CK935406
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK935406 vs. ExPASy Swiss-Prot
Match: RL27_PEA (60S ribosomal protein L27 OS=Pisum sativum GN=RPL27 PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 1.151e-44 Identity = 88/97 (90.72%), Postives = 90/97 (92.78%), Query Frame = 1 Query: 4 GHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 294 GHCLVAGIKK+P KVI+KDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKD V D LQSKDKKVTA KETKK LEERFKTGKNRWFFTKLRF Sbjct: 39 GHCLVAGIKKFPSKVIKKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKKSLEERFKTGKNRWFFTKLRF 135
BLAST of CK935406 vs. ExPASy Swiss-Prot
Match: RL272_ARATH (60S ribosomal protein L27-2 OS=Arabidopsis thaliana GN=RPL27B PE=2 SV=2) HSP 1 Score: 174.866 bits (442), Expect = 1.662e-43 Identity = 83/97 (85.57%), Postives = 90/97 (92.78%), Query Frame = 1 Query: 4 GHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 294 GHCLVAG+KKYP KVIRKDSAKKTAKKSRVK F+KLVNYQHLMPTRYTLDVDLK+V + D+L+SKDKKVTA KE K +LEERFKTGKNRWFFTKLRF Sbjct: 39 GHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALKSKDKKVTALKEAKAKLEERFKTGKNRWFFTKLRF 135
BLAST of CK935406 vs. ExPASy Swiss-Prot
Match: RL273_ARATH (60S ribosomal protein L27-3 OS=Arabidopsis thaliana GN=RPL27C PE=2 SV=2) HSP 1 Score: 174.481 bits (441), Expect = 2.170e-43 Identity = 83/97 (85.57%), Postives = 89/97 (91.75%), Query Frame = 1 Query: 4 GHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 294 GHCLVAG+KKYP KVIRKDSAKKTAKKSRVK F+KLVNYQHLMPTRYTLDVDLK+V + D+LQSKDKKV A KE K +LEERFKTGKNRWFFTKLRF Sbjct: 39 GHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEERFKTGKNRWFFTKLRF 135
BLAST of CK935406 vs. ExPASy Swiss-Prot
Match: RL271_ARATH (60S ribosomal protein L27-1 OS=Arabidopsis thaliana GN=RPL27A PE=2 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 2.400e-42 Identity = 80/97 (82.47%), Postives = 89/97 (91.75%), Query Frame = 1 Query: 4 GHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 294 GHCLVAG+KKYP KVIRKDSAKKTAKKSRVK F K++NYQH+MPTRYTLD+DLK+VVSAD++ SKDKKVTA KE K + EERFKTGKNRWFFTKLRF Sbjct: 39 GHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFFKVINYQHVMPTRYTLDLDLKNVVSADAISSKDKKVTALKEAKAKFEERFKTGKNRWFFTKLRF 135
BLAST of CK935406 vs. ExPASy Swiss-Prot
Match: RL27_SOLTU (60S ribosomal protein L27 OS=Solanum tuberosum GN=RPL27 PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.043e-37 Identity = 79/101 (78.22%), Postives = 86/101 (85.15%), Query Frame = 1 Query: 4 GHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL----KDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 294 GHCLVAGI +YP KVIRKDSAKK KKSRVKAF+KLVNY H+MPTRYTLD DL KDVV+AD LQ++DKKVTA + TK RL ERFKTGKNRWFFTKLRF Sbjct: 39 GHCLVAGISRYPKKVIRKDSAKKAGKKSRVKAFIKLVNYNHIMPTRYTLDEDLKDVVKDVVNADVLQARDKKVTA-RRTKARLAERFKTGKNRWFFTKLRF 138
BLAST of CK935406 vs. ExPASy Swiss-Prot
Match: RL27_PYRST (60S ribosomal protein L27 OS=Pyrobotrys stellata GN=RPL27 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 3.974e-29 Identity = 63/97 (64.95%), Postives = 75/97 (77.32%), Query Frame = 1 Query: 4 GHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 294 GH LV G++K P KV ++ S KK AKKS +K F+K VNY HLMPTRYTLDVD K V+A++ ++ KKV A KE KK LEE+FKTGKNRWFFTKLRF Sbjct: 39 GHALVVGLQKEPRKVTKRQSQKKQAKKSTLKTFIKTVNYNHLMPTRYTLDVDFKG-VAAEAQENPTKKVEARKECKKLLEEKFKTGKNRWFFTKLRF 134
BLAST of CK935406 vs. ExPASy Swiss-Prot
Match: RL27B_YEAST (60S ribosomal protein L27-B OS=Saccharomyces cerevisiae GN=RPL27B PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 4.112e-26 Identity = 54/98 (55.10%), Postives = 73/98 (74.49%), Query Frame = 1 Query: 4 GHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVD-LKDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 294 GH LVAGI++YP KV +K AKK AK++++K F+K+VNY HL+PTRYTLDV+ K VVS ++ + ++ A K KK EER + GKN+WFF+KLRF Sbjct: 39 GHALVAGIERYPSKVTKKHGAKKVAKRTKIKPFIKVVNYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREEAKKVVKKAFEERHQAGKNQWFFSKLRF 136
BLAST of CK935406 vs. ExPASy Swiss-Prot
Match: RL27A_YEAST (60S ribosomal protein L27-A OS=Saccharomyces cerevisiae GN=RPL27A PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.196e-25 Identity = 54/98 (55.10%), Postives = 73/98 (74.49%), Query Frame = 1 Query: 4 GHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVD-LKDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 294 GH LVAGI++YP KV +K AKK AK++++K F+K+VNY HL+PTRYTLDV+ K VVS ++ + ++ A K KK EER + GKN+WFF+KLRF Sbjct: 39 GHALVAGIERYPLKVTKKHGAKKVAKRTKIKPFIKVVNYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREEAKKVVKKAFEERHQAGKNQWFFSKLRF 136
BLAST of CK935406 vs. ExPASy Swiss-Prot
Match: RL27_HIPCM (60S ribosomal protein L27 OS=Hippocampus comes GN=rpl27 PE=2 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 1.463e-23 Identity = 54/97 (55.67%), Postives = 68/97 (70.10%), Query Frame = 1 Query: 7 HCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 294 H LVAGI +YP KV KK AK+S++KAFVK+ NY HLMPTRY++D+ L K VV+ D + K A +E K + EER+KTGKN+WFF KLRF Sbjct: 40 HALVAGIDRYPRKVTAPMGKKKIAKRSKIKAFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKSKARREAKVKFEERYKTGKNKWFFQKLRF 136
BLAST of CK935406 vs. ExPASy Swiss-Prot
Match: RL27_DANRE (60S ribosomal protein L27 OS=Danio rerio GN=rpl27 PE=2 SV=3) HSP 1 Score: 108.227 bits (269), Expect = 1.910e-23 Identity = 54/97 (55.67%), Postives = 68/97 (70.10%), Query Frame = 1 Query: 7 HCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 294 H LVAGI +YP KV KK AK+S++KAFVK+ NY HLMPTRY++D+ L K VV+ D + K A +E K + EER+KTGKN+WFF KLRF Sbjct: 40 HALVAGIDRYPRKVTATMGKKKIAKRSKIKAFVKVFNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136 The following BLAST results are available for this feature:
BLAST of CK935406 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK935406 ID=CK935406; Name=CK935406; organism=Citrus sinensis; type=EST; length=480bpback to top |