CK935624

Overview
NameCK935624
Unique NameCK935624
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935624 vs. ExPASy Swiss-Prot
Match: CAX3_ARATH (Vacuolar cation/proton exchanger 3 OS=Arabidopsis thaliana GN=CAX3 PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.164e-51
Identity = 113/224 (50.45%), Postives = 144/224 (64.29%), Query Frame = 1
Query:  211 KTTQIVSTPIMRKKSDPLLVSNVRFRILREFLANLREVILGTRLALLFPAVPPAVIARLNNFGRPWVFALSLLGLAPLAERVSFLTEQIAYFTGPTVGGLMNATCGNATELVIALFALYENKIHVLKYXXXXXXXXXXXXXXXXXXXXXXXANIREEQRYDRKQADVNSXXXXXXXXXXXXXXXFRYAA--EPGTFPADSI-LQLSRASSILMLLAYVAYIFFQ 873
            +T   +S+  +RKKSD  LV  V  + L+  L+NL+EVILGT+L LLF A+P A++A   N+GRP +F LSL+GL PLAERVSFLTEQ+A++TGPTVGGL+NATCGNATEL+IA+ AL  NK+ V+KY                       ANIR EQR+DRKQADVN                 +YAA  E  T   + + L LSR SSI+ML+AY+AY+ FQ
Sbjct:   32 RTAHNMSSSSLRKKSDLRLVQKVPCKTLKNILSNLQEVILGTKLTLLFLAIPLAILANSYNYGRPLIFGLSLIGLTPLAERVSFLTEQLAFYTGPTVGGLLNATCGNATELIIAILALANNKVAVVKYSLLGSILSNLLLVLGTSLFFGGIANIRREQRFDRKQADVNFFLLLMGLLCHLLPLLLKYAATGEVSTSMINKMSLTLSRTSSIVMLIAYIAYLIFQ 255          
BLAST of CK935624 vs. ExPASy Swiss-Prot
Match: CAX1_ARATH (Vacuolar cation/proton exchanger 1 OS=Arabidopsis thaliana GN=CAX1 PE=1 SV=3)

HSP 1 Score: 197.593 bits (501), Expect = 7.793e-50
Identity = 106/224 (47.32%), Postives = 140/224 (62.50%), Query Frame = 1
Query:  211 KTTQIVSTPIMRKKSDPLLVSNVRFRILREFLANLREVILGTRLALLFPAVPPAVIARLNNFGRPWVFALSLLGLAPLAERVSFLTEQIAYFTGPTVGGLMNATCGNATELVIALFALYENKIHVLKYXXXXXXXXXXXXXXXXXXXXXXXANIREEQRYDRKQADVNSXXXXXXXXXXXXXXXFRYAAEPGTFPA---DSILQLSRASSILMLLAYVAYIFFQ 873
            +T   +S+  +RKKSD  ++  V ++ L++FL+NL+EVILGT+LA+LFPA+P A+I       +PW+F LSLLGL PLAERVSFLTEQ+A++TGPT+GGL+NATCGNATEL+IA+ AL  NK+ V+KY                       ANIR EQR+DRKQADVN                  Y        A   D  L +SR  SI+ML++Y+AY+ FQ
Sbjct:   32 RTAHNMSSSSLRKKSDLRVIQKVPYKGLKDFLSNLQEVILGTKLAILFPAIPAAIICTYCGVSQPWIFGLSLLGLTPLAERVSFLTEQLAFYTGPTLGGLLNATCGNATELIIAILALTNNKVAVVKYSLLGSILSNLLLVLGTSLFCGGIANIRREQRFDRKQADVNFFLLLLGFLCHLLPLLVGYLKNGEASAAVLSDMQLSISRGFSIVMLISYIAYLVFQ 255          
BLAST of CK935624 vs. ExPASy Swiss-Prot
Match: CAX1A_ORYSJ (Vacuolar cation/proton exchanger 1a OS=Oryza sativa subsp. japonica GN=CAX1a PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.772e-47
Identity = 111/227 (48.90%), Postives = 135/227 (59.47%), Query Frame = 1
Query:  208 AKTTQIVSTPIMRKKSDPLLVSNVRFRILREFLANLREVILGTRLALLFPAVPPAVIARLNNFGRPWVFALSLLGLAPLAERVSFLTEQIAYFTGPTVGGLMNATCGNATELVIALFALYENKIHVLKYXXXXXXXXXXXXXXXXXXXXXXXANIREEQRYDRKQADVNSXXXXXXXXXXXXXXXFRYAAEPG-----TFPADSILQLSRASSILMLLAYVAYIFFQ 873
            ++T   +S+  +RKKSD  LV  V    LR  LANL+EV L T+LA+LFPAVP A+ A+   F + WVFALSLLGL PLAERVSFLTEQIA +TGPTVGGL+NATCGNATEL+IALFAL + KI V+K                         N+   Q YDR Q+DV++                RYA   G        A + L LSRA S +ML +YVAY+FFQ
Sbjct:   22 SRTAHNMSSSSLRKKSDAALVRKVPVAPLRPLLANLQEVFLATKLAVLFPAVPLAIAAQCFRFDQVWVFALSLLGLIPLAERVSFLTEQIALYTGPTVGGLLNATCGNATELIIALFALLKGKIEVVKCSLLGSVLSNLLLVLGTSLFCGGVVNLGARQPYDRNQSDVSTALLFLAVLCHSAPLLLRYAVAAGEHSVSATSAAASLDLSRACSFVMLASYVAYLFFQ 248          
BLAST of CK935624 vs. ExPASy Swiss-Prot
Match: CAX4_ARATH (Vacuolar cation/proton exchanger 4 OS=Arabidopsis thaliana GN=CAX4 PE=1 SV=2)

HSP 1 Score: 188.348 bits (477), Expect = 4.728e-47
Identity = 107/260 (41.15%), Postives = 150/260 (57.69%), Query Frame = 1
Query:   94 ISSMDSQGVWELENGGR-IDSSSKEIIRXXXXXXXXXEAAKTTQIVSTPIMRKKSDPLLVSNVRFRILREFLANLREVILGTRLALLFPAVPPAVIARLNNFGRPWVFALSLLGLAPLAERVSFLTEQIAYFTGPTVGGLMNATCGNATELVIALFALYENKIHVLKYXXXXXXXXXXXXXXXXXXXXXXXANIREEQRYDRKQADVNSXXXXXXXXXXXXXXXFRYAAEPGTFPADSILQLSRASSILMLLAYVAYIFF 870
            IS+  S  +  LENGG   D  + E  R                + ++ ++RK+SD  L+S VR+  +R  L NL+EV+LGT+L +LFPAVP AV+A   +  R WVFALSLLGL PLAER+SFLTEQIA+ TGPTVGGLMNATCGNATE++IA+ A+ + K+ ++K                        +N+R+ Q +D +Q D+NS                R+  E   +    ++ LSRASS +ML+AY+A++ F
Sbjct:    4 ISTESSSNLSLLENGGGGSDKPTAETSRRVRRT-----------VSASSLIRKRSDLKLISRVRWEFMRRILTNLQEVLLGTKLFILFPAVPLAVVAHRYDCPRAWVFALSLLGLTPLAERISFLTEQIAFHTGPTVGGLMNATCGNATEMIIAILAVGQRKMRIVKLSLLGSILSNLLFVLGTSLFLGGISNLRKHQSFDPRQGDMNSMLLYLALLCQTLPMIMRFTMEAEEYDGSDVVVLSRASSFVMLIAYLAFLIF 252          
BLAST of CK935624 vs. ExPASy Swiss-Prot
Match: CAX1B_ORYSJ (Vacuolar cation/proton exchanger 1b OS=Oryza sativa subsp. japonica GN=CAX1b PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 8.916e-46
Identity = 108/224 (48.21%), Postives = 132/224 (58.93%), Query Frame = 1
Query:  211 KTTQIVSTPIMRKKSDPLLVSNVRFRILREFLANLREVILGTRLALLFPAVPPAVIARLNNFGRPWVFALSLLGLAPLAERVSFLTEQIAYFTGPTVGGLMNATCGNATELVIALFALYENKIHVLKYXXXXXXXXXXXXXXXXXXXXXXXANIREEQRYDRKQADVNSXXXXXXXXXXXXXXXFRYAAEPG---TFPADSILQLSRASSILMLLAYVAYIFFQ 873
            +T   +S+  +RK SD  L+  V    LR  LANL +V+L TRL LLFPAV  A+ A   +FG+ WVF LSL+GL PLAER+SFLTEQIA++TGPTVGGL+NAT GN TE++IAL AL E KI V+K                        AN+R  Q YD KQA VN+                RYA   G       D+ L LSRA SILML+AY+AY+FFQ
Sbjct:   31 RTAHNLSSSSLRKSSDASLLHKVPCAALRSLLANLNDVLLTTRLFLLFPAVLLAIAATYLHFGQVWVFVLSLIGLVPLAERLSFLTEQIAFYTGPTVGGLLNATFGNVTEVIIALLALREGKIEVVKCSLLGSILSNLLLVLGTSLFLAGIANLRAHQPYDTKQAHVNTALLMLAVLCHSLPLMLRYAVTSGDHAIVSGDAALHLSRACSILMLIAYLAYLFFQ 254          
BLAST of CK935624 vs. ExPASy Swiss-Prot
Match: CAX1C_ORYSJ (Vacuolar cation/proton exchanger 1c OS=Oryza sativa subsp. japonica GN=CAX1c PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.875e-36
Identity = 90/212 (42.45%), Postives = 123/212 (58.02%), Query Frame = 1
Query:  241 MRKKSDPLLVSNVRFRILREFLANLREVILGTRLALLFPAVPPAVIARLNNFGRPWVFALSLLGLAPLAERVSFLTEQIAYFTGPTVGGLMNATCGNATELVIALFALYENKIHVLKYXXXXXXXXXXXXXXXXXXXXXXXANIREEQRYDRKQADVNSXXXXXXXXXXXXXXXFRYAAEPG-TFPADSILQLSRASSILMLLAYVAYIFFQ 873
            ++ ++ PLL      R+L    A L+EV+LGT+L  LF AVP AV A     GR WVFA SL+GLAPLAERVSFL+E IA   GPT GG+MNATCGN  EL+IALFAL++NK+ +LK+                        NI +E+  D++QADV+                 +Y +  G +  + S++QLSR+ +I+ML+AY   + FQ
Sbjct:   53 IKSEASPLLR-----RLLGGPAAQLQEVLLGTKLYPLFSAVPLAVAAESLRLGRVWVFAFSLIGLAPLAERVSFLSEHIANTVGPTAGGIMNATCGNVPELIIALFALHKNKMEILKWSLLGSILSNLLLVLGSSLLFGGIVNIGKERPLDKRQADVSIGLLLLGVLCHIATLVSKYTSSTGDSINSSSVMQLSRSCAIVMLIAYFGSLMFQ 259          
BLAST of CK935624 vs. ExPASy Swiss-Prot
Match: CAX5_ARATH (Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.676e-25
Identity = 70/190 (36.84%), Postives = 96/190 (50.53%), Query Frame = 1
Query:  304 LANLREVILGTRLALLFPAVPPAVIARLNNFGRPWVFALSLLGLAPLAERVSFLTEQIAYFTGPTVGGLMNATCGNATELVIALFALYENKIHVLKYXXXXXXXXXXXXXXXXXXXXXXXANIREEQRYDRKQADVNSXXXXXXXXXXXXXXXFRYAAEPGTFPADSILQLSRASSILMLLAYVAYIFFQ 873
            L + + VIL  +L LL P  P A++       + W+F LSL+G+ PLAER+ + TEQ+A +TG TVGGL+NAT GN TEL+I++FAL    I V++                           ++EQ +D+  A VNS                 Y          S L LSR SS +ML+AY AY+FFQ
Sbjct:   65 LQSFKIVILSNKLNLLLPFGPLAILLHYLTDNKGWIFLLSLVGITPLAERLGYATEQLACYTGSTVGGLLNATFGNVTELIISIFALKSGMIRVVQLTLLGSILSNMLLVLGCAFFCGGLVFSQKEQVFDKGNAVVNSGLLLMAVMGLLFPAVLHY-THSEVHAGSSELALSRFSSCIMLVAYAAYLFFQ 253          
BLAST of CK935624 vs. ExPASy Swiss-Prot
Match: CAX2_ARATH (Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.933e-24
Identity = 69/190 (36.32%), Postives = 97/190 (51.05%), Query Frame = 1
Query:  304 LANLREVILGTRLALLFPAVPPAVIARLNNFGRPWVFALSLLGLAPLAERVSFLTEQIAYFTGPTVGGLMNATCGNATELVIALFALYENKIHVLKYXXXXXXXXXXXXXXXXXXXXXXXANIREEQRYDRKQADVNSXXXXXXXXXXXXXXXFRYAAEPGTFPADSILQLSRASSILMLLAYVAYIFFQ 873
            L +++ VI   +L LL P  P A++       + WVF L+L+G+ PLAER+ + TEQ+A +TGPTVGGL+NAT GN TEL+I++FAL    I V++                           +++Q +D+  A VNS                 Y          S L LSR SS +ML+AY AY+FFQ
Sbjct:   65 LNSIKIVIFCNKLNLLLPFGPLAILVHYMIDSKGWVFLLTLVGITPLAERLGYATEQLACYTGPTVGGLLNATFGNVTELIISIFALKNGMIRVVQLTLLGSILSNMLLVLGCAFFCGGLVFYQKDQVFDKGIATVNSGLLLMAVMGILFPAVLHY-THSEVHAGSSELALSRFSSCIMLIAYAAYLFFQ 253          
BLAST of CK935624 vs. ExPASy Swiss-Prot
Match: CAX2_ORYSJ (Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 4.761e-23
Identity = 67/194 (34.54%), Postives = 101/194 (52.06%), Query Frame = 1
Query:  295 REFLANLREVILGTRLALLFPAVPPAVIAR-LNNFGRPWVFALSLLGLAPLAERVSFLTEQIAYFTGPTVGGLMNATCGNATELVIALFALYENKIHVLKYXXXXXXXXXXXXXXXXXXXXXXXANIREEQRYDRKQADVNSXXXXXXXXXXXXXXXFRYAAEPGTFPADSILQLSRASSILMLLAYVAYIFFQ 873
            R  L ++R VIL  ++ +L P  P AV+   L+   + WVF  SL+G+ PLAER+ + TEQ+A +TGPT+GGL+NAT GNATE++I+L+AL    I V++                         +   +Q +++  A VNS                 +      +   S + LSR SS +ML+AY +Y+FFQ
Sbjct:   58 RRALTSVRVVILQAKINVLLPFGPLAVMLHYLSANHQGWVFLFSLIGITPLAERLGYATEQLALYTGPTIGGLLNATFGNATEMIISLYALKNGMIRVVQQSLLGSILSNMLLVLGCAFFAGGLVHPSRDQVFNKASAVVNSGLLLMAVLGLMFPAVLHFTHSEVQY-GKSEVSLSRFSSCIMLVAYASYLFFQ 250          
BLAST of CK935624 vs. ExPASy Swiss-Prot
Match: CAX3_ORYSJ (Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.809e-22
Identity = 65/196 (33.16%), Postives = 97/196 (49.49%), Query Frame = 1
Query:  286 RILREFLANLREVILGTRLALLFPAVPPAVIARLNNFGRPWVFALSLLGLAPLAERVSFLTEQIAYFTGPTVGGLMNATCGNATELVIALFALYENKIHVLKYXXXXXXXXXXXXXXXXXXXXXXXANIREEQRYDRKQADVNSXXXXXXXXXXXXXXXFRYAAEPGTFPADSILQLSRASSILMLLAYVAYIFFQ 873
            R +   L ++R VI  ++L LL P  P ++I          VF  S+LG+ PLAER+ + TEQ+A +TGPTVGGL+NAT GNATE++IA++AL    I V++                         +  ++Q + +  A VNS                 +        A  +  LSR SS +ML+AY +Y++FQ
Sbjct:   35 RFVESALRSIRIVIFTSKLNLLLPFGPASIILHYTTSRHGLVFLFSMLGITPLAERLGYATEQLAIYTGPTVGGLLNATFGNATEMIIAIYALKNGMIRVVQQSLLGSILSNMLLVMGCAFFAGGIVHRNKDQVFSKATAVVNSGLLLMAVMGLMFPAVLHFTHSEVRQGASEV-SLSRFSSCIMLVAYASYLYFQ 229          
The following BLAST results are available for this feature:
BLAST of CK935624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
CAX3_ARATH3.164e-5150.45Vacuolar cation/proton exchanger 3 OS=Arabidopsis ... [more]
CAX1_ARATH7.793e-5047.32Vacuolar cation/proton exchanger 1 OS=Arabidopsis ... [more]
CAX1A_ORYSJ2.772e-4748.90Vacuolar cation/proton exchanger 1a OS=Oryza sativ... [more]
CAX4_ARATH4.728e-4741.15Vacuolar cation/proton exchanger 4 OS=Arabidopsis ... [more]
CAX1B_ORYSJ8.916e-4648.21Vacuolar cation/proton exchanger 1b OS=Oryza sativ... [more]
CAX1C_ORYSJ2.875e-3642.45Vacuolar cation/proton exchanger 1c OS=Oryza sativ... [more]
CAX5_ARATH8.676e-2536.84Vacuolar cation/proton exchanger 5 OS=Arabidopsis ... [more]
CAX2_ARATH1.933e-2436.32Vacuolar cation/proton exchanger 2 OS=Arabidopsis ... [more]
CAX2_ORYSJ4.761e-2334.54Vacuolar cation/proton exchanger 2 OS=Oryza sativa... [more]
CAX3_ORYSJ1.809e-2233.16Vacuolar cation/proton exchanger 3 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004553_D11 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIF_D11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935624 ID=CK935624; Name=CK935624; organism=Citrus sinensis; type=EST; length=874bp
GGGGCAGCAAAAGAGTTCTCAATTGTTAAATTTCTGTTTCATTTCCTGTG
TGTATATATAATTCATTTCAAGAAATTGAAGCAATACATGATGATTTCAT
CGATGGATTCGCAGGGGGTATGGGAATTGGAAAATGGAGGCCGTATCGAT
AGCTCAAGTAAGGAGATAATTCGGAATAATAATAACAATGATAATAGCAA
TGAAGCTGCAAAAACTACACAAATTGTGTCGACTCCGATTATGCGAAAGA
AATCGGATCCATTGCTTGTTTCAAATGTTCGGTTCAGAATCCTGAGAGAA
TTTTTAGCAAATTTGCGAGAGGTTATTCTTGGCACCAGGCTTGCTTTGCT
CTTCCCGGCCGTTCCTCCGGCTGTTATTGCTCGCCTCAATAACTTCGGAA
GACCGTGGGTATTTGCTTTGAGTTTGCTTGGTCTCGCTCCACTGGCTGAG
CGTGTCAGCTTCCTTACCGAACAAATTGCCTATTTCACCGGCCCAACAGT
TGGGGGACTTATGAATGCAACATGTGGTAATGCGACGGAGCTGGTAATAG
CATTATTTGCTCTCTACGAGAACAAAATTCATGTGCTGAAGTACTCGCTC
TTGGGTTCCGTTCTCTCGAACCTGCTCCTTGTTCTTGGGACCTCTCTTCT
CTGTGGAGGCTTGGCCAACATCAGAGAGGAGCAAAGATATGATAGAAAGC
AGGCTGATGTGAACTCATTACTTCTGTTGCTGGGATTGCTGTGCCAAATG
CTGCCACTGTTGTTCAGATATGCTGCAGAGCCGGGCACTTTCCCTGCCGA
TTCTATACTTCAATTGTCAAGAGCTAGCAGCATTCTTATGCTTCTCGCAT
ATGTTGCTTACATTTTTTTCCAGT
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