CK935871
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935871 vs. ExPASy Swiss-Prot
Match: RL24_PRUAV (60S ribosomal protein L24 OS=Prunus avium GN=RPL24 PE=2 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 4.314e-47 Identity = 91/96 (94.79%), Postives = 95/96 (98.96%), Query Frame = 3 Query: 69 MVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKRHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKR 356 MVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWT+MYRK+HKKDIA EAVKK+RR+TKKPYSRSIVGATLEVIQKR Sbjct: 1 MVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKR 96
BLAST of CK935871 vs. ExPASy Swiss-Prot
Match: RL24_HORVU (60S ribosomal protein L24 OS=Hordeum vulgare GN=RPL24 PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.534e-44 Identity = 86/96 (89.58%), Postives = 92/96 (95.83%), Query Frame = 3 Query: 69 MVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKRHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKR 356 MVLKTELCRFSG KIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKP+KL WT+MYRK+HKKDI AEA KK+RR+TKKPYSRSIVGATLEVIQK+ Sbjct: 1 MVLKTELCRFSGQKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPAKLCWTAMYRKQHKKDIHAEAAKKRRRTTKKPYSRSIVGATLEVIQKK 96
BLAST of CK935871 vs. ExPASy Swiss-Prot
Match: RL24_CICAR (60S ribosomal protein L24 OS=Cicer arietinum GN=RPL24 PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 2.004e-44 Identity = 85/96 (88.54%), Postives = 92/96 (95.83%), Query Frame = 3 Query: 69 MVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKRHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKR 356 MVLKTELCRFSGAKIYPG+GIRFIR DSQVFLF NSKCKRYFHNRLKPSKLTWT+M+RK+HKKD A EAVKK+RR+TKKPYSRSIVGATLEVIQK+ Sbjct: 1 MVLKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKK 96
BLAST of CK935871 vs. ExPASy Swiss-Prot
Match: RL242_ARATH (60S ribosomal protein L24-2 OS=Arabidopsis thaliana GN=RPL24B PE=2 SV=2) HSP 1 Score: 176.022 bits (445), Expect = 2.215e-43 Identity = 83/96 (86.46%), Postives = 91/96 (94.79%), Query Frame = 3 Query: 69 MVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKRHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKR 356 MVLKTELCRFSG KIYPG+GIRFIRSDSQVFLF NSKCKRYFHN+LKPSKL WT+MYRK+HKKD A EAVK++RR+TKKPYSRSIVGATLEVIQK+ Sbjct: 1 MVLKTELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLAWTAMYRKQHKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKK 96
BLAST of CK935871 vs. ExPASy Swiss-Prot
Match: RL241_ARATH (60S ribosomal protein L24-1 OS=Arabidopsis thaliana GN=RPL24A PE=1 SV=2) HSP 1 Score: 176.022 bits (445), Expect = 2.215e-43 Identity = 91/154 (59.09%), Postives = 116/154 (75.32%), Query Frame = 3 Query: 69 MVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKRHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRGLKSLKFEMLLVRLHFVKLRRGSRRPKMKRGPRKLR*HPSQRLKARVACPRVPLRRAP 530 MVLKTELCRFSG KIYPG+GIRFIRSDSQVFLF NSKCKRYFHN+LKPSKL WT+MYRK+HKKD A EAVK++RR+TKKPYSRSIVGATLEVIQK+ + + +++ ++ K ++ +K+ + S++ K++V +P AP Sbjct: 1 MVLKTELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLCWTAMYRKQHKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERIKKTKDEKKAKKVE-YASKQQKSQVK-GNIPKSAAP 152
BLAST of CK935871 vs. ExPASy Swiss-Prot
Match: RL24B_SCHPO (60S ribosomal protein L24-B OS=Schizosaccharomyces pombe GN=rpl24b PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 9.972e-23 Identity = 45/94 (47.87%), Postives = 64/94 (68.09%), Query Frame = 3 Query: 75 LKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKRHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKR 356 +K E+C FSG+K+YPG G F+R D++VF F N K + F R P +L+WT +YR+ HKK I+ E KK+ R T K + R IVGA L+VI+++ Sbjct: 1 MKVEVCSFSGSKVYPGAGRLFVRGDNKVFRFVNKKSESLFLQRKNPRRLSWTVLYRRMHKKGISEEHAKKRTRRTVK-HQRGIVGANLDVIKEK 93 HSP 2 Score: 31.9574 bits (71), Expect = 9.972e-23 Identity = 15/30 (50.00%), Postives = 22/30 (73.33%), Query Frame = 2 Query: 332 NLGSHTEERTEKPEVRDAAREAALREIKER 421 NL E+R ++PEVR AAR AAL++ K++ Sbjct: 86 NLDVIKEKRNQRPEVRAAARAAALKQRKDK 115
BLAST of CK935871 vs. ExPASy Swiss-Prot
Match: RL24A_SCHPO (60S ribosomal protein L24-A OS=Schizosaccharomyces pombe GN=rpl24a PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 9.972e-23 Identity = 45/94 (47.87%), Postives = 64/94 (68.09%), Query Frame = 3 Query: 75 LKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKRHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKR 356 +K E+C FSG+K+YPG G F+R D++VF F N K + F R P +L+WT +YR+ HKK I+ E KK+ R T K + R IVGA L+VI+++ Sbjct: 1 MKVEVCSFSGSKVYPGAGRLFVRGDNKVFRFVNKKSESLFLQRKNPRRLSWTVLYRRMHKKGISEEHAKKRTRRTVK-HQRGIVGANLDVIKEK 93 HSP 2 Score: 31.9574 bits (71), Expect = 9.972e-23 Identity = 15/30 (50.00%), Postives = 22/30 (73.33%), Query Frame = 2 Query: 332 NLGSHTEERTEKPEVRDAAREAALREIKER 421 NL E+R ++PEVR AAR AAL++ K++ Sbjct: 86 NLDVIKEKRNQRPEVRAAARAAALKQRKDK 115
BLAST of CK935871 vs. ExPASy Swiss-Prot
Match: RL24_DEBHA (60S ribosomal protein L24 OS=Debaryomyces hansenii GN=RPL24 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.044e-21 Identity = 46/94 (48.94%), Postives = 67/94 (71.28%), Query Frame = 3 Query: 75 LKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKRHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKR 356 +K EL FSG KIYPG+G F+R DS++F F +SK FH R P +++WT +YR++HKK I+ E+ K++ R T K R+IVGA+LE+I++R Sbjct: 1 MKVELDSFSGTKIYPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRISWTVLYRRQHKKGISEESAKRRTRKTVK-NQRAIVGASLELIKER 93 HSP 2 Score: 24.2534 bits (51), Expect = 3.044e-21 Identity = 11/23 (47.83%), Postives = 15/23 (65.22%), Query Frame = 2 Query: 350 EERTEKPEVRDAAREAALREIKE 418 E R++KP R AAR+ L + KE Sbjct: 92 ERRSQKPSDRKAARDVKLAKDKE 114
BLAST of CK935871 vs. ExPASy Swiss-Prot
Match: RL24_ASHGO (60S ribosomal protein L24 OS=Ashbya gossypii GN=RPL24 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.183e-20 Identity = 51/103 (49.51%), Postives = 70/103 (67.96%), Query Frame = 3 Query: 75 LKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKRHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRGLKSLKFEM 383 +K E+ FSGAKIYPG+G F+R DS+VF F +SK FH R P ++ WT +YR+ HKK I E KK+ R T K R++VGA+LE+I++R +SLK E+ Sbjct: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKVFRFHSSKSASLFHQRKNPRRIAWTVLYRRHHKKGITEEVAKKRSRKTVKA-QRAVVGASLELIKER--RSLKPEI 100
BLAST of CK935871 vs. ExPASy Swiss-Prot
Match: RL24_DANRE (60S ribosomal protein L24 OS=Danio rerio GN=rpl24 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.920e-20 Identity = 45/98 (45.92%), Postives = 64/98 (65.31%), Query Frame = 3 Query: 75 LKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTSMYRKRHKKDIAAEAVKKKRRSTKKPYSRSIVGATL-EVIQKRGLK 365 +K ELC FSG KIYPG G R+ R D +VF F N+KC+ F ++ P ++ WT +YR++HKK + E KK+ R K + R+I GA+L E++ KR K Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARVDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEVSKKRTRRAVK-FQRAITGASLAEILAKRNQK 97 HSP 2 Score: 29.261 bits (64), Expect = 1.920e-20 Identity = 13/22 (59.09%), Postives = 16/22 (72.73%), Query Frame = 2 Query: 353 ERTEKPEVRDAAREAALREIKE 418 +R +KPEVR A RE A+R KE Sbjct: 93 KRNQKPEVRKAQREQAIRAAKE 114 The following BLAST results are available for this feature:
BLAST of CK935871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935871 ID=CK935871; Name=CK935871; organism=Citrus sinensis; type=EST; length=825bpback to top |