CK935880

Overview
NameCK935880
Unique NameCK935880
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK935880 vs. ExPASy Swiss-Prot
Match: ITH5_CUCMA (Inhibitor of trypsin and hageman factor OS=Cucurbita maxima PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.557e-12
Identity = 34/64 (53.12%), Postives = 40/64 (62.50%), Query Frame = 1 
Query:  376 GKSSWPELVGVNGEIAAATIQEENPNVHAIIILEGTPVTQDFRCXXXXXXXXXXXXXXXXPRIG 567
            GKSSWP LVGV G +A A I+ +NPNV A+I+ EGTPVT+DFRC                PRIG
Sbjct:    5 GKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTKDFRCNRVRIWVNKRGLVVSPPRIG 68
The following BLAST results are available for this feature:
BLAST of CK935880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ITH5_CUCMA3.557e-1253.13Inhibitor of trypsin and hageman factor OS=Cucurbi... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004389_E08 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IIIF_E08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935880 ID=CK935880; Name=CK935880; organism=Citrus sinensis; type=EST; length=719bp
GGGGGTCTAACAGCCTTCAAAATAATTGAAAATTAATCAACAATGAAGAA
CACAGTACTAGCACTAGCTTTCTTCGTATTTCTCTTTGCCTTTGCTGCAA
AACCATCTTTGGCTGCTCGTCATGAGCCGTTAGTGCTTCATTCCGATGGC
CAGCAGCTCCTCACGGCTACCAGCAATTGCGATATCGTAACTCAATTTGA
GTGTAATGGTACGTAATTATTATTGAGGACATTATCCTAATAATTACTGG
GTTAATAATACAACTGAGCTAATTTTTTAATATGAGTTAGGTCCATGGAC
TTTTAAAATATGGCCATAATTGGCTGTTGAACAAGTTTTAACAACTTAGT
AATTCTTATATGAAATATAACTGCAGGCAAGAGTTCATGGCCAGAACTGG
TTGGTGTAAACGGGGAGATTGCTGCTGCTACGATACAGGAAGAGAATCCT
AATGTTCATGCAATCATAATACTTGAGGGAACTCCAGTTACACAAGATTT
TCGTTGTGATCGGGTTCGAGTTGTGGTTGACAAATATGAGAAGGTGGTTC
AAGTTCCTCGGATTGGCTGAACTTCGACGATTATCTGCAATCATCATGGC
TGGATGGATGGTCAGGATTAACTGCTTGTTTATAATCACTTAACTATGTA
TTAGTAAAATAAATGAACAAGTAGTGTTGTTTAATAGAACAAAAAAAAAA
AAAAAAAAAAAAAAAAAAA
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