CK935303
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK935303 vs. ExPASy Swiss-Prot
Match: ISPF_ARATH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=ISPF PE=1 SV=1) HSP 1 Score: 300.442 bits (768), Expect = 7.103e-81 Identity = 145/157 (92.36%), Postives = 153/157 (97.45%), Query Frame = 1 Query: 310 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKEXXRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAAHTVILLM 780 LPFR+GHGFDLHRLEPGYPLIIGGI +PH+RGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGA SSVFIKEAVRLMDEAGYEIGNLDATLILQRPK+SP+KE R+NLS+LLGADP+VVNLKAKTHEKVDSLGENRSIAAHTVILLM Sbjct: 73 LPFRIGHGFDLHRLEPGYPLIIGGIVIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAASSVFIKEAVRLMDEAGYEIGNLDATLILQRPKISPHKETIRSNLSKLLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVILLM 229
BLAST of CK935303 vs. ExPASy Swiss-Prot
Match: ISPF_CATRO (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Catharanthus roseus GN=ISPF PE=2 SV=1) HSP 1 Score: 298.516 bits (763), Expect = 2.699e-80 Identity = 143/157 (91.08%), Postives = 151/157 (96.18%), Query Frame = 1 Query: 310 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKEXXRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAAHTVILLM 780 L FRVGHGFDLHRLEPGYPLIIGGIN+PH+RGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPD+DPKWKGAPSSVFIKEAVRLMDEAGYE+GNLDATLILQRPK+SP+KE R NL +LLGADP VVNLKAKTHEKVDSLGENRSIAAHTV+LLM Sbjct: 78 LSFRVGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDTDPKWKGAPSSVFIKEAVRLMDEAGYELGNLDATLILQRPKVSPHKEAIRQNLCQLLGADPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLM 234
BLAST of CK935303 vs. ExPASy Swiss-Prot
Match: ISPF_LYSSC (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Lysinibacillus sphaericus (strain C3-41) GN=ispF PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 6.083e-40 Identity = 78/155 (50.32%), Postives = 108/155 (69.68%), Query Frame = 1 Query: 316 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKEXXRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAAHTVILLM 780 FR+G GFD+H E G PLIIGGI +PHE+G HSD DVLLH V DA LGA+G DIG+ FPD+DP +K A S+ ++ +++++ GY +GN+D T++ QRPK++PY E + ++ELL A+P+ VN+KA T E++ G IAA ILLM Sbjct: 2 FRIGQGFDVHAFEEGRPLIIGGITIPHEKGLVGHSDADVLLHTVTDAALGAIGEGDIGRHFPDTDPAFKDADSAKLLEYIWKIVEDKGYILGNVDCTIMAQRPKMAPYIEQMQNRIAELLHAEPSQVNVKATTTERLGFTGREEGIAAMATILLM 156
BLAST of CK935303 vs. ExPASy Swiss-Prot
Match: ISPDF_ERYLH (Bifunctional enzyme ispD/ispF OS=Erythrobacter litoralis (strain HTCC2594) GN=ispDF PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 6.083e-40 Identity = 75/150 (50.00%), Postives = 103/150 (68.67%), Query Frame = 1 Query: 310 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKEXXRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAA 759 LP RVG GFD+H+LE G L +GGI + H++G HSD DV LH +VDA+LGA+G DIG FP SDP+WKGA SS FI+ A +L+DEAGY +GN+D T+I + P++ P+++ ++ELL P +++KA T EK+ G IAA Sbjct: 224 LPVRVGTGFDVHKLEAGEELWLGGIRLEHDKGLAGHSDADVALHAIVDALLGAIGKGDIGDHFPPSDPQWKGAASSAFIEHAAKLVDEAGYRVGNIDLTIICEAPRIGPHRDAMGQRIAELLATSPDAISVKATTTEKLGFTGRGEGIAA 373
BLAST of CK935303 vs. ExPASy Swiss-Prot
Match: ISPF_RALME (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=ispF PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 7.945e-40 Identity = 79/153 (51.63%), Postives = 106/153 (69.28%), Query Frame = 1 Query: 319 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKEXXRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAAHTVILL 777 R+G G+D+H L PG LI+GG+++PH+RG HSD D LLH V DA+ GA L DIG+ FPD+DP + GA S V ++EAVR + EAGYEIGN+DAT+I Q+PKL+P+ NL+E LG T N+KAKT+EK+ G+ I A +L+ Sbjct: 7 RIGQGYDVHALVPGRKLILGGVDIPHDRGLLGHSDADALLHAVTDALFGAAALGDIGRHFPDTDPNFAGADSRVLLREAVRRVREAGYEIGNVDATVIAQKPKLAPHISGMVANLAEDLGLPVTRCNVKAKTNEKLGFEGKEEGIVAQAAVLI 159
BLAST of CK935303 vs. ExPASy Swiss-Prot
Match: ISPF_GEOSL (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Geobacter sulfurreducens GN=ispF PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 5.150e-39 Identity = 75/153 (49.02%), Postives = 106/153 (69.28%), Query Frame = 1 Query: 319 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKEXXRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAAHTVILL 777 R+GHG+D+HRL G LI+GG+++PHE G HSD DVLLH + DAILGAL L DIG+ FPD+DP++KGA S ++ + L G+ +GNLDAT++ QRPK++P+ R +++ L ADP VN+KA T E++ G IAA+ V+L+ Sbjct: 2 RIGHGYDVHRLVAGRKLIVGGVDIPHELGLLGHSDADVLLHAISDAILGALALGDIGKHFPDTDPRYKGADSRALLRHVMELATRKGFHLGNLDATIVAQRPKMAPHIPLMREHIAADLMADPDRVNVKATTTEELGFAGRGEGIAAYAVVLM 154
BLAST of CK935303 vs. ExPASy Swiss-Prot
Match: ISPF_BORA1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bordetella avium (strain 197N) GN=ispF PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.147e-38 Identity = 80/156 (51.28%), Postives = 105/156 (67.31%), Query Frame = 1 Query: 310 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKEXXRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAAHTVILL 777 +PFRVG GFD+H L G PLIIGG+ + H G HSD DVLLH V DAILGA GL DIG+ FPD+DP++KGA S V ++EA+ +D AG+++ N+DAT+ Q PK+ P+ N++ LG +VN+KAKT+E + LG IAA V LL Sbjct: 3 IPFRVGQGFDVHALVTGRPLIIGGVRIEHSHGLLGHSDADVLLHAVTDAILGAAGLGDIGRHFPDTDPRFKGADSRVLLREAMARVDAAGWQVVNVDATVHAQAPKIGPHAPAMVANIAADLGIAHDLVNIKAKTNEGLGYLGRKEGIAATVVTLL 158
BLAST of CK935303 vs. ExPASy Swiss-Prot
Match: ISPF_THISH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=ispF PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.498e-38 Identity = 73/153 (47.71%), Postives = 104/153 (67.97%), Query Frame = 1 Query: 319 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKEXXRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAAHTVILL 777 R+GHG+D+H + G +++GG+ +PH + AHSDGDVL+H + DA+LGA L DIG+ FPD+DP +KGA S V ++ V L+ E GY +GN+DAT+I Q PK++P+ E R NL++ LG VN+KA T E++ G IAAH V L+ Sbjct: 5 RIGHGYDVHAFKAGGHVVLGGVRIPHAKAFAAHSDGDVLIHALCDALLGAAALGDIGRHFPDTDPAYKGADSRVLLRRVVELLHEQGYRVGNVDATIIAQAPKMAPHIEAMRANLADDLGVALECVNVKATTTERLGFAGREEGIAAHAVALI 157
BLAST of CK935303 vs. ExPASy Swiss-Prot
Match: ISPF_RALPJ (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Ralstonia pickettii (strain 12J) GN=ispF PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.498e-38 Identity = 76/156 (48.72%), Postives = 105/156 (67.31%), Query Frame = 1 Query: 310 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKEXXRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAAHTVILL 777 + R+G G+D+H L G LI+GG+ +PH RG HSD D LLH + DA+ GA GL DIG+ FPD+DP + GA S V ++EAVR + +AGY +GN+DAT+I Q+PKL+P+ NL+E LG P N+KAKT+EK+ G+ I A V+L+ Sbjct: 4 MDIRIGQGYDVHALVEGRKLILGGVEIPHTRGLLGHSDADALLHAITDALFGAAGLGDIGRHFPDTDPAFAGADSRVLLREAVRRVHKAGYAVGNVDATVIAQKPKLAPHVPGMVANLAEDLGIAPERCNVKAKTNEKLGFEGKEEGIVAQAVVLI 159
BLAST of CK935303 vs. ExPASy Swiss-Prot
Match: ISPF_ACIBL (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Acidobacteria bacterium (strain Ellin345) GN=ispF PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.498e-38 Identity = 77/153 (50.33%), Postives = 103/153 (67.32%), Query Frame = 1 Query: 319 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKEXXRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAAHTVILL 777 RVG GFD H G PL IGG+ +PH G HSDGDVLLH + DA+LGA+ DIG FP SDPKWKGA S VFI+EA+R ++ AGY +GN+D +L+L PK+ P+ + + ++++LL +PT V +KAKT E L + + AH V+LL Sbjct: 3 RVGLGFDSHEFREGIPLRIGGLTIPHTHGLSGHSDGDVLLHAITDALLGAVAAGDIGAFFPPSDPKWKGANSVVFIEEAMRHIETAGYRVGNVDCSLVLNAPKIGPHAKAIQESVAKLLKIEPTAVGIKAKTPE---GLNLDGTALAHVVVLL 152 The following BLAST results are available for this feature:
BLAST of CK935303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935303 ID=CK935303; Name=CK935303; organism=Citrus sinensis; type=EST; length=780bpback to top |