CK935824

Overview
NameCK935824
Unique NameCK935824
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length817
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935824 vs. ExPASy Swiss-Prot
Match: CHAC2_DANRE (Cation transport regulator-like protein 2 OS=Danio rerio GN=chac2 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.866e-29
Identity = 73/179 (40.78%), Postives = 101/179 (56.42%), Query Frame = 3
Query:  183 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKPQETICWGVAYCVRGGPKKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHE--DDYIIELANEVRK 713
            WVFGYGSL+W   F Y++K +GF+K + R F     DHRG P  P R  TL +  E   WGVAY +  G ++E    EYL+ RE        V F+ + E  QP +   +++  + D   N  YLGPAPLE +A+QI  +VGP G N DYLF+L  A+  +  E  DD++  L   V++
Sbjct:    2 WVFGYGSLIWKVDFPYEDKRVGFVKGFSRRFWQGSTDHRGVPGKPGRVVTLIEDPEGCVWGVAYKLPSGQEQE--VKEYLDYREKGGYGVITVTFHPKDEQQQP-MQDTLLYIGSCD---NPNYLGPAPLETIAQQIVKSVGPSGKNTDYLFELADALRQLVPEDLDDHLFSLERLVKQ 174          
BLAST of CK935824 vs. ExPASy Swiss-Prot
Match: CHAC2_XENLA (Cation transport regulator-like protein 2 OS=Xenopus laevis GN=chac2 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 9.803e-28
Identity = 75/179 (41.90%), Postives = 99/179 (55.31%), Query Frame = 3
Query:  183 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKPQETICWGVAYCVRGGPKKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHE--DDYIIELANEVRK 713
            WVFGYGSL+W   F Y EK++G+I  Y R F     DHRG P  P R  TL +  E   WGVAY +  G  KE     YL+ RE      + V FY +    QP    V+++  T D   N  YLGPAPLE++A QI  AVGP G N +YLF+L  ++ ++  E  D+++  L   VR+
Sbjct:    2 WVFGYGSLIWKVDFPYVEKLVGYIMCYSRRFWQGSTDHRGVPGKPGRVVTLVEDPEGCVWGVAYRLPEG--KEEEVKAYLDFREKGGYRTSTVVFYPKDPSIQP--FNVLLYIGTCD---NPNYLGPAPLEDIAEQILNAVGPSGRNTEYLFELANSLRNLVPEDADEHLFSLEKLVRQ 173          
BLAST of CK935824 vs. ExPASy Swiss-Prot
Match: CHAC2_CHICK (Cation transport regulator-like protein 2 OS=Gallus gallus GN=chac2 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.280e-27
Identity = 73/165 (44.24%), Postives = 93/165 (56.36%), Query Frame = 3
Query:  183 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKPQETICWGVAYCVRGGPKKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHED 677
            WVFGYGSL+W   F Y EK++G I+ Y R F     DHRG P  P R  TL +  E   WGVAY +  G + E  A  YL+ RE      T V FY +    +P    V+++  T D   N  YLGPAPL+E+A QI  AVGP G N +YLF+L  +M ++  ED
Sbjct:    2 WVFGYGSLIWKVDFPYQEKMVGRIRGYSRRFWQGSTDHRGVPGKPGRVVTLVEDPEGCVWGVAYRLPAGQECEVKA--YLDFREKGGYRTTTVVFYPKDSSIKP--FDVLLYIGTRD---NPNYLGPAPLQEIAEQIIDAVGPSGRNTEYLFELANSMRNLVPED 159          
BLAST of CK935824 vs. ExPASy Swiss-Prot
Match: CHAC2_HUMAN (Cation transport regulator-like protein 2 OS=Homo sapiens GN=CHAC2 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 6.354e-27
Identity = 72/181 (39.78%), Postives = 100/181 (55.25%), Query Frame = 3
Query:  183 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKPQETICWGVAYCVRGGPKKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHE--DDYIIELANEVRKEL 719
            WVFGYGSL+W   F Y +K++G+I +Y R F     DHRG P  P R  TL +      WGVAY +  G  KE     YL+ RE      T V FY +   ++P    V+++  T D   N  YLGPAPLE++A QI  A GP G N +YLF+L  ++ ++  E  D+++  L   V++ L
Sbjct:    2 WVFGYGSLIWKVDFPYQDKLVGYITNYSRRFWQGSTDHRGVPGKPGRVVTLVEDPAGCVWGVAYRLPVG--KEEEVKAYLDFREKGGYRTTTVIFYPKDPTTKP--FSVLLYIGTCD---NPDYLGPAPLEDIAEQIFNAAGPSGRNTEYLFELANSIRNLVPEEADEHLFALEKLVKERL 175          
BLAST of CK935824 vs. ExPASy Swiss-Prot
Match: CHAC2_RAT (Cation transport regulator-like protein 2 OS=Rattus norvegicus GN=Chac2 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.084e-26
Identity = 72/181 (39.78%), Postives = 99/181 (54.70%), Query Frame = 3
Query:  183 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKPQETICWGVAYCVRGGPKKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHE--DDYIIELANEVRKEL 719
            WVFGYGSL+W   F Y +K++G+I +Y R F     DHRG P  P R  TL +      WGVAY +  G  KE     YL+ RE      T V FY +   ++P    V+++  T D   N  YLGPAPLE++A QI  A GP G N +YLF+L  ++  +  E  D+++  L   V++ L
Sbjct:    2 WVFGYGSLIWKVDFPYQDKLVGYITNYSRRFWQGSTDHRGVPGKPGRVVTLVEDPGGSVWGVAYKLPVG--KEEEVKTYLDFREKGGYRTTTVIFYPKDSTTKP--FSVLLYIGTCD---NPNYLGPAPLEDIAEQIFNAAGPSGRNTEYLFELADSIRKLVPEDADEHLFSLEKLVKERL 175          
BLAST of CK935824 vs. ExPASy Swiss-Prot
Match: CHAC2_MOUSE (Cation transport regulator-like protein 2 OS=Mus musculus GN=Chac2 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.084e-26
Identity = 72/181 (39.78%), Postives = 99/181 (54.70%), Query Frame = 3
Query:  183 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKPQETICWGVAYCVRGGPKKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHE--DDYIIELANEVRKEL 719
            WVFGYGSL+W   F Y +K++G+I +Y R F     DHRG P  P R  TL +      WGVAY +  G  KE     YL+ RE      T V FY +   ++P    V+++  T D   N  YLGPAPLE++A QI  A GP G N +YLF+L  ++  +  E  D+++  L   V++ L
Sbjct:    2 WVFGYGSLIWKVDFPYQDKLVGYITNYSRRFWQGSTDHRGVPGKPGRVVTLVEDPGGSVWGVAYKLPVG--KEEEVKTYLDFREKGGYRTTTVIFYPKDSTTKP--FSVLLYIGTCD---NPNYLGPAPLEDIAEQIFNAAGPSGRNTEYLFELADSVRKLVPEDADEHLFSLEKLVKERL 175          
BLAST of CK935824 vs. ExPASy Swiss-Prot
Match: CHAC1_MOUSE (Cation transport regulator-like protein 1 OS=Mus musculus GN=Chac1 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.855e-24
Identity = 68/161 (42.24%), Postives = 87/161 (54.04%), Query Frame = 3
Query:  183 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKPQETICWGVAYCVRGGPKKERLAMEYLERREC---EYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAM 656
            W+FGYGSLVW P F Y +  +GF++ Y R F      HRG+ + P R  TL +  E   WGVAY VRG    E  A++YL  RE     YD+K  V FY +  P QP     + + +TP    N  YLGPAP E +A QI    G  G+N +YL +L   M
Sbjct:   35 WIFGYGSLVWKPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMPGRVVTLLEDHEGCTWGVAYQVRGEQVNE--ALKYLNVREAVLGGYDTKE-VTFYPQDTPDQPLT--ALAYVATP---QNPGYLGPAPEEVIATQILACRGFSGHNLEYLLRLADFM 187          
BLAST of CK935824 vs. ExPASy Swiss-Prot
Match: CHAC2_BOVIN (Cation transport regulator-like protein 2 OS=Bos taurus GN=CHAC2 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.913e-23
Identity = 69/181 (38.12%), Postives = 94/181 (51.93%), Query Frame = 3
Query:  183 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKPQETICWGVAYCVRGGPKKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIGHE--DDYIIELANEVRKEL 719
            WVFGYGSL+W   F Y +K++G+I  Y R F     DHRG P   +             WGVAY +  G  KE     YL+ RE      T V FY +   ++P    V+++  T D   N  YLGPAPLE++A QI  A GP G N +YLF+L  +M  +  E  D+++  L   V++ L
Sbjct:    2 WVFGYGSLIWKVDFPYQDKLVGYISGYSRRFWQGSTDHRGVPGKGS------------VWGVAYKLPVG--KEEEVKAYLDFREKGGYRTTTVIFYPKDSTTEP--FSVLLYIGTRD---NPNYLGPAPLEDIAEQIFNAAGPSGKNTEYLFELANSMRSLVPEDADEHLFSLEKLVKERL 163          
BLAST of CK935824 vs. ExPASy Swiss-Prot
Match: CHAC1_HUMAN (Cation transport regulator-like protein 1 OS=Homo sapiens GN=CHAC1 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.913e-23
Identity = 69/180 (38.33%), Postives = 97/180 (53.89%), Query Frame = 3
Query:  183 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKPQETICWGVAYCVRGGPKKERLAMEYLERREC---EYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIG--HEDDYIIELANEV 707
            W+FGYGSLVW P F Y +  +GF++ Y R F      HRG+ + P R  TL +  E   WGVAY V+G  ++   A++YL  RE     YD+K  V FY +  P QP     + + +TP    N  YLGPAP E +A QI    G  G+N +YL +L   M   G   +D+++  + + V
Sbjct:   34 WIFGYGSLVWRPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMPGRVVTLLEDHEGCTWGVAYQVQG--EQVSKALKYLNVREAVLGGYDTKE-VTFYPQDAPDQP--LKALAYVATP---QNPGYLGPAPEEAIATQILACRGFSGHNLEYLLRLADFMQLCGPQAQDEHLAAIVDAV 205          
BLAST of CK935824 vs. ExPASy Swiss-Prot
Match: CHAC1_DANRE (Cation transport regulator-like protein 1 OS=Danio rerio GN=chac1 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.499e-23
Identity = 65/164 (39.63%), Postives = 87/164 (53.05%), Query Frame = 3
Query:  171 KMVFWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKPQETICWGVAYCVRGGPKKERLAMEYLERRECEYDS--KTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLEKAM 656
            K   W+FGYGSLVW P F+Y    +G+IK Y+R F      HRG  + P R  TL +  +   WGVA+ V G   +E  +++YL  RE          VDF+  G    P     +V+ +TPD   N  YLGPA  EE+A QIA   G  G+N +YL +L + M
Sbjct:   10 KSSLWIFGYGSLVWKPDFKYKRSKVGYIKGYKRRFWHGDNFHRGDDEMPGRVVTLIEEDDVCTWGVAFEVTGSQMEE--SLKYLNVREAVRGGYLTRAVDFFPRGTNQPP--VQALVYIATPD---NPIYLGPASTEEIASQIAVCKGNSGHNIEYLLRLAEFM 166          
The following BLAST results are available for this feature:
BLAST of CK935824 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
CHAC2_DANRE8.866e-2940.78Cation transport regulator-like protein 2 OS=Danio... [more]
CHAC2_XENLA9.803e-2841.90Cation transport regulator-like protein 2 OS=Xenop... [more]
CHAC2_CHICK1.280e-2744.24Cation transport regulator-like protein 2 OS=Gallu... [more]
CHAC2_HUMAN6.354e-2739.78Cation transport regulator-like protein 2 OS=Homo ... [more]
CHAC2_RAT1.084e-2639.78Cation transport regulator-like protein 2 OS=Rattu... [more]
CHAC2_MOUSE1.084e-2639.78Cation transport regulator-like protein 2 OS=Mus m... [more]
CHAC1_MOUSE3.855e-2442.24Cation transport regulator-like protein 1 OS=Mus m... [more]
CHAC2_BOVIN1.913e-2338.12Cation transport regulator-like protein 2 OS=Bos t... [more]
CHAC1_HUMAN1.913e-2338.33Cation transport regulator-like protein 1 OS=Homo ... [more]
CHAC1_DANRE2.499e-2339.63Cation transport regulator-like protein 1 OS=Danio... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004390_C06 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IVF_C06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935824 ID=CK935824; Name=CK935824; organism=Citrus sinensis; type=EST; length=817bp
GGGGGCTCGTGTCTCCATTGCACCCACACGAGAGACGGGGAGAGAGAGNN
NGAGAGAGGAAGCGAAGAGAAATAGAAAGAGAGAATACAGAATCCTAACC
TTAGGCGTTTTAGCTTGTTTCGTTTCCCTCTTTTGCTTCAAGTTTCTTCC
TTTCTCTCGCGATTTCCTTGAAAATGGTGTTCTGGGTTTTTGGGTATGGA
TCATTGGTGTGGAACCCAGGGTTTGAATATGATGAGAAAATTTTAGGCTT
CATCAAGGACTACAGGCGCGTGTTTGATCTTGCATGCATTGATCACAGGG
GTACACCTCAACACCCGGCTAGAACTTGCACGCTGGAAAAACCTCAAGAA
ACCATTTGTTGGGGTGTTGCTTATTGTGTCCGAGGAGGTCCTAAAAAGGA
AAGACTCGCTATGGAGTATTTGGAACGAAGAGAATGCGAGTACGACTCTA
AGACCCTTGTAGACTTTTACAGGGAAGGGGAGCCTTCACAGCCGGCTCTA
ACTGGGGTTATAGTTTTCACGTCTACTCCAGACAAAGTATCAAACAAGTA
TTATCTGGGGCCTGCTCCATTGGAGGAAATGGCTAGGCAAATTGCAACGG
CTGTCGGACCCTGTGGAAACAATAGAGACTACCTTTTCAAGTTGGAGAAG
GCCATGTTTGATATTGGTCATGAGGACGACTACATAATAGAGCTGGCAAA
TGAAGTGAGGAAAGAGCTTGGAACTGCTGAAAAAGGAATTCTCAAGGAGA
GGAAGTTGGTTGGGTCATCATCCCGCATGCCGCTCACAAAATCTNNTATT
CCAACCCTTTCACTGGG
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