CK935410
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK935410 vs. ExPASy Swiss-Prot
Match: FB84_ARATH (F-box protein At1g70590 OS=Arabidopsis thaliana GN=At1g70590 PE=2 SV=1) HSP 1 Score: 357.066 bits (915), Expect = 7.641e-98 Identity = 183/292 (62.67%), Postives = 218/292 (74.66%), Query Frame = 2 Query: 11 MKQRTWPDRSTGSRFTALQFPITEKDNRRPELTXXXXXXXXXXXXXFSCSRSIKS----TEGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRG-VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQTAVLGDPAGQFNLGISYLQAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFT 871 MKQRTWP RS GSRF++L F ++R ++ S S S S E DF+ LP+D+L KIAA F+ P L+AASLVCKSW DAL+PLRE+M+L+RWGK++KHGRG VR NLDKALDSFLKGA RGSTLAMVDAGL+YWE +KE A++LYR+ + LGD GQ NLGI+YLQ QP+N +EA+K L Q++ G+VRAQYQLALCLH GR V NL EA +WYL+AAEGGYVRAMYN SLCYS GEGLP + + ARKWMKRAAD GH KAQ EHGL LF+ Sbjct: 1 MKQRTWPCRSEGSRFSSLSFLKPHDKDKRSRISSINKATAKSTTSSRSSSSSSSSRPPSNEFGDFSMLPYDILMKIAAPFSHPNLQAASLVCKSWRDALKPLRESMLLIRWGKKYKHGRGGVRANLDKALDSFLKGAMRGSTLAMVDAGLVYWERGEKEKAVNLYRRASELGDAVGQCNLGIAYLQVQPSNPKEAMKWLKQSAENGYVRAQYQLALCLHHGRVVQTNLLEATKWYLKAAEGGYVRAMYNISLCYSVGEGLPQNRKLARKWMKRAADHGHSKAQFEHGLALFS 292
BLAST of CK935410 vs. ExPASy Swiss-Prot
Match: SE1L1_RAT (Protein sel-1 homolog 1 OS=Rattus norvegicus GN=Sel1l PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 4.745e-15 Identity = 53/173 (30.64%), Postives = 88/173 (50.87%), Query Frame = 2 Query: 350 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQTAVLGDPAGQFNLGISYLQAQ--PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 847 GRGV +N +A D F A G++ AM G MY E E A+ +++ A +G+P GQ LG++YL + N + A+K +A+ G V Q QL + G GV + ++A +++ A++GG++ A YN + ++ G G+ S A + K + G +L Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERL 559
BLAST of CK935410 vs. ExPASy Swiss-Prot
Match: SE1L1_MOUSE (Protein sel-1 homolog 1 OS=Mus musculus GN=Sel1l PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 4.745e-15 Identity = 53/173 (30.64%), Postives = 88/173 (50.87%), Query Frame = 2 Query: 350 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQTAVLGDPAGQFNLGISYLQAQ--PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 847 GRGV +N +A D F A G++ AM G MY E E A+ +++ A +G+P GQ LG++YL + N + A+K +A+ G V Q QL + G GV + ++A +++ A++GG++ A YN + ++ G G+ S A + K + G +L Sbjct: 383 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERL 555
BLAST of CK935410 vs. ExPASy Swiss-Prot
Match: SE1L1_MESAU (Protein sel-1 homolog 1 OS=Mesocricetus auratus GN=Sel1l PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.745e-15 Identity = 53/173 (30.64%), Postives = 88/173 (50.87%), Query Frame = 2 Query: 350 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQTAVLGDPAGQFNLGISYLQAQ--PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 847 GRGV +N +A D F A G++ AM G MY E E A+ +++ A +G+P GQ LG++YL + N + A+K +A+ G V Q QL + G GV + ++A +++ A++GG++ A YN + ++ G G+ S A + K + G +L Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGIQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERL 559
BLAST of CK935410 vs. ExPASy Swiss-Prot
Match: SE1L1_HUMAN (Protein sel-1 homolog 1 OS=Homo sapiens GN=SEL1L PE=1 SV=3) HSP 1 Score: 82.0333 bits (201), Expect = 4.745e-15 Identity = 53/173 (30.64%), Postives = 88/173 (50.87%), Query Frame = 2 Query: 350 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQTAVLGDPAGQFNLGISYLQAQ--PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL 847 GRGV +N +A D F A G++ AM G MY E E A+ +++ A +G+P GQ LG++YL + N + A+K +A+ G V Q QL + G GV + ++A +++ A++GG++ A YN + ++ G G+ S A + K + G +L Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERL 559
BLAST of CK935410 vs. ExPASy Swiss-Prot
Match: YBEQ_ECOLI (Uncharacterized protein ybeQ OS=Escherichia coli (strain K12) GN=ybeQ PE=4 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 3.759e-12 Identity = 55/182 (30.22%), Postives = 85/182 (46.70%), Query Frame = 2 Query: 332 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-----AISLYRQTAVLGDPAGQFNLGISYLQAQPANAEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHG 856 G+++ + K+ ++A+ K A +G T A G W +D+ EA A+ Y+ A G Q NLG Y + A+ + QA++ GH AQ LA G+GV N AA WYL++A+ G A + + Y+ GEG+ ++QA W +AA G A + G Sbjct: 69 GQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALG---WTLDRGEAPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIG 247 HSP 2 Score: 68.9366 bits (167), Expect = 4.156e-11 Identity = 49/169 (28.99%), Postives = 79/169 (46.75%), Query Frame = 2 Query: 353 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQTAVLGDPAGQFNLGISYLQAQPANAEEAVKLLYQASIA--GHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKA 841 RG N +A+ + A G + A + G MY + K+ A++ Y+Q A+ G Q NL Y + + + + A G+ AQ+Q+A + G GVD + ++A WYL+AA G V A N Y G+G+ ++ A +W +AA+C A Sbjct: 110 RGEAPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATA 278
BLAST of CK935410 vs. ExPASy Swiss-Prot
Match: SE1L2_MOUSE (Protein sel-1 homolog 2 OS=Mus musculus GN=Sel1l2 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.375e-12 Identity = 51/167 (30.54%), Postives = 79/167 (47.31%), Query Frame = 2 Query: 353 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD-----KKEAAISLYRQTAVLGDPAGQFNLGISYLQAQ--PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 832 +G+ ++ KAL FLK A GS AM G MY+E + A + A G+ G LG+ Y + P N EA+K +A+ G AQ+QL + G GV + + A +++ A++ G A+Y + Y+ G G+ S R A + K + GH Sbjct: 312 KGLDQDYSKALYYFLKAAKAGSANAMAFIGKMYFEGNAAAPQNNATAFKYFSMAASKGNAIGLHGLGLLYFHGKGVPVNYGEALKYFQKAAEKGWPNAQFQLGFMYYSGSGVWKDYKLAFKYFYLASQSGQPLAIYYLAEMYATGTGVLRSCRTAVELYKGVCELGH 478
BLAST of CK935410 vs. ExPASy Swiss-Prot
Match: SE1L2_HUMAN (Protein sel-1 homolog 2 OS=Homo sapiens GN=SEL1L2 PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 3.182e-11 Identity = 53/168 (31.55%), Postives = 77/168 (45.83%), Query Frame = 2 Query: 362 RKNLD----KALDSFLKGAARGSTLAMVDAGLMYWEMD-----KKEAAISLYRQTAVLGDPAGQFNLGISYLQAQ--PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGH 832 RK LD KAL FLK A GS AM G MY E + A + A G+ G LG+ Y + P N EA+K +A+ G AQ+QL + G G+ + + A +++ A++ G A+Y + Y+ G G+ S R A + K + GH Sbjct: 311 RKGLDQDYYKALHYFLKAAKAGSANAMAFIGKMYLEGNAAVPQNNATAFKYFSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQLGFMYYSGSGIWKDYKLAFKYFYLASQSGQPLAIYYLAKMYATGTGVVRSCRTAVELYKGVCELGH 478 The following BLAST results are available for this feature:
BLAST of CK935410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK935410 ID=CK935410; Name=CK935410; organism=Citrus sinensis; type=EST; length=872bpback to top |