CK935876

Overview
NameCK935876
Unique NameCK935876
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length840
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935876 vs. ExPASy Swiss-Prot
Match: NDK1_ARATH (Nucleoside diphosphate kinase 1 OS=Arabidopsis thaliana GN=NDPK1 PE=1 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 2.260e-67
Identity = 119/148 (80.41%), Postives = 133/148 (89.86%), Query Frame = 1
Query:  109 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGAANPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 552
            MEQTFIMIKPDGVQRGL+GE+I RFEKKGF+LKGLKL++V+R FAEKHYEDLSSK FF  L++YI SGPVVAMIWEG+ VV TGR IIGA NPA S PGTIRGD AI  GRN+IHGSDSVESA+KEIALWFPDGP+NWQSS+HPW+YE
Sbjct:    1 MEQTFIMIKPDGVQRGLIGEVICRFEKKGFTLKGLKLISVERSFAEKHYEDLSSKSFFSGLVDYIVSGPVVAMIWEGKNVVLTGRKIIGATNPAASEPGTIRGDFAIDIGRNVIHGSDSVESARKEIALWFPDGPVNWQSSVHPWVYE 148          
BLAST of CK935876 vs. ExPASy Swiss-Prot
Match: NDKB_FLABI (Nucleoside diphosphate kinase B OS=Flaveria bidentis PE=2 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 3.263e-66
Identity = 120/148 (81.08%), Postives = 131/148 (88.51%), Query Frame = 1
Query:  109 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGAANPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 552
            ME TFIMIKPDGVQRGLVGEII RFEKKGFSLKGLKL+TVD+ FAEKHY DLS+KPFF  L+EYI SGPVVAM+WEG+ VV TGR IIGA NPA+SAPGTIRGD AI  GRN+IHGSD+VESA+KEIALWFP+G  NW SSLHPWIYE
Sbjct:    1 MEHTFIMIKPDGVQRGLVGEIIGRFEKKGFSLKGLKLLTVDQAFAEKHYADLSAKPFFNGLVEYIISGPVVAMVWEGKNVVTTGRKIIGATNPAESAPGTIRGDFAIDIGRNVIHGSDAVESAKKEIALWFPEGVANWSSSLHPWIYE 148          
BLAST of CK935876 vs. ExPASy Swiss-Prot
Match: NDK1_TOBAC (Nucleoside diphosphate kinase 1 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 7.269e-66
Identity = 120/148 (81.08%), Postives = 131/148 (88.51%), Query Frame = 1
Query:  109 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGAANPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 552
            MEQTFIMIKPDGVQRGLVGEII RFEKKGFSLKGLKL+TVDR FAEKHY DLS+KPFF  L++YI SGPVVAM+WEG+GVV TGR IIGA NP +SAPGTIRGD AI  GRN+IHGSD+VESA+KEIALWFP+G   WQSSLH WIYE
Sbjct:    1 MEQTFIMIKPDGVQRGLVGEIIGRFEKKGFSLKGLKLITVDRAFAEKHYSDLSAKPFFNGLVDYIISGPVVAMVWEGKGVVTTGRKIIGATNPLESAPGTIRGDYAIDIGRNVIHGSDAVESARKEIALWFPEGVAEWQSSLHSWIYE 148          
BLAST of CK935876 vs. ExPASy Swiss-Prot
Match: NDKA_FLABI (Nucleoside diphosphate kinase A OS=Flaveria bidentis PE=2 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 9.494e-66
Identity = 120/148 (81.08%), Postives = 129/148 (87.16%), Query Frame = 1
Query:  109 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGAANPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 552
            MEQTFIMIKPDGVQ GLVGEII RFEKKGFSLKGLKL+TVDR FAEKHY DLSSKPFF  L+EYI SGPVVAM+WEG+ VV TGR IIGA NPA+SAPGTIRGD AI  GRN+IHGSD+VESA+K I LWFP+G  NW SSLHPWIYE
Sbjct:    1 MEQTFIMIKPDGVQSGLVGEIIGRFEKKGFSLKGLKLLTVDRAFAEKHYADLSSKPFFNGLVEYIVSGPVVAMVWEGKNVVTTGREIIGATNPAESAPGTIRGDFAIDIGRNVIHGSDAVESARKVIGLWFPEGVANWSSSLHPWIYE 148          
BLAST of CK935876 vs. ExPASy Swiss-Prot
Match: NDK1_MESCR (Nucleoside diphosphate kinase 1 OS=Mesembryanthemum crystallinum GN=NDKP1 PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.240e-65
Identity = 119/148 (80.41%), Postives = 128/148 (86.49%), Query Frame = 1
Query:  109 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGAANPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 552
            MEQTFIMIKPDGVQRGLVGEII RFEKKGFSLK LK + VDRPFAEKHY DLS+KPFF  L+EYI SGPVVAM+WEG+GVV TGR IIGA NP  S PGTIRGD AI  GRN+IHGSD+VESA KEIALWFP+G +NWQSSLH WIYE
Sbjct:    1 MEQTFIMIKPDGVQRGLVGEIISRFEKKGFSLKALKFINVDRPFAEKHYADLSAKPFFNGLVEYIVSGPVVAMVWEGKGVVLTGRKIIGATNPLASEPGTIRGDFAIDIGRNVIHGSDAVESATKEIALWFPEGVVNWQSSLHSWIYE 148          
BLAST of CK935876 vs. ExPASy Swiss-Prot
Match: NDK_HELAN (Nucleoside diphosphate kinase OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 2.115e-65
Identity = 118/148 (79.73%), Postives = 130/148 (87.84%), Query Frame = 1
Query:  109 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGAANPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 552
            MEQTFIMIKPDGVQRGLVGEII RFEKKGF+LKGLKL+TVD+ FAEKHY DLS+KPFF  L+EYI SGPVVAM+WEG+ VV TGR IIGA NPA+S PGTIRGD AI  GRN+IHGSD+VESA+KEI LWFP+G  NW SSLHPWIYE
Sbjct:    1 MEQTFIMIKPDGVQRGLVGEIIGRFEKKGFTLKGLKLLTVDQAFAEKHYADLSAKPFFNGLVEYIISGPVVAMVWEGKNVVTTGRKIIGATNPAESPPGTIRGDFAIDIGRNVIHGSDAVESAKKEIGLWFPEGVANWSSSLHPWIYE 148          
BLAST of CK935876 vs. ExPASy Swiss-Prot
Match: NDK_CAPAN (Nucleoside diphosphate kinase OS=Capsicum annuum PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.762e-65
Identity = 119/148 (80.41%), Postives = 131/148 (88.51%), Query Frame = 1
Query:  109 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGAANPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 552
            MEQTFIMIKPDGVQRGLVGEII RFEKKGFSLKGLKL+TVDR FAEKHY DLS+KPFF  L+EYI SGPVV+M+WEG+GV+ TGR IIGA NP +SAPGTIRGD AI  GRN+IHGSD+VESA+KEIALWFP+G   WQSSLH WIYE
Sbjct:    1 MEQTFIMIKPDGVQRGLVGEIIGRFEKKGFSLKGLKLITVDRAFAEKHYADLSAKPFFNGLVEYIVSGPVVSMVWEGKGVLTTGRKIIGATNPLESAPGTIRGDYAIDIGRNVIHGSDAVESARKEIALWFPEGVAEWQSSLHCWIYE 148          
BLAST of CK935876 vs. ExPASy Swiss-Prot
Match: NDK1_SPIOL (Nucleoside diphosphate kinase 1 OS=Spinacia oleracea GN=NDPK1 PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 4.712e-65
Identity = 117/148 (79.05%), Postives = 128/148 (86.49%), Query Frame = 1
Query:  109 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGAANPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 552
            MEQTFIMIKPDGVQRGLVGEII RFEKKGFSLK LK + VDRPFAEKHY DLS+KPFF  L+EYI SGPVVAM+WEG+GVV TGR +IGA NP  S PGTIRGD AI  GRN+IHGSD+V+SA KEIALWFPDG ++WQSSLH WIYE
Sbjct:    1 MEQTFIMIKPDGVQRGLVGEIISRFEKKGFSLKALKFVNVDRPFAEKHYADLSAKPFFNGLVEYIVSGPVVAMVWEGKGVVATGRKLIGATNPLASEPGTIRGDFAIDIGRNVIHGSDAVDSATKEIALWFPDGVVHWQSSLHSWIYE 148          
BLAST of CK935876 vs. ExPASy Swiss-Prot
Match: NDK1_SOYBN (Nucleoside diphosphate kinase 1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 8.037e-65
Identity = 119/147 (80.95%), Postives = 128/147 (87.07%), Query Frame = 1
Query:  112 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGAANPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 552
            EQTFIMIKPDGVQRGL+GEII RFEKKGF LKGLKL+TVDRPFAEKHY DLS+KPFF  L++YI SGPVVAMIWEG+ VV TGR IIGA NPAQS PGTIRGD AI  GRN+IHGSD+VESA KEIALWFP+GP N QSS H WIYE
Sbjct:    3 EQTFIMIKPDGVQRGLIGEIISRFEKKGFYLKGLKLVTVDRPFAEKHYADLSAKPFFSGLVDYIISGPVVAMIWEGKNVVTTGRKIIGATNPAQSEPGTIRGDFAIDIGRNVIHGSDAVESANKEIALWFPEGPANCQSSQHSWIYE 149          
BLAST of CK935876 vs. ExPASy Swiss-Prot
Match: NDK1_PEA (Nucleoside diphosphate kinase 1 OS=Pisum sativum GN=NDPK1 PE=2 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 1.980e-63
Identity = 116/147 (78.91%), Postives = 126/147 (85.71%), Query Frame = 1
Query:  112 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGAANPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 552
            EQTFIMIKPDGVQRGLVGEII RFEKKGF LKGLK + V+R FAEKHY DLS+KPFF  L++YI SGPVVAMIWEG+ VV TGR IIGA NPAQS PGTIRGD AI  GRN+IHGSD+VESA KEIALWFP+G  NW+SSLH WIYE
Sbjct:    3 EQTFIMIKPDGVQRGLVGEIISRFEKKGFYLKGLKFVNVERAFAEKHYADLSAKPFFSGLVDYIISGPVVAMIWEGKNVVTTGRKIIGATNPAQSEPGTIRGDFAIDIGRNVIHGSDAVESANKEIALWFPEGAANWESSLHSWIYE 149          
The following BLAST results are available for this feature:
BLAST of CK935876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK1_ARATH2.260e-6780.41Nucleoside diphosphate kinase 1 OS=Arabidopsis tha... [more]
NDKB_FLABI3.263e-6681.08Nucleoside diphosphate kinase B OS=Flaveria bident... [more]
NDK1_TOBAC7.269e-6681.08Nucleoside diphosphate kinase 1 OS=Nicotiana tabac... [more]
NDKA_FLABI9.494e-6681.08Nucleoside diphosphate kinase A OS=Flaveria bident... [more]
NDK1_MESCR1.240e-6580.41Nucleoside diphosphate kinase 1 OS=Mesembryanthemu... [more]
NDK_HELAN2.115e-6579.73Nucleoside diphosphate kinase OS=Helianthus annuus... [more]
NDK_CAPAN2.762e-6580.41Nucleoside diphosphate kinase OS=Capsicum annuum P... [more]
NDK1_SPIOL4.712e-6579.05Nucleoside diphosphate kinase 1 OS=Spinacia olerac... [more]
NDK1_SOYBN8.037e-6580.95Nucleoside diphosphate kinase 1 OS=Glycine max PE=... [more]
NDK1_PEA1.980e-6378.91Nucleoside diphosphate kinase 1 OS=Pisum sativum G... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004389_F09 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IIIF_F09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935876 ID=CK935876; Name=CK935876; organism=Citrus sinensis; type=EST; length=840bp
GGGGACATATATACTCACTTGCAAAACGGCAAGCTCATTCTCTCGCATGT
GTGCTGTGCTATTTCACTCAATTCTCAAAACAAGTTGGTTTCTCTGAATC
TCAAAGAAATGGAACAAACTTTCATCATGATCAAGCCCGATGGGGTCCAA
AGAGGCCTTGTTGGTGAAATCATCATCAGATTTGAGAAGAAGGGTTTCTC
CTTGAAGGGTTTGAAGCTTATGACTGTGGACCGCCCTTTTGCTGAGAAGC
ACTATGAGGATTTGTCATCGAAGCCTTTCTTTGGTTCTCTGATTGAGTAC
ATTACCTCTGGTCCTGTTGTTGCTATGATTTGGGAGGGTGAAGGTGTTGT
TAAGACTGGCCGCACTATTATTGGAGCCGCCAACCCTGCGCAGTCTGCTC
CTGGAACCATCCGTGGTGACTTGGCTATCGTGACGGGCAGGAATATCATC
CATGGAAGTGACTCAGTTGAGAGTGCCCAGAAAGAAATCGCCTTGTGGTT
CCCTGATGGCCCTATTAACTGGCAGAGCAGCCTTCACCCTTGGATCTATG
AGTAAACTAATGTTTGGTTGAGGAGCCTAATTGTTCCTGCAGTTAGACTT
ATCCCTATCCCTATCCCTATTTCCTTATTTATGGTTACTCCTTGTTGGTG
AACTGTTATGAAGTATTGAGTTAAATTGAGACCAATCCTGGTTATGTTGG
CTGCTTTCATTCTTGTGGTTGCCATATACAATATTTAAGCTTTTTTGTTG
ACTGTATTATGAATTGAGTTTGTTAATGGTTAGCACATGATGGTTGCACT
TTTTATGTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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