... [more]
TM111_BOVIN3.988e-4941.99Transmembrane protein 111 OS=Bos taurus GN=TMEM111... [more]
YNY3_SCHPO3.061e-4138.84UPF0347 membrane protein C1711.03 OS=Schizosacchar... [more]
TM111_DICDI5.056e-3637.70Transmembrane protein 111 homolog OS=Dictyostelium... [more]
EMC3_YEAS61.425e-3034.02ER membrane protein complex subunit 3 OS=Saccharom... [more]
EMC3_YEAS11.425e-3034.02ER membrane protein complex subunit 3 OS=Saccharom... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004563_D11 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIF_D11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935288 ID=CK935288; Name=CK935288; organism=Citrus sinensis; type=EST; length=757bp
GCGGGAAACAAAAACGAAAACAATCGAAATCGNNNACCCACAGGCACAGG
CANNNNTACAGAGCATCAATGGCGGAAGATCTGGTGCTTGACACGGCGAT
CAGAGACTGGGTGCTGATACCGCTGTCAGTTGTGATGGTGCTCATTGGAA
TTCTCCGTTACTTCGTCTCTAAGCTTATGCGCTCCTCTCAAGTGCCCGAT
CCTAAAATCGTTAAAGAAGGACAAGTGATTGTTAGGGCGCGGAATTTGCG
TGCTGGCGCTAATTTTATCTCTCCAAAGTCTTTTCGCGCTCGCAGAGTTT
ATTTCTGTAACGAGGAAAATGGATTGTTGCATGTGCCAAAGGGTCAGGCA
CAAAATGCGCAAGCGCAAATGTTTTCCGATCCTAACATGGCAATGGACAT
GATGAAGAAAAATCTTTCAATGATCATACCCCAGACCCTTACTTTTGCTT
GGGTCAACTTTTTCTTCTCTGGGTTTGTTGCAGCCAAGATACCATTCCCA
CTGACTCAGAGGTTCAGGTCAATGTTACAAAATGGGATTGACTTGAGCAC
TGTTGATGTAAGCTATGTCAGTAGTCGTTCATGGTACTTCCTCAATTTGT
TTGGACTGAGGGGTTTATTTAGCCTCATTCTGGGGGAAGAAAATGCTACT
GATGATACTCAGCGTATGATGCAAATGAGTGGGTTTGGCTTTGACCCAAG
CAAGAGCTTGGGTGCTGAGAAAGACAGTCTGGACATAATTCAGCATGAAT
GGGCCTT
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