CK935868

Overview
NameCK935868
Unique NameCK935868
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length927
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: ALLB3_BETVE (Calcium-binding allergen Bet v 3 OS=Betula verrucosa GN=BETVIII PE=1 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 4.216e-57
Identity = 115/173 (66.47%), Postives = 138/173 (79.77%), Query Frame = 1
Query:  403 SLNTLRLRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMMQSVLVRSS 921
            SLNTLRLRR+FD+FDKN DG+ITV EL +ALNLLGLETDLSELEST+ S  + GN GL FEDF+SLH+SL++++F           + ++  K +LSQEEAD    FKVFDEDGDG+ISA ELQ+VLGKLG +EG+EI RV +MI SVD N DGRVDFFEFK+MM+SVLVRSS
Sbjct:   35 SLNTLRLRRIFDLFDKNSDGIITVDELSRALNLLGLETDLSELESTVKSFTREGNIGLQFEDFISLHQSLNDSYFAYGG--EDEDDNEEDMRKSILSQEEADSFGGFKVFDEDGDGYISARELQMVLGKLGFSEGSEIDRVEKMIVSVDSNRDGRVDFFEFKDMMRSVLVRSS 205          
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: CML42_ARATH (Calcium-binding protein CML42 OS=Arabidopsis thaliana GN=CML42 PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.828e-53
Identity = 106/174 (60.92%), Postives = 135/174 (77.59%), Query Frame = 1
Query:  400 PSLNTLRLRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMMQSVLVRSS 921
            PSLN LRL+R+FD+FDKNGDG ITV+EL QAL  LGL  DLS+L+ST+ S+++PGN GL+F+DF SLH++LD++FF             +E +    ++ E+DL+EAFKVFDE+GDGFISA ELQ VL KLGL EG E+ RV +MI SVDRN DGRVDFFEFKNMM++V++ SS
Sbjct:   23 PSLNALRLQRIFDLFDKNGDGFITVEELSQALTRLGLNADLSDLKSTVESYIQPGNTGLNFDDFSSLHKTLDDSFFG-----GACGGGENEDDPSSAAENESDLAEAFKVFDENGDGFISARELQTVLKKLGLPEGGEMERVEKMIVSVDRNQDGRVDFFEFKNMMRTVVIPSS 191          
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: CAST_SOLTU (Calcium-binding protein CAST OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 8.514e-50
Identity = 103/173 (59.54%), Postives = 132/173 (76.30%), Query Frame = 1
Query:  400 PSLNTLRLRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMMQSVLVRS 918
            PSLN++RLRR+FD+FD+N D +I+V+EL QALNLLGL+ DLSE+ES +  H+KP N GL FEDF +LH SL++ FF        +  +   G     +Q+E+DL EAF VFDE+GDGFISA ELQVVL KLGL EG+EI RV  MI SV+++HDGRVDFFEFK+MM++V+V S
Sbjct:   34 PSLNSIRLRRIFDVFDRNHDCLISVEELSQALNLLGLDADLSEIESMVKLHIKPENTGLRFEDFETLHRSLNDVFFG-------SKCEDKLGLNPDPAQDESDLKEAFDVFDENGDGFISAKELQVVLEKLGLPEGSEIDRVEMMISSVEQDHDGRVDFFEFKDMMRTVIVPS 199          
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: CML43_ARATH (Probable calcium-binding protein CML43 OS=Arabidopsis thaliana GN=CML43 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.577e-48
Identity = 105/173 (60.69%), Postives = 124/173 (71.68%), Query Frame = 1
Query:  400 PSLNTLRLRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMMQSVLVRS 918
            PSLN LRL RVFD+FDKN DG ITV+EL QAL+ LGL+ D S+L+ST+ S +KP   GL F+DF +LH++LDE+FF              EG+       E+DL EAF VFDEDGDGFISA ELQ VL KLGL E  EI +V +MI SVD NHDGRVDFFEFKNMMQ+V+V S
Sbjct:   22 PSLNALRLHRVFDLFDKNNDGFITVEELSQALSRLGLDADFSDLKSTVDSFIKPDKTGLRFDDFAALHKTLDESFF------------GGEGSC-CDGSPESDLEEAFNVFDEDGDGFISAVELQKVLKKLGLPEAGEIEQVEKMIVSVDSNHDGRVDFFEFKNMMQTVVVPS 181          
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: CML32_ORYSJ (Probable calcium-binding protein CML32 OS=Oryza sativa subsp. japonica GN=CML32 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.585e-40
Identity = 92/170 (54.12%), Postives = 112/170 (65.88%), Query Frame = 1
Query:  403 SLNTLRLRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMMQSVLV 912
            SLN +RLRRVFD+FD+NGDG ITV EL QAL+ LGL  D   L +T++++V  G  GL FEDF +LH +L +  F   D  +        G       EE ++ EAFKVFD DGDGFISA ELQ VL KLGL E   +A V +MI +VDRN DGRVDF EFK+MMQ + V
Sbjct:   29 SLNAVRLRRVFDLFDRNGDGEITVDELAQALDALGLVADRDGLAATVSAYVPEGAAGLRFEDFDALHRALGDALFGSLDGAAAAGEPGGGGG-----DEEEEMREAFKVFDVDGDGFISASELQEVLKKLGLPEAGSLATVREMICNVDRNSDGRVDFGEFKSMMQGITV 193          
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: CML24_ORYSJ (Probable calcium-binding protein CML24 OS=Oryza sativa subsp. japonica GN=CML24 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.362e-39
Identity = 93/170 (54.71%), Postives = 113/170 (66.47%), Query Frame = 1
Query:  403 SLNTLRLRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMMQSVLV 912
            SLN +RLRRVFD+FD+NGDG ITV EL QAL+ LGLE D + L +T+ +HV  G  GL FEDF SLH +L +  F   D+        ++G       EE  + EAFKVFD DGDGFISA ELQ VL KLG+ E   +A V +MI +VDR+ DGRVDF EFK MMQ + V
Sbjct:   34 SLNAVRLRRVFDLFDRNGDGEITVDELAQALDALGLEADRAGLAATVGAHVPDGAAGLRFEDFESLHRALGDALFGSLDV-------PEDGGGGGGGDEE--MKEAFKVFDVDGDGFISASELQEVLKKLGMPEAGSLANVREMICNVDRDSDGRVDFGEFKCMMQGITV 194          
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: CML27_ORYSJ (Probable calcium-binding protein CML27 OS=Oryza sativa subsp. japonica GN=CML27 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.324e-39
Identity = 88/170 (51.76%), Postives = 112/170 (65.88%), Query Frame = 1
Query:  403 SLNTLRLRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMMQSVLV 912
            SLN LRLRRVFD+FD+NGDG IT+ E+  AL+ LGL  D + LE+T+  ++  G  GL F DF +LH +L +  F           + +E  K+    +E D+ EAF+VFDEDGDGFISA ELQ VL KLGL E   +A V +MI +VDR+ DGRVDF EFK MMQ + V
Sbjct:   26 SLNALRLRRVFDLFDRNGDGEITLDEMASALDALGLGADRAGLEATVGGYIPAGAAGLRFGDFEALHRALGDALFG--------PVEEEEPGKQGEDDDEGDMKEAFRVFDEDGDGFISAAELQAVLKKLGLPEARNLATVQEMICNVDRDCDGRVDFGEFKCMMQGITV 187          
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: CML21_ORYSJ (Probable calcium-binding protein CML21 OS=Oryza sativa subsp. japonica GN=CML21 PE=2 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 1.510e-30
Identity = 78/166 (46.99%), Postives = 105/166 (63.25%), Query Frame = 1
Query:  412 TLRLRRVFDMFDKNGDGMITVKELHQALNLLGLETDL----SELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMM 897
            TLRLRRVF+MFD++GDG+IT  EL  AL  LG   +     + L++ +A+++ PG  GL F +F +LH  L      L    +    +A+E       ++EAD+ EAF VFDEDGDG+ISA ELQ VL ++GL E   +ARV  MI + DR+ DGRVD+ EFK MM
Sbjct:   39 TLRLRRVFEMFDRDGDGVITPAELSGALCRLGARGEAPPAAAALDAVVAAYIAPGMAGLRFAEFEALHAELAG----LGGRQAVAAAEAEE-------EKEADMREAFGVFDEDGDGYISAAELQAVLSRMGLPEAACMARVRDMIAAADRDSDGRVDYEEFKAMM 193          
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: CML22_ORYSJ (Probable calcium-binding protein CML22 OS=Oryza sativa subsp. japonica GN=CML22 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.557e-25
Identity = 67/161 (41.61%), Postives = 91/161 (56.52%), Query Frame = 1
Query:  421 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEE-ADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMMQ 900
            L RVF++FD+NGDG IT +EL  +L  LG+     EL + IA     G+  +D E+F  L+ S+                D+ +G  K   +EE  D+ EAF+VFD +GDG+I+  EL  VL  LGL +G       +MIG VDR+ DGRVDF EF  MM+
Sbjct:   93 LARVFELFDRNGDGRITREELEDSLGKLGIPVPADELAAVIARIDANGDGCVDVEEFGELYRSI-----------MAGGDDSKDGRAKEEEEEEDGDMREAFRVFDANGDGYITVDELGAVLASLGLKQGRTAEECRRMIGQVDRDGDGRVDFHEFLQMMR 242          
BLAST of CK935868 vs. ExPASy Swiss-Prot
Match: CML17_ORYSJ (Probable calcium-binding protein CML17 OS=Oryza sativa subsp. japonica GN=CML17 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.557e-25
Identity = 66/160 (41.25%), Postives = 89/160 (55.62%), Query Frame = 1
Query:  421 LRRVFDMFDKNGDGMITVKELHQALNLLGLETDLSELESTIASHVKPGNDGLDFEDFVSLHESLDETFFPLNDLTSTTTTDADEGNKKVLSQEEADLSEAFKVFDEDGDGFISAHELQVVLGKLGLTEGNEIARVLQMIGSVDRNHDGRVDFFEFKNMMQ 900
            LRRVF++FD++GDG IT +EL ++L  LG+     EL +TIA     G+  +D ++F  L+E            T         G       +EA + EAF VFD +GDGFI+  EL  VL  LG+ +G       +MIG VDR+ DGRVDF EFK MM+
Sbjct:    9 LRRVFELFDRDGDGRITREELTESLERLGMPVHREELAATIARIDANGDGCVDMDEFTQLYE------------TVMRVDGGGGGGGGACDVDEASMREAFDVFDRNGDGFITVDELGAVLASLGIKQGRTAEDCGRMIGQVDRDGDGRVDFLEFKQMMR 156          
The following BLAST results are available for this feature:
BLAST of CK935868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 184
Match NameE-valueIdentityDescription
ALLB3_BETVE4.216e-5766.47Calcium-binding allergen Bet v 3 OS=Betula verruco... [more]
CML42_ARATH2.828e-5360.92Calcium-binding protein CML42 OS=Arabidopsis thali... [more]
CAST_SOLTU8.514e-5059.54Calcium-binding protein CAST OS=Solanum tuberosum ... [more]
CML43_ARATH3.577e-4860.69Probable calcium-binding protein CML43 OS=Arabidop... [more]
CML32_ORYSJ3.585e-4054.12Probable calcium-binding protein CML32 OS=Oryza sa... [more]
CML24_ORYSJ1.362e-3954.71Probable calcium-binding protein CML24 OS=Oryza sa... [more]
CML27_ORYSJ2.324e-3951.76Probable calcium-binding protein CML27 OS=Oryza sa... [more]
CML21_ORYSJ1.510e-3046.99Probable calcium-binding protein CML21 OS=Oryza sa... [more]
CML22_ORYSJ5.557e-2541.61Probable calcium-binding protein CML22 OS=Oryza sa... [more]
CML17_ORYSJ5.557e-2541.25Probable calcium-binding protein CML17 OS=Oryza sa... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004389_G07 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IIIF_G07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935868 ID=CK935868; Name=CK935868; organism=Citrus sinensis; type=EST; length=927bp
GGGGGAAAGGAGAACGAGTGGAACGAAGCCCAACAATTGGAAGAAAAAAG
AAATGGTCACAAGTGACATCCCACATGGACTGCAATTGCCCAAATCCCCC
AATATACAGCCTTAACGCCGCCGAACGCGTATCATCCCACATATTATAGT
CAATGAAACTTGAAATTTTTTCCATATTTGTGTAAACCTGTTAACCCTTC
TTCTTCCCCATACTCCCAAAAAGCTCGTTCATTCTTCTTCTTCTTCTGTC
TCTCGGGGATCATCAACTGCCTGCAACTACGTCCTTCGTTTAAAAACACA
ATGGAAGTAGCTGCAGCAGCAGGCCCCGGGGCAACTCCTACAGAAAAGCG
CCGCTGGAGCAGGAGGCCATCATCTTCCAGCTCCTTCCGATTACGTTGCC
CCAGCCTCAACACACTCCGTCTCCGCCGCGTATTCGACATGTTTGACAAA
AACGGCGACGGGATGATCACCGTCAAGGAGCTTCACCAGGCACTCAACCT
TCTCGGACTCGAAACCGACCTCTCGGAGCTAGAATCCACCATCGCCTCCC
ACGTCAAGCCCGGCAATGACGGCCTTGACTTTGAAGATTTTGTATCCTTG
CATGAATCTTTAGATGAAACTTTTTTTCCATTAAATGATCTGACATCAAC
CACGACAACTGATGCTGACGAGGGGAACAAGAAGGTACTGTCGCAGGAGG
AGGCCGACTTGTCGGAGGCGTTTAAGGTGTTTGATGAGGACGGAGACGGA
TTCATTTCTGCACACGAGTTGCAAGTGGTTTTGGGGAAGCTAGGCTTGAC
CGAAGGCAATGAAATTGCCAGAGTTCTGCAGATGATTGGCTCCGTTGACC
GCAACCATGATGGCCGCGTTGACTTCTTCGAATTCAAGAACATGATGCAG
AGCGTTCTTGTTCGAAGTTCTNGATCT
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