CK935558

Overview
NameCK935558
Unique NameCK935558
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6974 contig Csv1_Contig6974:160..1035. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935558 vs. ExPASy Swiss-Prot
Match: SUBL_ARATH (Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 3.474e-74
Identity = 140/230 (60.87%), Postives = 168/230 (73.04%), Query Frame = 3
Query:  189 CVVAEARSQQLKKTYVVHMDKSTMPATFNDHFEWYDSSLKSVSASAAMLYTYKNVIHGFSTRLTAKEAESLQRQPGIVSVLPEVRYELHTTRTPEFLGLGK-SETLFPTSEVQSEVIVGVLDTGVWPEIKSFDDTGMGPVPRGWKGVCEVGRNFKSSSCNRKLIGARSFSRGYEEAVGPIDETAESKSPRXXXXXXXXXXXXXXXXVVNGASLFGFASGTARGMAAQARV 875
            C V+ + S Q   TY+VHM KS MP++F+ H  WYDSSL+S+S SA +LYTY+N IHGFSTRLT +EA+SL  QPG++SVLPE RYELHTTRTP FLGL + +  LFP +   S+V+VGVLDTGVWPE KS+ D G GP+P  WKG CE G NF +S CNRKLIGAR F+RGYE  +GPIDE+ ES+SPR                VV GASL G+ASGTARGMA +ARV
Sbjct:   20 CHVSSSSSDQ--GTYIVHMAKSQMPSSFDLHSNWYDSSLRSISDSAELLYTYENAIHGFSTRLTQEEADSLMTQPGVISVLPEHRYELHTTRTPLFLGLDEHTADLFPEAGSYSDVVVGVLDTGVWPESKSYSDEGFGPIPSSWKGGCEAGTNFTASLCNRKLIGARFFARGYESTMGPIDESKESRSPRDDDGHGTHTSSTAAGSVVEGASLLGYASGTARGMAPRARV 247          
BLAST of CK935558 vs. ExPASy Swiss-Prot
Match: CUCM1_CUCME (Cucumisin OS=Cucumis melo PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.477e-32
Identity = 83/220 (37.73%), Postives = 117/220 (53.18%), Query Frame = 3
Query:  222 KKTYVVHMDKSTMP--ATFNDHFEWYDSSLKSVSASAAMLYTYKNVIHGFSTRLTAKEAESLQRQPGIVSVLPEVRYELHTTRTPEFLGLGKSETLFPTSEVQSEVIVGVLDTGVWPEIKSFDDTGMGPVPRGWKGVCEVGRNFKSSSCNRKLIGARSFSRGYEEAVGPIDETAESKSPRXXXXXXXXXXXXXXXXVVNGASLFGFASGTARGMAAQARV 875
            K  Y+V+M +      +    H    +  + S  A  ++L+TYK   +GF+ +LT +EAE +    G+VSV      ELHTTR+ +FLG     T+   S+V+S ++VGVLDTG+WPE  SFDD G  P P  WKG CE   NF+   CNRK+IGARS+  G   + G ++       PR                +V+ A+L+G   GTARG    AR+
Sbjct:   31 KNIYIVYMGRKLEDPDSAHLHHRAMLEQVVGSTFAPESVLHTYKRSFNGFAVKLTEEEAEKIASMEGVVSVFLNEMNELHTTRSWDFLGFPL--TVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNNFR---CNRKIIGARSYHIGRPISPGDVN------GPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARI 239          
BLAST of CK935558 vs. ExPASy Swiss-Prot
Match: XSP1_ARATH (Xylem serine proteinase 1 OS=Arabidopsis thaliana GN=XSP1 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.761e-23
Identity = 71/229 (31.00%), Postives = 109/229 (47.60%), Query Frame = 3
Query:  198 AEARSQQLKKTYVVHMDK--STMPATFNDHFEWYDS-SLKSVSASAAMLYTYKNVIHGFSTRLTAKEAESLQRQPGIVSVLPEVRYELHTTRTPEFLGLGKSETLFPTSEVQSEVIVGVLDTGVWPEIKSFDDTGMGPVPRGWKGVCEVGRNFKSSSCNRKLIGARSFSRGYEEAVGPIDETAESKSPRXXXXXXXXXXXXXXXXVVNGASLFGFASGTARGMAAQARV 875
            A A  +  K  Y++++         T   H     S ++    A    +Y+Y    + F+ +L+  EA+ +     +VSV      +LHTT++ +F+GL  +      +E   +VI+GVLDTG+ P+ +SF D G+GP P  WKG C   +NF  + CN K+IGA+ F        G      E +SP                 +V  ASL+G A+GTARG    AR+
Sbjct:   27 ASAEDEHAKDFYIIYLGDRPDNTEETIKTHINLLSSLNISQEEAKERKVYSYTKAFNAFAAKLSPHEAKKMMEMEEVVSVSRNQYRKLHTTKSWDFVGLPLTAKRHLKAE--RDVIIGVLDTGITPDSESFLDHGLGPPPAKWKGSCGPYKNF--TGCNNKIIGAKYFKHDGNVPAG------EVRSPIDIDGHGTHTSSTVAGVLVANASLYGIANGTARGAVPSARL 245          
The following BLAST results are available for this feature:
BLAST of CK935558 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
SUBL_ARATH3.474e-7460.87Subtilisin-like protease OS=Arabidopsis thaliana G... [more]
CUCM1_CUCME1.477e-3237.73Cucumisin OS=Cucumis melo PE=1 SV=1[more]
XSP1_ARATH4.761e-2331.00Xylem serine proteinase 1 OS=Arabidopsis thaliana ... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004554_C07 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIIF_C07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935558 ID=CK935558; Name=CK935558; organism=Citrus sinensis; type=EST; length=876bp
GGGGGAGGAGCAAGCGAATCTTTCTTTGGTCCTCGGTGAATCTCTCTTAT
GTTCTTAATTGAACTTCTAAAAACTCAAGCAACTAATAAATACTCACCGA
ATTGTCTCAACTCTACAACTGAGGCTCCAATAAGATGTTGAAGTTGTGGC
TTCTGCAATTGAGTTTAGTTCTGATATTCTGCTACGCATGTGTTGTGGCA
GAAGCGAGGAGCCAGCAACTCAAAAAGACTTATGTAGTCCATATGGACAA
GTCCACCATGCCAGCAACTTTCAACGATCACTTTGAATGGTATGACTCAT
CTTTAAAGTCAGTATCAGCCTCTGCAGCCATGCTTTACACATACAAAAAT
GTAATTCACGGCTTCTCCACAAGGCTAACTGCCAAGGAAGCAGAGTCACT
TCAAAGGCAACCGGGGATTGTCTCTGTTCTGCCTGAAGTCAGATATGAAC
TACACACAACTCGAACTCCAGAGTTCCTTGGATTGGGAAAGAGTGAAACT
CTCTTCCCTACATCTGAGGTACAGAGCGAGGTAATCGTCGGAGTCTTAGA
CACTGGTGTATGGCCTGAGATCAAAAGCTTTGATGACACTGGAATGGGAC
CAGTACCAAGAGGCTGGAAAGGAGTGTGTGAGGTGGGTAGAAACTTCAAA
TCATCAAGCTGTAATCGGAAACTAATTGGCGCAAGGTCATTCTCAAGAGG
GTATGAAGAAGCAGTTGGACCTATTGATGAAACGGCGGAATCAAAGTCGC
CAAGAGATGATGACGGACATGGAACTCACACATCAACCACAGCAGCTGGT
TCAGTGGTCAACGGAGCAAGCCTATTTGGTTTTGCTTCAGGGACAGCACG
TGGAATGGCTGCACAAGCCCGGGTTT
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